RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 PORCNQ9H237 461 aa17.52■□□□□ 0.4
MSRB3-209ENST00000540804 DDX60LQ5H9U9 1706 aaKnown RBP17.52■□□□□ 0.39
MSRB3-209ENST00000540804 MYH1P12882 1939 aa17.51■□□□□ 0.39
MSRB3-209ENST00000540804 CNMDO75829 334 aa17.51■□□□□ 0.39
MSRB3-209ENST00000540804 HABP4Q5JVS0 413 aaKnown RBP17.51■□□□□ 0.39
MSRB3-209ENST00000540804 TMED8Q6PL24 325 aaPredicted RBP17.51■□□□□ 0.39
MSRB3-209ENST00000540804 CLEC10AQ8IUN9 316 aa17.51■□□□□ 0.39
MSRB3-209ENST00000540804 NKX2-3Q8TAU0 364 aa17.51■□□□□ 0.39
MSRB3-209ENST00000540804 DPF3Q92784 378 aa17.51■□□□□ 0.39
MSRB3-209ENST00000540804 CHMP4BQ9H444 224 aaKnown RBP17.51■□□□□ 0.39
MSRB3-209ENST00000540804 A0A1W2PRG0 241 aa17.5■□□□□ 0.39
MSRB3-209ENST00000540804 MPHOSPH10O00566 681 aaKnown RBP17.5■□□□□ 0.39
MSRB3-209ENST00000540804 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
MSRB3-209ENST00000540804 ERVK-9P63128 1117 aa17.5■□□□□ 0.39
MSRB3-209ENST00000540804 ERVK-24P63145 666 aa17.5■□□□□ 0.39
MSRB3-209ENST00000540804 TRIB2Q92519 343 aa17.5■□□□□ 0.39
MSRB3-209ENST00000540804 C12orf42Q96LP6 360 aa17.5■□□□□ 0.39
MSRB3-209ENST00000540804 CABP5Q9NP86 173 aa17.5■□□□□ 0.39
MSRB3-209ENST00000540804 PAK6Q9NQU5 681 aaPredicted RBP17.5■□□□□ 0.39
MSRB3-209ENST00000540804 COLQQ9Y215 455 aaPredicted RBP17.5■□□□□ 0.39
MSRB3-209ENST00000540804 FARP2O94887 1054 aaPredicted RBP17.49■□□□□ 0.39
MSRB3-209ENST00000540804 VCAM1P19320 739 aa17.49■□□□□ 0.39
MSRB3-209ENST00000540804 CATSPERGQ6ZRH7 1159 aa17.49■□□□□ 0.39
MSRB3-209ENST00000540804 KIAA1683Q9H0B3 1180 aa17.49■□□□□ 0.39
MSRB3-209ENST00000540804 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.49■□□□□ 0.39
MSRB3-209ENST00000540804 PUS7LQ9H0K6 701 aaKnown RBP17.49■□□□□ 0.39
MSRB3-209ENST00000540804 NAV1Q8NEY1 1877 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L15C9J2P7 530 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L13C9JLJ4 530 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L11C9JVI0 530 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L18D6R9N7 530 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L22D6RA61 530 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L17D6RBQ6 530 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L19D6RCP7 530 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L20D6RJB6 530 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 AKR1B1P15121 316 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L24Q0WX57 530 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 KIAA1755Q5JYT7 1200 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 DIS3LQ8TF46 1054 aaKnown RBP17.48■□□□□ 0.39
MSRB3-209ENST00000540804 RPAP3Q9H6T3 665 aaPredicted RBP17.48■□□□□ 0.39
MSRB3-209ENST00000540804 BTBD7Q9P203 1132 aa17.48■□□□□ 0.39
MSRB3-209ENST00000540804 HMGCRP04035 888 aa17.47■□□□□ 0.39
MSRB3-209ENST00000540804 CCL14Q16627 93 aa17.47■□□□□ 0.39
MSRB3-209ENST00000540804 GPR142Q7Z601 462 aa17.47■□□□□ 0.39
MSRB3-209ENST00000540804 SIAH1Q8IUQ4 282 aa17.47■□□□□ 0.39
MSRB3-209ENST00000540804 GCC1Q96CN9 775 aa17.47■□□□□ 0.39
MSRB3-209ENST00000540804 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.47■□□□□ 0.39
MSRB3-209ENST00000540804 SLC4A4Q9Y6R1 1079 aa17.47■□□□□ 0.39
MSRB3-209ENST00000540804 PLXNB2O15031 1838 aa17.47■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L12C9JPN9 530 aa17.46■□□□□ 0.39
MSRB3-209ENST00000540804 USP17L21D6R901 530 aa17.46■□□□□ 0.39
MSRB3-209ENST00000540804 USP14P54578 494 aa17.46■□□□□ 0.39
MSRB3-209ENST00000540804 UBE3CQ15386 1083 aa17.46■□□□□ 0.39
MSRB3-209ENST00000540804 USP6NLQ92738 828 aa17.46■□□□□ 0.39
MSRB3-209ENST00000540804 NUDT12Q9BQG2 462 aa17.46■□□□□ 0.39
MSRB3-209ENST00000540804 CRISPLD2Q9H0B8 497 aa17.46■□□□□ 0.39
MSRB3-209ENST00000540804 DCTPP1Q9H773 170 aa17.46■□□□□ 0.39
MSRB3-209ENST00000540804 PCDHB15Q9Y5E8 787 aa17.46■□□□□ 0.39
MSRB3-209ENST00000540804 SPDYE16A6NNV3 312 aaPredicted RBP17.45■□□□□ 0.38
MSRB3-209ENST00000540804 MAPK4P31152 587 aa17.45■□□□□ 0.38
MSRB3-209ENST00000540804 MORN1Q5T089 497 aa17.45■□□□□ 0.38
MSRB3-209ENST00000540804 C12orf60Q5U649 245 aa17.45■□□□□ 0.38
MSRB3-209ENST00000540804 PLEKHH3Q7Z736 793 aa17.45■□□□□ 0.38
MSRB3-209ENST00000540804 CCAR1Q8IX12 1150 aaKnown RBP17.45■□□□□ 0.38
MSRB3-209ENST00000540804 STK11IPQ8N1F8 1099 aa17.45■□□□□ 0.38
MSRB3-209ENST00000540804 PAWRQ96IZ0 340 aaKnown RBP17.45■□□□□ 0.38
MSRB3-209ENST00000540804 ATP8A2Q9NTI2 1148 aa17.45■□□□□ 0.38
MSRB3-209ENST00000540804 ECHDC1Q9NTX5 307 aa17.45■□□□□ 0.38
MSRB3-209ENST00000540804 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
MSRB3-209ENST00000540804 CDK8P49336 464 aa17.44■□□□□ 0.38
MSRB3-209ENST00000540804 WDR78Q5VTH9 848 aa17.44■□□□□ 0.38
MSRB3-209ENST00000540804 CTR9Q6PD62 1173 aa17.44■□□□□ 0.38
MSRB3-209ENST00000540804 CHRDL2Q6WN34 429 aa17.44■□□□□ 0.38
MSRB3-209ENST00000540804 OTUD7AQ8TE49 926 aaPredicted RBP17.44■□□□□ 0.38
MSRB3-209ENST00000540804 HMX1Q9NP08 348 aaPredicted RBP17.44■□□□□ 0.38
MSRB3-209ENST00000540804 RABGAP1Q9Y3P9 1069 aa17.44■□□□□ 0.38
MSRB3-209ENST00000540804 RPTORQ8N122 1335 aa17.44■□□□□ 0.38
MSRB3-209ENST00000540804 DOCK3Q8IZD9 2030 aa17.43■□□□□ 0.38
MSRB3-209ENST00000540804 CACNB2Q08289 660 aaPredicted RBP17.43■□□□□ 0.38
MSRB3-209ENST00000540804 TMEM179Q6ZVK1 233 aa17.43■□□□□ 0.38
MSRB3-209ENST00000540804 SPICE1Q8N0Z3 855 aa17.43■□□□□ 0.38
MSRB3-209ENST00000540804 GTF3C2Q8WUA4 911 aaPredicted RBP17.43■□□□□ 0.38
MSRB3-209ENST00000540804 SOCS4Q8WXH5 440 aa17.43■□□□□ 0.38
MSRB3-209ENST00000540804 OSBP2Q969R2 916 aa17.43■□□□□ 0.38
MSRB3-209ENST00000540804 HTATIP2Q9BUP3 242 aa17.43■□□□□ 0.38
MSRB3-209ENST00000540804 CWC22Q9HCG8 908 aaKnown RBP17.43■□□□□ 0.38
MSRB3-209ENST00000540804 FLRT1Q9NZU1 646 aa17.43■□□□□ 0.38
MSRB3-209ENST00000540804 PCDH10Q9P2E7 1040 aa17.43■□□□□ 0.38
MSRB3-209ENST00000540804 SWAP70Q9UH65 585 aa17.43■□□□□ 0.38
MSRB3-209ENST00000540804 ZKSCAN1P17029 563 aaPredicted RBP17.42■□□□□ 0.38
MSRB3-209ENST00000540804 CCND3P30281 292 aaPredicted RBP17.42■□□□□ 0.38
MSRB3-209ENST00000540804 MNX1P50219 401 aaPredicted RBP17.42■□□□□ 0.38
MSRB3-209ENST00000540804 MAP3K21Q5TCX8 1036 aa17.42■□□□□ 0.38
MSRB3-209ENST00000540804 SAMD1Q6SPF0 538 aaPredicted RBP17.42■□□□□ 0.38
MSRB3-209ENST00000540804 STRBPQ96SI9 672 aaKnown RBP17.42■□□□□ 0.38
MSRB3-209ENST00000540804 TANGO6Q9C0B7 1094 aa17.42■□□□□ 0.38
MSRB3-209ENST00000540804 XRCC5P13010 732 aaKnown RBP17.41■□□□□ 0.38
MSRB3-209ENST00000540804 RGS2P41220 211 aa17.41■□□□□ 0.38
MSRB3-209ENST00000540804 FXR1P51114 621 aaKnown RBP eCLIP17.41■□□□□ 0.38
MSRB3-209ENST00000540804 ICA1Q05084 483 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms