RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
LEMD3-202ENST00000539442 EPHX2P34913 555 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 RCAN1P53805 252 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 SEC23AQ15436 765 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 FAM47AQ5JRC9 791 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 DGKHQ86XP1 1220 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 ZC3H15Q8WU90 426 aaKnown RBP12.5□□□□□ -0.41
LEMD3-202ENST00000539442 HOOK2Q96ED9 719 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 INTS4Q96HW7 963 aaKnown RBP12.5□□□□□ -0.41
LEMD3-202ENST00000539442 TMEM39BQ9GZU3 492 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 WDR90Q96KV7 1748 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 SIPA1L1O43166 1804 aa12.5□□□□□ -0.41
LEMD3-202ENST00000539442 SCN4AP35499 1836 aa12.49□□□□□ -0.41
LEMD3-202ENST00000539442 ASTN2O75129 1339 aaPredicted RBP12.49□□□□□ -0.41
LEMD3-202ENST00000539442 KLF18A0A0U1RQI7 1052 aa12.49□□□□□ -0.41
LEMD3-202ENST00000539442 CCDC69A6NI79 296 aa12.49□□□□□ -0.41
LEMD3-202ENST00000539442 MAP3K10Q02779 954 aa12.49□□□□□ -0.41
LEMD3-202ENST00000539442 APOBRQ0VD83 1088 aa12.49□□□□□ -0.41
LEMD3-202ENST00000539442 ME3Q16798 604 aa12.49□□□□□ -0.41
LEMD3-202ENST00000539442 NFXL1Q6ZNB6 911 aa12.49□□□□□ -0.41
LEMD3-202ENST00000539442 PNMA8AQ86V59 439 aaPredicted RBP12.49□□□□□ -0.41
LEMD3-202ENST00000539442 ENAHQ8N8S7 591 aaPredicted RBP12.49□□□□□ -0.41
LEMD3-202ENST00000539442 ANKS1AQ92625 1134 aa12.49□□□□□ -0.41
LEMD3-202ENST00000539442 TEPSINQ96N21 525 aa12.49□□□□□ -0.41
LEMD3-202ENST00000539442 ZKSCAN3Q9BRR0 538 aa12.49□□□□□ -0.41
LEMD3-202ENST00000539442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.49□□□□□ -0.41
LEMD3-202ENST00000539442 NID2Q14112 1375 aa12.48□□□□□ -0.41
LEMD3-202ENST00000539442 PFKFB2O60825 505 aa12.48□□□□□ -0.41
LEMD3-202ENST00000539442 LARGE1O95461 756 aa12.48□□□□□ -0.41
LEMD3-202ENST00000539442 PDIA3P30101 505 aaKnown RBP12.48□□□□□ -0.41
LEMD3-202ENST00000539442 NOVP48745 357 aa12.48□□□□□ -0.41
LEMD3-202ENST00000539442 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
LEMD3-202ENST00000539442 CERKLQ49MI3 558 aaPredicted RBP12.48□□□□□ -0.41
LEMD3-202ENST00000539442 IFIT1BQ5T764 474 aaKnown RBP12.48□□□□□ -0.41
LEMD3-202ENST00000539442 APOA5Q6Q788 366 aa12.48□□□□□ -0.41
LEMD3-202ENST00000539442 SYNE3Q6ZMZ3 975 aa12.48□□□□□ -0.41
LEMD3-202ENST00000539442 GTF3C6Q969F1 213 aa12.48□□□□□ -0.41
LEMD3-202ENST00000539442 DCPSQ96C86 337 aaKnown RBP12.48□□□□□ -0.41
LEMD3-202ENST00000539442 LARP6Q9BRS8 491 aaKnown RBP12.48□□□□□ -0.41
LEMD3-202ENST00000539442 SLKQ9H2G2 1235 aaPredicted RBP12.48□□□□□ -0.41
LEMD3-202ENST00000539442 TAF1DQ9H5J8 278 aaPredicted RBP12.48□□□□□ -0.41
LEMD3-202ENST00000539442 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
LEMD3-202ENST00000539442 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
LEMD3-202ENST00000539442 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.48□□□□□ -0.41
LEMD3-202ENST00000539442 SLC12A7Q9Y666 1083 aa12.48□□□□□ -0.41
LEMD3-202ENST00000539442 IGKV6D-41A0A0C4DH26 115 aa12.47□□□□□ -0.41
LEMD3-202ENST00000539442 GOLGA8BA8MQT2 603 aa12.47□□□□□ -0.41
LEMD3-202ENST00000539442 CALM1P0DP23 149 aa12.47□□□□□ -0.41
LEMD3-202ENST00000539442 CALM2P0DP24 149 aa12.47□□□□□ -0.41
LEMD3-202ENST00000539442 CALM3P0DP25 149 aa12.47□□□□□ -0.41
LEMD3-202ENST00000539442 AKR1B1P15121 316 aa12.47□□□□□ -0.41
LEMD3-202ENST00000539442 PPP2R5BQ15173 497 aa12.47□□□□□ -0.41
LEMD3-202ENST00000539442 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
LEMD3-202ENST00000539442 TMEM179Q6ZVK1 233 aa12.47□□□□□ -0.41
LEMD3-202ENST00000539442 IL17RBQ9NRM6 502 aa12.47□□□□□ -0.41
LEMD3-202ENST00000539442 FAM196BA6NMK8 535 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 POTECB2RU33 542 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 ZBTB43O43298 467 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
LEMD3-202ENST00000539442 NMT2O60551 498 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 DDAH1O94760 285 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 METAP2P50579 478 aaKnown RBP eCLIP12.46□□□□□ -0.41
LEMD3-202ENST00000539442 EMP3P54852 163 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 SCRN1Q12765 414 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 RCSD1Q6JBY9 416 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 CATIPQ7Z7H3 387 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 CCDC83Q8IWF9 413 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 SULF1Q8IWU6 871 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 ZNF654Q8IZM8 581 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 LLPHQ9BRT6 129 aaKnown RBP12.46□□□□□ -0.41
LEMD3-202ENST00000539442 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.46□□□□□ -0.41
LEMD3-202ENST00000539442 KAT14Q9H8E8 782 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 SENP2Q9HC62 589 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.41
LEMD3-202ENST00000539442 CABP5Q9NP86 173 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 GINM1Q9NU53 330 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 MTMR4Q9NYA4 1195 aa12.46□□□□□ -0.41
LEMD3-202ENST00000539442 NAP1L2Q9ULW6 460 aaPredicted RBP12.46□□□□□ -0.41
LEMD3-202ENST00000539442 GREB1LQ9C091 1923 aaPredicted RBP12.45□□□□□ -0.42
LEMD3-202ENST00000539442 MPHOSPH10O00566 681 aaKnown RBP12.45□□□□□ -0.42
LEMD3-202ENST00000539442 TTLL1O95922 423 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 TOP1P11387 765 aaKnown RBP12.45□□□□□ -0.42
LEMD3-202ENST00000539442 ST3GAL1Q11201 340 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 STK3Q13188 491 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 ABCB5Q2M3G0 1257 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 SUPT20HL1Q3ZLR7 823 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 CEP95Q96GE4 821 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 MAP3K14Q99558 947 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 KANSL2Q9H9L4 492 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 SYNPO2Q9UMS6 1093 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 STX8Q9UNK0 236 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 HPS5Q9UPZ3 1129 aa12.45□□□□□ -0.42
LEMD3-202ENST00000539442 CCDC196A0A1B0GTZ2 297 aa12.44□□□□□ -0.42
LEMD3-202ENST00000539442 GOLGA8AA7E2F4 631 aa12.44□□□□□ -0.42
LEMD3-202ENST00000539442 SLURP2P0DP57 97 aa12.44□□□□□ -0.42
LEMD3-202ENST00000539442 VEGFAP15692 232 aaPredicted RBP12.44□□□□□ -0.42
LEMD3-202ENST00000539442 NBPF12Q5TAG4 269 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms