RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 GTF2IP78347 998 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 LMOD3Q0VAK6 560 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 MTFR1Q15390 333 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 CCL15Q16663 113 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 RNF20Q5VTR2 975 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 FAM43AQ8N2R8 423 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 KCTD17Q8N5Z5 321 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 DEFB123Q8N688 67 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 CCDC191Q8NCU4 936 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 TTC28Q96AY4 2481 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 ZFP42Q96MM3 310 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 COL25A1Q9BXS0 654 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-214ENST00000540865 PPP1R12CQ9BZL4 782 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 ARHGAP39Q9C0H5 1083 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 ELP3Q9H9T3 547 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 DOLKQ9UPQ8 538 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 LAMB2P55268 1798 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 CLRN2A0PK11 232 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 USP17L5A8MUK1 530 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 CHL1O00533 1208 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 LILRA1O75019 489 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 FARP2O94887 1054 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-214ENST00000540865 CCL5P13501 91 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 RFX1P22670 979 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 GRK4P32298 578 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 BMP8BP34820 402 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 ADD1P35611 737 aaKnown RBP5.94□□□□□ -1.46
SNHG1-214ENST00000540865 RIPK4P57078 832 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 FKBP1AP62942 108 aaKnown RBP5.94□□□□□ -1.46
SNHG1-214ENST00000540865 UBXN2AP68543 259 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 DHX9Q08211 1270 aaKnown RBP5.94□□□□□ -1.46
SNHG1-214ENST00000540865 RASA3Q14644 834 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 CFAP100Q494V2 611 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-214ENST00000540865 TXNRD3Q86VQ6 643 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 RAET1EQ8TD07 263 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 ANKRD2Q9GZV1 360 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 STAP2Q9UGK3 403 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 SRRDQ9UH36 339 aa5.94□□□□□ -1.46
SNHG1-214ENST00000540865 SOBPA7XYQ1 873 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 ATP9BO43861 1147 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 CETPP11597 493 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 PSMC4P43686 418 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 GSK3AP49840 483 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 CTSWP56202 376 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 NCOA4Q13772 614 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 TNFAIP1Q13829 316 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 VGLL4Q14135 290 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 KRT24Q2M2I5 525 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 LRIT3Q3SXY7 679 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 C17orf99Q6UX52 265 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.93□□□□□ -1.46
SNHG1-214ENST00000540865 CERS5Q8N5B7 392 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 TTLL11Q8NHH1 800 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 U2AF1L4Q8WU68 220 aaKnown RBP5.93□□□□□ -1.46
SNHG1-214ENST00000540865 CCDC97Q96F63 343 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-214ENST00000540865 PRMT6Q96LA8 375 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-214ENST00000540865 AGBL1Q96MI9 1066 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 MYD88Q99836 296 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 GDF15Q99988 308 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 RNF208Q9H0X6 261 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 VEZTQ9HBM0 779 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 CD209Q9NNX6 404 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 MTMR10Q9NXD2 777 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 CWC25Q9NXE8 425 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-214ENST00000540865 PGPEP1Q9NXJ5 209 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 RIPOR2Q9Y4F9 1068 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 MAFBQ9Y5Q3 323 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-214ENST00000540865 CSADQ9Y600 493 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 TAF1P21675 1872 aa5.93□□□□□ -1.46
SNHG1-214ENST00000540865 MUC3AQ02505 3323 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 BTBD19C9JJ37 291 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 SGPL1O95470 568 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 STAU1O95793 577 aaKnown RBP5.92□□□□□ -1.46
SNHG1-214ENST00000540865 KLRK1P26718 216 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 IGHMBP2P38935 993 aaKnown RBP5.92□□□□□ -1.46
SNHG1-214ENST00000540865 ERVK-9P63128 1117 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 TRIM26Q12899 539 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-214ENST00000540865 SNAPC2Q13487 334 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 USP17L2Q6R6M4 530 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 Q7L0L9 218 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.92□□□□□ -1.46
SNHG1-214ENST00000540865 TEPSINQ96N21 525 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 GREM2Q9H772 168 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 PRDM6Q9NQX0 595 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 BIN2Q9UBW5 565 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-214ENST00000540865 PCDHAC2Q9Y5I4 1007 aa5.92□□□□□ -1.46
SNHG1-214ENST00000540865 LAMA2P24043 3122 aaKnown RBP5.91□□□□□ -1.46
SNHG1-214ENST00000540865 F8W031 263 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-214ENST00000540865 TFRCP02786 760 aaKnown RBP5.91□□□□□ -1.46
SNHG1-214ENST00000540865 VSIG8P0DPA2 414 aa5.91□□□□□ -1.46
SNHG1-214ENST00000540865 IL1R1P14778 569 aa5.91□□□□□ -1.46
SNHG1-214ENST00000540865 CTGFP29279 349 aa5.91□□□□□ -1.46
SNHG1-214ENST00000540865 TMPOP42166 694 aaKnown RBP5.91□□□□□ -1.46
SNHG1-214ENST00000540865 KCNJ4P48050 445 aa5.91□□□□□ -1.46
SNHG1-214ENST00000540865 MAP7D1Q3KQU3 841 aa5.91□□□□□ -1.46
SNHG1-214ENST00000540865 C15orf52Q6ZUT6 534 aaKnown RBP5.91□□□□□ -1.46
SNHG1-214ENST00000540865 ERO1BQ86YB8 467 aa5.91□□□□□ -1.46
SNHG1-214ENST00000540865 JARID2Q92833 1246 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-214ENST00000540865 OSBPL3Q9H4L5 887 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms