RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 CTNND1O60716 968 aaKnown RBP13.7□□□□□ -0.22
VTN-202ENST00000539746 DEXIO95424 95 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 CYP2D6P10635 497 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 CPA1P15085 419 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 IFNAR1P17181 557 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 MAP3K10Q02779 954 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 TBC1D10BQ4KMP7 808 aaPredicted RBP13.7□□□□□ -0.22
VTN-202ENST00000539746 LARP1BQ659C4 914 aaKnown RBP13.7□□□□□ -0.22
VTN-202ENST00000539746 ATL3Q6DD88 541 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 DCAF4Q8WV16 495 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 RNF26Q9BY78 433 aaPredicted RBP13.7□□□□□ -0.22
VTN-202ENST00000539746 GLT8D2Q9H1C3 349 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 PICK1Q9NRD5 415 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 MTMR4Q9NYA4 1195 aa13.7□□□□□ -0.22
VTN-202ENST00000539746 SEC63Q9UGP8 760 aaKnown RBP13.7□□□□□ -0.22
VTN-202ENST00000539746 MYH1P12882 1939 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 PARP1P09874 1014 aaKnown RBP13.69□□□□□ -0.22
VTN-202ENST00000539746 GJB2P29033 226 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 NOVP48745 357 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 USP14P54578 494 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 ICA1Q05084 483 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 STK3Q13188 491 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 CHST3Q7LGC8 479 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 NUP133Q8WUM0 1156 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 DYNLL2Q96FJ2 89 aa13.69□□□□□ -0.22
VTN-202ENST00000539746 ZNF646O15015 1829 aaPredicted RBP13.69□□□□□ -0.22
VTN-202ENST00000539746 PTPDC1A2A3K4 754 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 DDTLA6NHG4 134 aaPredicted RBP13.68□□□□□ -0.22
VTN-202ENST00000539746 STX6O43752 255 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 CD2BP2O95400 341 aaKnown RBP13.68□□□□□ -0.22
VTN-202ENST00000539746 VEGFAP15692 232 aaPredicted RBP13.68□□□□□ -0.22
VTN-202ENST00000539746 SHMT1P34896 483 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 EPHX2P34913 555 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 IREB2P48200 963 aaKnown RBP13.68□□□□□ -0.22
VTN-202ENST00000539746 SCRN1Q12765 414 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 GNL2Q13823 731 aaKnown RBP13.68□□□□□ -0.22
VTN-202ENST00000539746 FAM47AQ5JRC9 791 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 ANGEL2Q5VTE6 544 aaKnown RBP13.68□□□□□ -0.22
VTN-202ENST00000539746 MCTP2Q6DN12 878 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 GALNT17Q6IS24 598 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 GMCL1P1Q8NEA9 526 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 MKL1Q969V6 931 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 TCEANC2Q96MN5 208 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 LRRC2Q9BYS8 371 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 GGA3Q9NZ52 723 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 TAF6LQ9Y6J9 622 aa13.68□□□□□ -0.22
VTN-202ENST00000539746 DDX11L8A8MPP1 907 aa13.67□□□□□ -0.22
VTN-202ENST00000539746 DDNO94850 711 aaPredicted RBP13.67□□□□□ -0.22
VTN-202ENST00000539746 FDX1P10109 184 aa13.67□□□□□ -0.22
VTN-202ENST00000539746 NCLP19338 710 aaKnown RBP13.67□□□□□ -0.22
VTN-202ENST00000539746 CALML3P27482 149 aa13.67□□□□□ -0.22
VTN-202ENST00000539746 CDC37L1Q7L3B6 337 aa13.67□□□□□ -0.22
VTN-202ENST00000539746 SAMD7Q7Z3H4 446 aa13.67□□□□□ -0.22
VTN-202ENST00000539746 STK11IPQ8N1F8 1099 aa13.67□□□□□ -0.22
VTN-202ENST00000539746 SMARCC2Q8TAQ2 1214 aa13.67□□□□□ -0.22
VTN-202ENST00000539746 RBM46Q8TBY0 533 aaKnown RBP13.67□□□□□ -0.22
VTN-202ENST00000539746 LPAR1Q92633 364 aa13.67□□□□□ -0.22
VTN-202ENST00000539746 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
VTN-202ENST00000539746 FMNL1O95466 1100 aaPredicted RBP13.66□□□□□ -0.22
VTN-202ENST00000539746 CAP2P40123 477 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 CACNB3P54284 484 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 FKBP1BP68106 108 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 TROAPQ12815 778 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 GRM4Q14833 912 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 BRAPQ7Z569 592 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 BICD2Q8TD16 824 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 RRP36Q96EU6 259 aaKnown RBP13.66□□□□□ -0.22
VTN-202ENST00000539746 CEP95Q96GE4 821 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 C8orf76Q96K31 380 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 TMEM47Q9BQJ4 181 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 ZKSCAN3Q9BRR0 538 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 TMEM39BQ9GZU3 492 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 SH3GLB2Q9NR46 395 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 CSADQ9Y600 493 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 CNTNAP1P78357 1384 aa13.66□□□□□ -0.22
VTN-202ENST00000539746 BAZ2AQ9UIF9 1905 aaKnown RBP13.66□□□□□ -0.22
VTN-202ENST00000539746 SCN4AP35499 1836 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 IGKV6D-41A0A0C4DH26 115 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 PRPF3O43395 683 aaKnown RBP13.65□□□□□ -0.22
VTN-202ENST00000539746 CCT2P78371 535 aaKnown RBP13.65□□□□□ -0.22
VTN-202ENST00000539746 RAB3GAP1Q15042 981 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 ARMC9Q7Z3E5 817 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 KRT26Q7Z3Y9 468 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 NSUN7Q8NE18 718 aaKnown RBP13.65□□□□□ -0.22
VTN-202ENST00000539746 CHURC1Q8WUH1 139 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 FEZ1Q99689 392 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 SPZ1Q9BXG8 430 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 CLIP2Q9UDT6 1046 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 PGAP2Q9UHJ9 254 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 CFAP45Q9UL16 551 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 BRPF3Q9ULD4 1205 aa13.65□□□□□ -0.22
VTN-202ENST00000539746 SBF1O95248 1867 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 ZSCAN22P10073 491 aaPredicted RBP13.64□□□□□ -0.23
VTN-202ENST00000539746 AKR1B1P15121 316 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms