RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 STK11IPQ8N1F8 1099 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 ENAHQ8N8S7 591 aaPredicted RBP10.29□□□□□ -0.76
DDB1-213ENST00000539332 OSBPL5Q9H0X9 879 aaPredicted RBP10.29□□□□□ -0.76
DDB1-213ENST00000539332 TMOD2Q9NZR1 351 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 ZNF70Q9UC06 446 aaPredicted RBP10.29□□□□□ -0.76
DDB1-213ENST00000539332 DDX49Q9Y6V7 483 aaKnown RBP10.29□□□□□ -0.76
DDB1-213ENST00000539332 TNKSO95271 1327 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 STK36Q9NRP7 1315 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 DYNC1I1O14576 645 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 MYO1BO43795 1136 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 DTNBO60941 627 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 ENTPD3O75355 529 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 METAP2P50579 478 aaKnown RBP eCLIP10.29□□□□□ -0.761e-7■■□□□ 12.6
DDB1-213ENST00000539332 PDE4BQ07343 736 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 TBC1D10BQ4KMP7 808 aaPredicted RBP10.29□□□□□ -0.76
DDB1-213ENST00000539332 FKBP1CQ5VVH2 108 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 ZFPM1Q8IX07 1006 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 UBAC1Q9BSL1 405 aa10.29□□□□□ -0.76
DDB1-213ENST00000539332 PLIN4Q96Q06 1357 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 VPS37CA5D8V6 355 aaPredicted RBP10.28□□□□□ -0.76
DDB1-213ENST00000539332 CDC27P30260 824 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 EPS15P42566 896 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 RESTQ13127 1097 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 PPP2R5BQ15173 497 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 KIF4BQ2VIQ3 1234 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 DPY19L2Q6NUT2 758 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 C16orf86Q6ZW13 317 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 TTC6Q86TZ1 520 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 IQCA1Q86XH1 822 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 ZNF654Q8IZM8 581 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 ANKS1AQ92625 1134 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 DYNLL2Q96FJ2 89 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 CHAMP1Q96JM3 812 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 PDLIM2Q96JY6 352 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 ZSCAN10Q96SZ4 725 aaPredicted RBP10.28□□□□□ -0.76
DDB1-213ENST00000539332 TOMM22Q9NS69 142 aa10.28□□□□□ -0.76
DDB1-213ENST00000539332 COL2A1P02458 1487 aaPredicted RBP10.28□□□□□ -0.76
DDB1-213ENST00000539332 SCN4AP35499 1836 aa10.27□□□□□ -0.76
DDB1-213ENST00000539332 ERICH2A1L162 156 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 CCDC69A6NI79 296 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 GOLGA8AA7E2F4 631 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 TCP10L2B9ZVM9 353 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 RANBP6O60518 1105 aaKnown RBP10.27□□□□□ -0.77
DDB1-213ENST00000539332 PRDM1O75626 825 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 CDKL5O76039 1030 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 SH3BP5LQ7L8J4 393 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 MICU3Q86XE3 530 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 SMAP1Q8IYB5 467 aaPredicted RBP10.27□□□□□ -0.77
DDB1-213ENST00000539332 FAM184AQ8NB25 1140 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 DDX11Q96FC9 970 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 ZKSCAN3Q9BRR0 538 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 DHX36Q9H2U1 1008 aaKnown RBP10.27□□□□□ -0.77
DDB1-213ENST00000539332 VEZTQ9HBM0 779 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 TCP11L1Q9NUJ3 509 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 BCCIPQ9P287 314 aaKnown RBP eCLIP10.27□□□□□ -0.77
DDB1-213ENST00000539332 CCDC39Q9UFE4 941 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 NAP1L2Q9ULW6 460 aaPredicted RBP10.27□□□□□ -0.77
DDB1-213ENST00000539332 SLC12A7Q9Y666 1083 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 CNTNAP1P78357 1384 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 ATRNL1Q5VV63 1379 aa10.27□□□□□ -0.77
DDB1-213ENST00000539332 BAZ2BQ9UIF8 2168 aaKnown RBP10.27□□□□□ -0.77
DDB1-213ENST00000539332 DDTLA6NHG4 134 aaPredicted RBP10.26□□□□□ -0.77
DDB1-213ENST00000539332 IFNAR1P17181 557 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 RASA1P20936 1047 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 LMOD1P29536 600 aaPredicted RBP10.26□□□□□ -0.77
DDB1-213ENST00000539332 ADD1P35611 737 aaKnown RBP10.26□□□□□ -0.77
DDB1-213ENST00000539332 GABPAQ06546 454 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 RCSD1Q6JBY9 416 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 NFXL1Q6ZNB6 911 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 FAM83AQ86UY5 434 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 ZSCAN29Q8IWY8 852 aaPredicted RBP10.26□□□□□ -0.77
DDB1-213ENST00000539332 SLC44A5Q8NCS7 719 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 TRPM4Q8TD43 1214 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
DDB1-213ENST00000539332 ZSCAN16Q9H4T2 348 aaPredicted RBP10.26□□□□□ -0.77
DDB1-213ENST00000539332 ORC3Q9UBD5 711 aaPredicted RBP10.26□□□□□ -0.77
DDB1-213ENST00000539332 SERPINB13Q9UIV8 391 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 ASTN2O75129 1339 aaPredicted RBP10.26□□□□□ -0.77
DDB1-213ENST00000539332 GLTPD2A6NH11 291 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 CPLX1O14810 134 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 DDAH1O94760 285 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 ELP1O95163 1332 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 HLA-DOAP06340 250 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 NOVP48745 357 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 CDK8P49336 464 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 TROAPQ12815 778 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 CCDC178Q5BJE1 867 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 CPLX2Q6PUV4 134 aaKnown RBP10.26□□□□□ -0.77
DDB1-213ENST00000539332 SYNE3Q6ZMZ3 975 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 RAB11FIP4Q86YS3 637 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 FAM151AQ8WW52 585 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 MYL10Q9BUA6 226 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 EHD4Q9H223 541 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 ZNF287Q9HBT7 754 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 PI4KBQ9UBF8 816 aa10.26□□□□□ -0.77
DDB1-213ENST00000539332 CCDC196A0A1B0GTZ2 297 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 FMNL1O95466 1100 aaPredicted RBP10.25□□□□□ -0.77
DDB1-213ENST00000539332 CALM1P0DP23 149 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 CALM2P0DP24 149 aa10.25□□□□□ -0.77
DDB1-213ENST00000539332 CALM3P0DP25 149 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms