RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 GDAP1L1Q96MZ0 367 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 ZKSCAN3Q9BRR0 538 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 FANCLQ9NW38 375 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 RTEL1Q9NZ71 1219 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 NRBP1Q9UHY1 535 aa16.59■□□□□ 0.25
SMARCA4-207ENST00000541122 I3L4J1 428 aa16.58■□□□□ 0.25
SMARCA4-207ENST00000541122 MRPL12P52815 198 aaKnown RBP16.58■□□□□ 0.25
SMARCA4-207ENST00000541122 LGSNQ5TDP6 509 aa16.58■□□□□ 0.25
SMARCA4-207ENST00000541122 WDR78Q5VTH9 848 aa16.58■□□□□ 0.25
SMARCA4-207ENST00000541122 TYW1BQ6NUM6 668 aa16.58■□□□□ 0.25
SMARCA4-207ENST00000541122 P3H4Q92791 437 aa16.58■□□□□ 0.25
SMARCA4-207ENST00000541122 ACTR5Q9H9F9 607 aaPredicted RBP16.58■□□□□ 0.25
SMARCA4-207ENST00000541122 MCM9Q9NXL9 1143 aa16.58■□□□□ 0.25
SMARCA4-207ENST00000541122 EPHB4P54760 987 aa16.58■□□□□ 0.24
SMARCA4-207ENST00000541122 SLC39A6Q13433 755 aa16.58■□□□□ 0.24
SMARCA4-207ENST00000541122 AMFRQ9UKV5 643 aa16.58■□□□□ 0.24
SMARCA4-207ENST00000541122 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-207ENST00000541122 V9GY48 417 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-207ENST00000541122 GCC2Q8IWJ2 1684 aa16.58■□□□□ 0.24
SMARCA4-207ENST00000541122 PABPN1LA6NDY0 278 aaKnown RBP16.58■□□□□ 0.24
SMARCA4-207ENST00000541122 RPUSD2Q8IZ73 545 aaKnown RBP16.58■□□□□ 0.24
SMARCA4-207ENST00000541122 CTTNBP2NLQ9P2B4 639 aa16.58■□□□□ 0.24
SMARCA4-207ENST00000541122 EPN1Q9Y6I3 576 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-207ENST00000541122 PTPRTO14522 1441 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 RNMTO43148 476 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 SEC31AO94979 1220 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 GAS8O95995 478 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 ATP1A2P50993 1020 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 GUCY2FP51841 1108 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 TRPC3Q13507 836 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 C2CD5Q86YS7 1000 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 PSMB7Q99436 277 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 TRPM2O94759 1503 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 USP19O94966 1318 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 ZNF521Q96K83 1311 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 CCDC169A6NNP5 214 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 RRAGAQ7L523 313 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 CCDC105Q8IYK2 499 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 MAST1Q9Y2H9 1570 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 LRRD1A4D1F6 860 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 C6orf229H3BNL8 230 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 NOSTRINQ8IVI9 506 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 MIGA1Q8NAN2 632 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 FAN1Q9Y2M0 1017 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 MAGEA9P43362 315 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 SDCCAG8Q86SQ7 713 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 CCDC170Q8IYT3 715 aa16.57■□□□□ 0.24
SMARCA4-207ENST00000541122 KDM5AP29375 1690 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 PLBD2Q8NHP8 589 aa16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 SSX2IPQ9Y2D8 614 aa16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 EXOC5O00471 708 aa16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 PNMA6AP0CW24 399 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 UAP1Q16222 522 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 SLC4A8Q2Y0W8 1093 aa16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 MCTP2Q6DN12 878 aa16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 NONOQ15233 471 aaKnown RBP eCLIP16.56■□□□□ 0.249e-8■■■■□ 21.6
SMARCA4-207ENST00000541122 LZTS2Q9BRK4 669 aa16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 STK38LQ9Y2H1 464 aa16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 SBNO1A3KN83 1393 aa16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 HNRNPH2P55795 449 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 FBXO38Q6PIJ6 1188 aa16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 CCDC197Q8NCU1 140 aa16.56■□□□□ 0.24
SMARCA4-207ENST00000541122 KRT15P19012 456 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 TACO1Q9BSH4 297 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 MAK16Q9BXY0 300 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 LSG1Q9H089 658 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 NDUFA8P51970 172 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 STAG1Q8WVM7 1258 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 PDLIM2Q96JY6 352 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 EVI5O60447 810 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 HSPA1LP34931 641 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 PTH1RQ03431 593 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 NCBP1Q09161 790 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 FBXO18Q8NFZ0 1043 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 ZCRB1Q8TBF4 217 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 LRWD1Q9UFC0 647 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 GTPBP6O43824 516 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 GMNNO75496 209 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 WDR44Q5JSH3 913 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 PHKBQ93100 1093 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 DCAF5Q96JK2 942 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 ODF2LQ9ULJ1 636 aa16.55■□□□□ 0.24
SMARCA4-207ENST00000541122 IRS4O14654 1257 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 PPP6R2O75170 966 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 TRIM37O94972 964 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 SARM1Q6SZW1 724 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 ZNF804AQ7Z570 1209 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 CABP7Q86V35 215 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 MPHOSPH6Q99547 160 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 NUF2Q9BZD4 464 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 FAM114A2Q9NRY5 505 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 DENND2AQ9ULE3 1009 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 KRIT1O00522 736 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 TIMM10P62072 90 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 SLC35F6Q8N357 371 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 PARD6BQ9BYG5 372 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 RNF14Q9UBS8 474 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 RABGAP1Q9Y3P9 1069 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms