RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TRIM65Q6PJ69 517 aa16.08■□□□□ 0.16
UBE3B-210ENST00000539599 CREBRFQ8IUR6 639 aa16.08■□□□□ 0.16
UBE3B-210ENST00000539599 REXO1L1PQ8IX06 675 aa16.08■□□□□ 0.16
UBE3B-210ENST00000539599 RASGRP4Q8TDF6 673 aa16.08■□□□□ 0.16
UBE3B-210ENST00000539599 ZNF446Q9NWS9 450 aa16.08■□□□□ 0.16
UBE3B-210ENST00000539599 SRPRBQ9Y5M8 271 aaKnown RBP16.08■□□□□ 0.16
UBE3B-210ENST00000539599 MYH6P13533 1939 aa16.08■□□□□ 0.16
UBE3B-210ENST00000539599 MECOMQ03112 1051 aa16.08■□□□□ 0.16
UBE3B-210ENST00000539599 MORC3Q14149 939 aa16.08■□□□□ 0.16
UBE3B-210ENST00000539599 KARSQ15046 597 aaKnown RBP16.08■□□□□ 0.16
UBE3B-210ENST00000539599 SRBD1Q8N5C6 995 aaKnown RBP16.08■□□□□ 0.16
UBE3B-210ENST00000539599 RNF41Q9H4P4 317 aaPredicted RBP16.08■□□□□ 0.16
UBE3B-210ENST00000539599 TROAPQ12815 778 aa16.07■□□□□ 0.16
UBE3B-210ENST00000539599 NPY5RQ15761 445 aa16.07■□□□□ 0.16
UBE3B-210ENST00000539599 WDR24Q96S15 920 aa16.07■□□□□ 0.16
UBE3B-210ENST00000539599 MAPK8IP1Q9UQF2 711 aa16.07■□□□□ 0.16
UBE3B-210ENST00000539599 URI1O94763 535 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-210ENST00000539599 GPKOWQ92917 476 aaPredicted RBP eCLIP16.07■□□□□ 0.167e-6■■■■■ 33.4
UBE3B-210ENST00000539599 CDC5LQ99459 802 aaKnown RBP16.07■□□□□ 0.16
UBE3B-210ENST00000539599 ZNF804BA4D1E1 1349 aa16.07■□□□□ 0.16
UBE3B-210ENST00000539599 CACNA1SQ13698 1873 aa16.07■□□□□ 0.16
UBE3B-210ENST00000539599 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
UBE3B-210ENST00000539599 SARSP49591 514 aaKnown RBP16.06■□□□□ 0.16
UBE3B-210ENST00000539599 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
UBE3B-210ENST00000539599 PIK3AP1Q6ZUJ8 805 aa16.06■□□□□ 0.16
UBE3B-210ENST00000539599 TC2NQ8N9U0 490 aa16.06■□□□□ 0.16
UBE3B-210ENST00000539599 ERO1AQ96HE7 468 aa16.06■□□□□ 0.16
UBE3B-210ENST00000539599 PHF20Q9BVI0 1012 aa16.06■□□□□ 0.16
UBE3B-210ENST00000539599 CGNQ9P2M7 1197 aaKnown RBP16.06■□□□□ 0.16
UBE3B-210ENST00000539599 PSDA5PKW4 1024 aaPredicted RBP16.06■□□□□ 0.16
UBE3B-210ENST00000539599 ZNF18P17022 549 aa16.06■□□□□ 0.16
UBE3B-210ENST00000539599 KRT2P35908 639 aa16.06■□□□□ 0.16
UBE3B-210ENST00000539599 AK7Q96M32 723 aa16.06■□□□□ 0.16
UBE3B-210ENST00000539599 CCDC196A0A1B0GTZ2 297 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 USP17L8P0C7I0 530 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 MCM7P33993 719 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 CAVIN4Q5BKX8 364 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 CATIPQ7Z7H3 387 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 NSUN4Q96CB9 384 aaKnown RBP16.05■□□□□ 0.16
UBE3B-210ENST00000539599 DYNLL2Q96FJ2 89 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 CPVLQ9H3G5 476 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 PPP2R2CQ9Y2T4 447 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 COL14A1Q05707 1796 aaKnown RBP16.05■□□□□ 0.16
UBE3B-210ENST00000539599 SOWAHDA6NJG2 315 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 CBFA2T2O43439 604 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 TFRCP02786 760 aaKnown RBP16.05■□□□□ 0.16
UBE3B-210ENST00000539599 ETF1P62495 437 aaKnown RBP16.05■□□□□ 0.16
UBE3B-210ENST00000539599 PTGDRQ13258 359 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 GRIK5Q16478 980 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 IL17AQ16552 155 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 PAGE5Q96GU1 130 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 RNF26Q9BY78 433 aaPredicted RBP16.05■□□□□ 0.16
UBE3B-210ENST00000539599 DDX41Q9UJV9 622 aaKnown RBP16.05■□□□□ 0.16
UBE3B-210ENST00000539599 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.05■□□□□ 0.16
UBE3B-210ENST00000539599 PLCH1Q4KWH8 1693 aa16.05■□□□□ 0.16
UBE3B-210ENST00000539599 NID2Q14112 1375 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 PLIN2Q99541 437 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 BAG1Q99933 345 aaPredicted RBP16.04■□□□□ 0.16
UBE3B-210ENST00000539599 CARD6Q9BX69 1037 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 CCT6AP40227 531 aaKnown RBP16.04■□□□□ 0.16
UBE3B-210ENST00000539599 DMTNQ08495 405 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 L2HGDHQ9H9P8 463 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 DCP1AQ9NPI6 582 aaPredicted RBP16.04■□□□□ 0.16
UBE3B-210ENST00000539599 KCND1Q9NSA2 647 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 DUOX1Q9NRD9 1551 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 CNTNAP5Q8WYK1 1306 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 ROBO1Q9Y6N7 1651 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 ARHGAP29Q52LW3 1261 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 SLC44A5Q8NCS7 719 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 ZNF397Q8NF99 534 aaPredicted RBP16.04■□□□□ 0.16
UBE3B-210ENST00000539599 EEF2KMTQ96G04 330 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 ZSWIM4Q9H7M6 989 aa16.04■□□□□ 0.16
UBE3B-210ENST00000539599 MRPL44Q9H9J2 332 aaKnown RBP16.04■□□□□ 0.16
UBE3B-210ENST00000539599 TBX2Q13207 712 aaPredicted RBP16.03■□□□□ 0.16
UBE3B-210ENST00000539599 SYCP1Q15431 976 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 IQCA1Q86XH1 822 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 TMTC2Q8N394 836 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 STAG2Q8N3U4 1231 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 GNL3LQ9NVN8 582 aaKnown RBP16.03■□□□□ 0.16
UBE3B-210ENST00000539599 BSDC1Q9NW68 430 aaPredicted RBP16.03■□□□□ 0.16
UBE3B-210ENST00000539599 FAM205AQ6ZU69 1335 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 PP2D1A8MPX8 630 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 GNG11P61952 73 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 TTC38Q5R3I4 469 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 NT5DC1Q5TFE4 455 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 SPECC1LQ69YQ0 1117 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 TMTC3Q6ZXV5 915 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 MTRQ99707 1265 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 ANAPC4Q9UJX5 808 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 CTNND2Q9UQB3 1225 aa16.03■□□□□ 0.16
UBE3B-210ENST00000539599 RTL9Q8NET4 1388 aa16.02■□□□□ 0.16
UBE3B-210ENST00000539599 SEC31AO94979 1220 aaKnown RBP16.02■□□□□ 0.16
UBE3B-210ENST00000539599 ABL1P00519 1130 aa16.02■□□□□ 0.16
UBE3B-210ENST00000539599 DIXDC1Q155Q3 683 aa16.02■□□□□ 0.16
UBE3B-210ENST00000539599 LZTFL1Q9NQ48 299 aa16.02■□□□□ 0.16
UBE3B-210ENST00000539599 OGFRQ9NZT2 677 aa16.02■□□□□ 0.16
UBE3B-210ENST00000539599 PARP3Q9Y6F1 533 aa16.02■□□□□ 0.16
UBE3B-210ENST00000539599 XDHP47989 1333 aa16.02■□□□□ 0.15
UBE3B-210ENST00000539599 PRPF3O43395 683 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms