RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 MIPEPQ99797 713 aa5.98□□□□□ -1.45
MDM2-226ENST00000540352 DPH2Q9BQC3 489 aaPredicted RBP5.98□□□□□ -1.45
MDM2-226ENST00000540352 PLCD4Q9BRC7 762 aa5.98□□□□□ -1.45
MDM2-226ENST00000540352 FOXQ1Q9C009 403 aa5.98□□□□□ -1.45
MDM2-226ENST00000540352 PRDM10Q9NQV6 1147 aa5.98□□□□□ -1.45
MDM2-226ENST00000540352 UBP1Q9NZI7 540 aa5.98□□□□□ -1.45
MDM2-226ENST00000540352 KLHL3Q9UH77 587 aa5.98□□□□□ -1.45
MDM2-226ENST00000540352 ZHX1Q9UKY1 873 aaPredicted RBP5.98□□□□□ -1.45
MDM2-226ENST00000540352 HDAC5Q9UQL6 1122 aa5.98□□□□□ -1.45
MDM2-226ENST00000540352 DHX57Q6P158 1386 aaKnown RBP5.97□□□□□ -1.45
MDM2-226ENST00000540352 COBLO75128 1261 aa5.97□□□□□ -1.45
MDM2-226ENST00000540352 LEFTY1O75610 366 aa5.97□□□□□ -1.45
MDM2-226ENST00000540352 IRX6P78412 446 aaPredicted RBP5.97□□□□□ -1.45
MDM2-226ENST00000540352 MLECQ14165 292 aa5.97□□□□□ -1.45
MDM2-226ENST00000540352 NKG7Q16617 165 aa5.97□□□□□ -1.45
MDM2-226ENST00000540352 PRAMEF13Q5VWM6 474 aa5.97□□□□□ -1.45
MDM2-226ENST00000540352 Q8N3U1 123 aa5.97□□□□□ -1.45
MDM2-226ENST00000540352 FAM13CQ8NE31 585 aa5.97□□□□□ -1.45
MDM2-226ENST00000540352 DUSP23Q9BVJ7 150 aa5.97□□□□□ -1.45
MDM2-226ENST00000540352 BRMS1Q9HCU9 246 aa5.97□□□□□ -1.45
MDM2-226ENST00000540352 ROBO2Q9HCK4 1378 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 SMARCA2P51531 1590 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 PRR19A6NJB7 356 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 HTR3BO95264 441 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 TCF3P15923 654 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 ZSCAN20P17040 1043 aaPredicted RBP5.96□□□□□ -1.46
MDM2-226ENST00000540352 CRKP46108 304 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 SETQ01105 290 aaPredicted RBP5.96□□□□□ -1.46
MDM2-226ENST00000540352 SLBPQ14493 270 aaKnown RBP eCLIP5.96□□□□□ -1.46
MDM2-226ENST00000540352 LCE3BQ5TA77 95 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 METTL16Q86W50 562 aaKnown RBP5.96□□□□□ -1.46
MDM2-226ENST00000540352 NKD1Q969G9 470 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 TMEM87BQ96K49 555 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 CCSER2Q9H7U1 834 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 KCNQ5Q9NR82 932 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 PCMTD2Q9NV79 361 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 GEMIN8Q9NWZ8 242 aaKnown RBP5.96□□□□□ -1.46
MDM2-226ENST00000540352 TJP2Q9UDY2 1190 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 KCNG1Q9UIX4 513 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 DDX41Q9UJV9 622 aaKnown RBP5.96□□□□□ -1.46
MDM2-226ENST00000540352 ADAM30Q9UKF2 790 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 TPX2Q9ULW0 747 aaKnown RBP5.96□□□□□ -1.46
MDM2-226ENST00000540352 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.96□□□□□ -1.46
MDM2-226ENST00000540352 POLR3KQ9Y2Y1 108 aaPredicted RBP5.96□□□□□ -1.46
MDM2-226ENST00000540352 PCDHB14Q9Y5E9 798 aa5.96□□□□□ -1.46
MDM2-226ENST00000540352 GREM1O60565 184 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 APPP05067 770 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 FOSL1P15407 271 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 YARSP54577 528 aaKnown RBP5.95□□□□□ -1.46
MDM2-226ENST00000540352 CHMP4BP1P59074 171 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 RACK1P63244 317 aaKnown RBP5.95□□□□□ -1.46
MDM2-226ENST00000540352 INTS5Q6P9B9 1019 aaKnown RBP5.95□□□□□ -1.46
MDM2-226ENST00000540352 GK5Q6ZS86 529 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 MRPL41Q8IXM3 137 aaKnown RBP5.95□□□□□ -1.46
MDM2-226ENST00000540352 MFSD2AQ8NA29 543 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 ACSF2Q96CM8 615 aaPredicted RBP5.95□□□□□ -1.46
MDM2-226ENST00000540352 CCDC94Q9BW85 323 aaPredicted RBP5.95□□□□□ -1.46
MDM2-226ENST00000540352 NT5C1AQ9BXI3 368 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 LRRC3Q9BY71 257 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 TSPYL1Q9H0U9 437 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 REV1Q9UBZ9 1251 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 GTF2IRD1Q9UHL9 959 aa5.95□□□□□ -1.46
MDM2-226ENST00000540352 ZBED9Q6R2W3 1325 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 FSD2A1L4K1 749 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 DYNC1I1O14576 645 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 CST3P01034 146 aaPredicted RBP5.94□□□□□ -1.46
MDM2-226ENST00000540352 ITIH2P19823 946 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 ERCC5P28715 1186 aaPredicted RBP5.94□□□□□ -1.46
MDM2-226ENST00000540352 HOXA10P31260 410 aaPredicted RBP5.94□□□□□ -1.46
MDM2-226ENST00000540352 ZNF165P49910 485 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 RALBP1Q15311 655 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 SLC6A19Q695T7 634 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 MCATQ8IVS2 390 aaKnown RBP5.94□□□□□ -1.46
MDM2-226ENST00000540352 FAM181AQ8N9Y4 354 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 EAF1Q96JC9 268 aaPredicted RBP5.94□□□□□ -1.46
MDM2-226ENST00000540352 KRTAP9-9Q9BYP9 154 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 PRDM5Q9NQX1 630 aaPredicted RBP5.94□□□□□ -1.46
MDM2-226ENST00000540352 RNF123Q5XPI4 1314 aa5.94□□□□□ -1.46
MDM2-226ENST00000540352 PHLDB1Q86UU1 1377 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 GNAT3A8MTJ3 354 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 VGLL3A8MV65 326 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 OFD1O75665 1012 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 SLITRK5O94991 958 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 CAP2P40123 477 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 TNNI2P48788 182 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 PAK2Q13177 524 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 LRP8Q14114 963 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 CC2D1BQ5T0F9 858 aaKnown RBP5.93□□□□□ -1.46
MDM2-226ENST00000540352 FBXW10Q5XX13 1052 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 LETMD1Q6P1Q0 360 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 PHACTR4Q8IZ21 702 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 PUS7Q96PZ0 661 aaKnown RBP5.93□□□□□ -1.46
MDM2-226ENST00000540352 IGSF5Q9NSI5 407 aa5.93□□□□□ -1.46
MDM2-226ENST00000540352 CEP162Q5TB80 1403 aa5.92□□□□□ -1.46
MDM2-226ENST00000540352 CUX2O14529 1486 aa5.92□□□□□ -1.46
MDM2-226ENST00000540352 UPK3BL1B0FP48 263 aa5.92□□□□□ -1.46
MDM2-226ENST00000540352 UPK3BL2E5RIL1 263 aa5.92□□□□□ -1.46
MDM2-226ENST00000540352 CD97P48960 835 aa5.92□□□□□ -1.46
MDM2-226ENST00000540352 MRE11P49959 708 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms