RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 DEKP35659 375 aaKnown RBP7.32□□□□□ -1.24
CPSF7-219ENST00000539952 TIMM10P62072 90 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 ERVK-9P63128 1117 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 ERVK-24P63145 666 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 ATP2B2Q01814 1243 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 MECOMQ03112 1051 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 MAP2K5Q13163 448 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 SHHQ15465 462 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 IER5LQ5T953 404 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 TMEM92Q6UXU6 159 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 MRPL50Q8N5N7 158 aaKnown RBP7.32□□□□□ -1.24
CPSF7-219ENST00000539952 APBA2Q99767 749 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 DDX20Q9UHI6 824 aaKnown RBP7.32□□□□□ -1.24
CPSF7-219ENST00000539952 RABGAP1Q9Y3P9 1069 aa7.32□□□□□ -1.24
CPSF7-219ENST00000539952 SLC15A5A6NIM6 579 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 USP17L15C9J2P7 530 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 USP17L13C9JLJ4 530 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 USP17L11C9JVI0 530 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 USP17L18D6R9N7 530 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 USP17L22D6RA61 530 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 USP17L17D6RBQ6 530 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 USP17L19D6RCP7 530 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 USP17L20D6RJB6 530 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 TNFRSF10AO00220 468 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 STRNO43815 780 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 IGSF3O75054 1194 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 BAG3O95817 575 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 PLCG2P16885 1265 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 PTPREP23469 700 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 CNGA1P29973 690 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 RTP1P59025 263 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 USP17L24Q0WX57 530 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 MTMR2Q13614 643 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 NBR1Q14596 966 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 MVPQ14764 893 aaKnown RBP7.31□□□□□ -1.24
CPSF7-219ENST00000539952 CCL14Q16627 93 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 TPRNQ4KMQ1 711 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 CCDC184Q52MB2 194 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 TJAP1Q5JTD0 557 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 USP17L2Q6R6M4 530 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 SLC39A5Q6ZMH5 540 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 SNX27Q96L92 541 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 NOL10Q9BSC4 688 aaKnown RBP7.31□□□□□ -1.24
CPSF7-219ENST00000539952 TRIM34Q9BYJ4 488 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 SIL1Q9H173 461 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 OCEL1Q9H607 264 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 TXNRD2Q9NNW7 524 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 COPRSQ9NQ92 184 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-219ENST00000539952 IVNS1ABPQ9Y6Y0 642 aa7.31□□□□□ -1.24
CPSF7-219ENST00000539952 LAMA3Q16787 3333 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-219ENST00000539952 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-219ENST00000539952 FAM196BA6NMK8 535 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 HOXC6P09630 235 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 UBTFL1P0CB47 393 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-219ENST00000539952 FOSL2P15408 326 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 USP14P54578 494 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 PPP4CP60510 307 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 RASGRF1Q13972 1273 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 RRP1BQ14684 758 aaKnown RBP7.3□□□□□ -1.24
CPSF7-219ENST00000539952 C1orf53Q5VUE5 145 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 ATF7IPQ6VMQ6 1270 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 METTL16Q86W50 562 aaKnown RBP7.3□□□□□ -1.24
CPSF7-219ENST00000539952 MYLIPQ8WY64 445 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 BADQ92934 168 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 NSUN4Q96CB9 384 aaKnown RBP7.3□□□□□ -1.24
CPSF7-219ENST00000539952 XAGE2Q96GT9 111 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 PAGR1Q9BTK6 254 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 PORCNQ9H237 461 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 SLC5A4Q9NY91 659 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 RAI14Q9P0K7 980 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 ATP11BQ9Y2G3 1177 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 TACC3Q9Y6A5 838 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 ALPK3Q96L96 1907 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 A0A1B0GUL6 1792 aa7.3□□□□□ -1.24
CPSF7-219ENST00000539952 A0A1B0GUL7 405 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 KBTBD13C9JR72 458 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 MFSD10Q14728 455 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 C9orf50Q5SZB4 431 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 GORABQ5T7V8 394 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 CATSPERGQ6ZRH7 1159 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 DPP9Q86TI2 863 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 TEX11Q8IYF3 940 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 CRACR2BQ8N4Y2 399 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-219ENST00000539952 SPATA5Q8NB90 893 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 DDRGK1Q96HY6 314 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 NEUROD6Q96NK8 337 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 TTYH1Q9H313 450 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-219ENST00000539952 EMILIN3Q9NT22 766 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 HOXC10Q9NYD6 342 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 LRP2BPQ9P2M1 347 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 METRNQ9UJH8 293 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 RFX7Q2KHR2 1363 aa7.29□□□□□ -1.24
CPSF7-219ENST00000539952 COL2A1P02458 1487 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-219ENST00000539952 PEX10O60683 326 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 UQCRFS1P1P0C7P4 283 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 ADORA1P30542 326 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 DSG2Q14126 1118 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 SNX17Q15036 470 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms