RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 FAM89AQ96GI7 184 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 JPH2Q9BR39 696 aaPredicted RBP13.51□□□□□ -0.25
NEK6-212ENST00000539416 FAM107BQ9H098 131 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 ACBD3Q9H3P7 528 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 RAI14Q9P0K7 980 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 COL24A1Q17RW2 1714 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 KIF5CO60282 957 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 YEATS4O95619 227 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 CSF1RP07333 972 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 BMP6P22004 513 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 CMA1P23946 247 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 SATB1Q01826 763 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
NEK6-212ENST00000539416 CHST3Q7LGC8 479 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 GDAP1L1Q96MZ0 367 aa13.51□□□□□ -0.25
NEK6-212ENST00000539416 CDC5LQ99459 802 aaKnown RBP13.51□□□□□ -0.25
NEK6-212ENST00000539416 A0A0G2JLW4 131 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 CTAGE15A4D2H0 777 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 NTSR2O95665 410 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 CTAGE8P0CG41 777 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 BAG6P46379 1132 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 RFX5P48382 616 aaPredicted RBP13.5□□□□□ -0.25
NEK6-212ENST00000539416 IRAK1P51617 712 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 ZNF827Q17R98 1081 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 CTAGE6Q86UF2 777 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 CTAGE4Q8IX94 777 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 POLR3EQ9NVU0 708 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 HPCAL4Q9UM19 191 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 EBAG9O00559 213 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 SHOX2O60902 331 aaPredicted RBP13.5□□□□□ -0.25
NEK6-212ENST00000539416 SYKP43405 635 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
NEK6-212ENST00000539416 EZH2Q15910 746 aaKnown RBP13.5□□□□□ -0.25
NEK6-212ENST00000539416 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 LMBR1LQ6UX01 489 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 DHX32Q7L7V1 743 aaKnown RBP13.5□□□□□ -0.25
NEK6-212ENST00000539416 CNPY4Q8N129 248 aa13.5□□□□□ -0.25
NEK6-212ENST00000539416 LAMB2P55268 1798 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 SH3TC1Q8TE82 1336 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 CTAGE9A4FU28 777 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 KIF28PB7ZC32 967 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 IRS4O14654 1257 aaPredicted RBP13.49□□□□□ -0.25
NEK6-212ENST00000539416 PDE8AO60658 829 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 PDIA3P30101 505 aaKnown RBP13.49□□□□□ -0.25
NEK6-212ENST00000539416 NCAPH2Q6IBW4 605 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 OLFM4Q6UX06 510 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 MYO1FO00160 1098 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 INPP5BP32019 993 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 GGCXP38435 758 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 COPRSQ9NQ92 184 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 U3KPZ7 1027 aaPredicted RBP13.49□□□□□ -0.25
NEK6-212ENST00000539416 QSER1Q2KHR3 1735 aa13.49□□□□□ -0.25
NEK6-212ENST00000539416 FOXN1O15353 648 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 USP8P40818 1118 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 AKAP17AQ02040 695 aaKnown RBP13.48□□□□□ -0.25
NEK6-212ENST00000539416 FMR1Q06787 632 aaKnown RBP eCLIP13.48□□□□□ -0.25
NEK6-212ENST00000539416 SLC10A5Q5PT55 438 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 ANO1Q5XXA6 986 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 TRMT44Q8IYL2 757 aaKnown RBP13.48□□□□□ -0.25
NEK6-212ENST00000539416 SYNE4Q8N205 404 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 CPLX3Q8WVH0 158 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 SETDB2Q96T68 719 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 NYXQ9GZU5 481 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 VIPAS39Q9H9C1 493 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 SAMM50Q9Y512 469 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 LAMA4Q16363 1823 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 GYS1P13807 737 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 EXOSC10Q01780 885 aaKnown RBP13.48□□□□□ -0.25
NEK6-212ENST00000539416 WDR93Q6P2C0 686 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 METTL16Q86W50 562 aaKnown RBP13.48□□□□□ -0.25
NEK6-212ENST00000539416 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
NEK6-212ENST00000539416 KLHDC4Q8TBB5 520 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 GPHNQ9NQX3 736 aaPredicted RBP13.48□□□□□ -0.25
NEK6-212ENST00000539416 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 PCDHA5Q9Y5H7 936 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 CAPN7Q9Y6W3 813 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 ZNF609O15014 1411 aa13.48□□□□□ -0.25
NEK6-212ENST00000539416 DDX60Q8IY21 1712 aaKnown RBP13.48□□□□□ -0.25
NEK6-212ENST00000539416 AGPSO00116 658 aa13.47□□□□□ -0.25
NEK6-212ENST00000539416 G3BP1Q13283 466 aaKnown RBP eCLIP13.47□□□□□ -0.25
NEK6-212ENST00000539416 SHC4Q6S5L8 630 aa13.47□□□□□ -0.25
NEK6-212ENST00000539416 GBP6Q6ZN66 633 aa13.47□□□□□ -0.25
NEK6-212ENST00000539416 CTCFLQ8NI51 663 aaPredicted RBP13.47□□□□□ -0.25
NEK6-212ENST00000539416 BCAS4Q8TDM0 211 aa13.47□□□□□ -0.25
NEK6-212ENST00000539416 CD248Q9HCU0 757 aa13.47□□□□□ -0.25
NEK6-212ENST00000539416 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
NEK6-212ENST00000539416 MYH3P11055 1940 aa13.47□□□□□ -0.25
NEK6-212ENST00000539416 AKR1B15C9JRZ8 316 aaPredicted RBP13.47□□□□□ -0.25
NEK6-212ENST00000539416 TEX33O43247 280 aa13.47□□□□□ -0.25
NEK6-212ENST00000539416 PTPN12Q05209 780 aaKnown RBP13.47□□□□□ -0.25
NEK6-212ENST00000539416 TTC19Q6DKK2 380 aaPredicted RBP13.47□□□□□ -0.25
NEK6-212ENST00000539416 GSPT2Q8IYD1 628 aaKnown RBP13.47□□□□□ -0.25
NEK6-212ENST00000539416 ACRBPQ8NEB7 543 aa13.47□□□□□ -0.25
NEK6-212ENST00000539416 GNL3LQ9NVN8 582 aaKnown RBP13.47□□□□□ -0.25
NEK6-212ENST00000539416 ZMYND10O75800 440 aa13.46□□□□□ -0.25
NEK6-212ENST00000539416 ZNF18P17022 549 aa13.46□□□□□ -0.25
NEK6-212ENST00000539416 TM4SF1P30408 202 aa13.46□□□□□ -0.25
NEK6-212ENST00000539416 FNTAP49354 379 aa13.46□□□□□ -0.25
NEK6-212ENST00000539416 CTSWP56202 376 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms