RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 GH2P01242 217 aa17.3■□□□□ 0.36
PBX3-212ENST00000538998 G3BP1Q13283 466 aaKnown RBP eCLIP17.3■□□□□ 0.36
PBX3-212ENST00000538998 GRB14Q14449 540 aa17.3■□□□□ 0.36
PBX3-212ENST00000538998 LBX2Q6XYB7 198 aa17.3■□□□□ 0.36
PBX3-212ENST00000538998 ADGRA1Q86SQ6 560 aa17.3■□□□□ 0.36
PBX3-212ENST00000538998 CDX2Q99626 313 aaPredicted RBP17.3■□□□□ 0.36
PBX3-212ENST00000538998 NDUFB9Q9Y6M9 179 aa17.3■□□□□ 0.36
PBX3-212ENST00000538998 ZYXQ15942 572 aaKnown RBP17.29■□□□□ 0.36
PBX3-212ENST00000538998 TTC39AQ5SRH9 613 aa17.29■□□□□ 0.36
PBX3-212ENST00000538998 CATSPERGQ6ZRH7 1159 aa17.29■□□□□ 0.36
PBX3-212ENST00000538998 ARRDC4Q8NCT1 418 aa17.29■□□□□ 0.36
PBX3-212ENST00000538998 MAFAQ8NHW3 353 aaPredicted RBP17.29■□□□□ 0.36
PBX3-212ENST00000538998 CDCA7LQ96GN5 454 aa17.29■□□□□ 0.36
PBX3-212ENST00000538998 SNRKQ9NRH2 765 aa17.29■□□□□ 0.36
PBX3-212ENST00000538998 SAP30BPQ9UHR5 308 aaKnown RBP17.29■□□□□ 0.36
PBX3-212ENST00000538998 ATP11BQ9Y2G3 1177 aa17.29■□□□□ 0.36
PBX3-212ENST00000538998 CYBAP13498 195 aa17.28■□□□□ 0.36
PBX3-212ENST00000538998 VCAM1P19320 739 aa17.28■□□□□ 0.36
PBX3-212ENST00000538998 CCDC158Q5M9N0 1113 aa17.28■□□□□ 0.36
PBX3-212ENST00000538998 TATDN1Q6P1N9 297 aa17.28■□□□□ 0.36
PBX3-212ENST00000538998 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
PBX3-212ENST00000538998 TRMT2AQ8IZ69 625 aaKnown RBP17.28■□□□□ 0.36
PBX3-212ENST00000538998 ARHGAP45Q92619 1136 aa17.28■□□□□ 0.36
PBX3-212ENST00000538998 KIAA1683Q9H0B3 1180 aa17.28■□□□□ 0.36
PBX3-212ENST00000538998 SEMA6BQ9H3T3 888 aa17.28■□□□□ 0.36
PBX3-212ENST00000538998 FOCADQ5VW36 1801 aa17.28■□□□□ 0.36
PBX3-212ENST00000538998 LTBP2Q14767 1821 aa17.27■□□□□ 0.36
PBX3-212ENST00000538998 KBTBD13C9JR72 458 aa17.27■□□□□ 0.36
PBX3-212ENST00000538998 CYP2E1P05181 493 aaPredicted RBP17.27■□□□□ 0.36
PBX3-212ENST00000538998 CYP2C19P33261 490 aa17.27■□□□□ 0.36
PBX3-212ENST00000538998 SMAD3P84022 425 aaKnown RBP17.27■□□□□ 0.36
PBX3-212ENST00000538998 SHHQ15465 462 aa17.27■□□□□ 0.36
PBX3-212ENST00000538998 NPLOC4Q8TAT6 608 aa17.27■□□□□ 0.36
PBX3-212ENST00000538998 GPR108Q9NPR9 543 aa17.27■□□□□ 0.36
PBX3-212ENST00000538998 IGHA2P01877 340 aa17.26■□□□□ 0.35
PBX3-212ENST00000538998 GNAI2P04899 355 aa17.26■□□□□ 0.35
PBX3-212ENST00000538998 RAB3GAP1Q15042 981 aa17.26■□□□□ 0.35
PBX3-212ENST00000538998 GJC2Q5T442 439 aaPredicted RBP17.26■□□□□ 0.35
PBX3-212ENST00000538998 OLFML2BQ68BL8 750 aa17.26■□□□□ 0.35
PBX3-212ENST00000538998 SLC39A5Q6ZMH5 540 aa17.26■□□□□ 0.35
PBX3-212ENST00000538998 TRPV1Q8NER1 839 aa17.26■□□□□ 0.35
PBX3-212ENST00000538998 EHD4Q9H223 541 aa17.26■□□□□ 0.35
PBX3-212ENST00000538998 PRDM5Q9NQX1 630 aaPredicted RBP17.26■□□□□ 0.35
PBX3-212ENST00000538998 BTBD7Q9P203 1132 aa17.26■□□□□ 0.35
PBX3-212ENST00000538998 SERPINB13Q9UIV8 391 aa17.26■□□□□ 0.35
PBX3-212ENST00000538998 CDK5RAP2Q96SN8 1893 aa17.25■□□□□ 0.35
PBX3-212ENST00000538998 PNMA6EA0A0J9YXQ4 647 aa17.25■□□□□ 0.35
PBX3-212ENST00000538998 SPDYE16A6NNV3 312 aaPredicted RBP17.25■□□□□ 0.35
PBX3-212ENST00000538998 SNX17Q15036 470 aa17.25■□□□□ 0.35
PBX3-212ENST00000538998 C9orf50Q5SZB4 431 aa17.25■□□□□ 0.35
PBX3-212ENST00000538998 DPP9Q86TI2 863 aa17.25■□□□□ 0.35
PBX3-212ENST00000538998 ZNF512BQ96KM6 892 aaPredicted RBP17.25■□□□□ 0.35
PBX3-212ENST00000538998 PRDM6Q9NQX0 595 aa17.25■□□□□ 0.35
PBX3-212ENST00000538998 DNAH12Q6ZR08 3092 aa17.25■□□□□ 0.35
PBX3-212ENST00000538998 LAMA2P24043 3122 aaKnown RBP17.25■□□□□ 0.35
PBX3-212ENST00000538998 STRNO43815 780 aa17.24■□□□□ 0.35
PBX3-212ENST00000538998 USP5P45974 858 aa17.24■□□□□ 0.35
PBX3-212ENST00000538998 DYNLL1P63167 89 aaKnown RBP17.24■□□□□ 0.35
PBX3-212ENST00000538998 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
PBX3-212ENST00000538998 CERKLQ49MI3 558 aaPredicted RBP17.24■□□□□ 0.35
PBX3-212ENST00000538998 TNNI3KQ59H18 835 aa17.24■□□□□ 0.35
PBX3-212ENST00000538998 MYLIPQ8WY64 445 aa17.24■□□□□ 0.35
PBX3-212ENST00000538998 BADQ92934 168 aa17.24■□□□□ 0.35
PBX3-212ENST00000538998 DBNDD2Q9BQY9 259 aa17.24■□□□□ 0.35
PBX3-212ENST00000538998 RPAP3Q9H6T3 665 aaPredicted RBP17.24■□□□□ 0.35
PBX3-212ENST00000538998 CABP5Q9NP86 173 aa17.24■□□□□ 0.35
PBX3-212ENST00000538998 FPGT-TNNI3KV9GXZ4 949 aa17.24■□□□□ 0.35
PBX3-212ENST00000538998 TMEM265A0A087WTH1 108 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 SEPT4O43236 478 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 FOSL2P15408 326 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 CYP7A1P22680 504 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 ADORA2AP29274 412 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 ZAP70P43403 619 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 RARSP54136 660 aaKnown RBP17.23■□□□□ 0.35
PBX3-212ENST00000538998 TRIM60Q495X7 471 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 C1orf53Q5VUE5 145 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 TTC6Q86TZ1 520 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 ACER1Q8TDN7 264 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 SYMPKQ92797 1274 aaKnown RBP17.23■□□□□ 0.35
PBX3-212ENST00000538998 TTYH1Q9H313 450 aaPredicted RBP17.23■□□□□ 0.35
PBX3-212ENST00000538998 PIH1D3Q9NQM4 214 aaKnown RBP17.23■□□□□ 0.35
PBX3-212ENST00000538998 PDLIM7Q9NR12 457 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 SLC5A4Q9NY91 659 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 ZNF236Q9UL36 1845 aa17.23■□□□□ 0.35
PBX3-212ENST00000538998 SPTBN5Q9NRC6 3674 aaKnown RBP17.23■□□□□ 0.35
PBX3-212ENST00000538998 MOV10L1Q9BXT6 1211 aaKnown RBP17.22■□□□□ 0.35
PBX3-212ENST00000538998 VCANP13611 3396 aa17.22■□□□□ 0.35
PBX3-212ENST00000538998 OS9Q13438 667 aaPredicted RBP17.21■□□□□ 0.35
PBX3-212ENST00000538998 COG2Q14746 738 aa17.21■□□□□ 0.35
PBX3-212ENST00000538998 TMED8Q6PL24 325 aaPredicted RBP17.21■□□□□ 0.35
PBX3-212ENST00000538998 MIGA1Q8NAN2 632 aa17.21■□□□□ 0.35
PBX3-212ENST00000538998 SHCBP1Q8NEM2 672 aa17.21■□□□□ 0.35
PBX3-212ENST00000538998 HOXC10Q9NYD6 342 aa17.21■□□□□ 0.35
PBX3-212ENST00000538998 RLFQ13129 1914 aa17.21■□□□□ 0.35
PBX3-212ENST00000538998 TRIM43BA6NCK2 446 aa17.2■□□□□ 0.34
PBX3-212ENST00000538998 ZNF316A6NFI3 1004 aaPredicted RBP17.2■□□□□ 0.34
PBX3-212ENST00000538998 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
PBX3-212ENST00000538998 IDH1O75874 414 aaKnown RBP17.2■□□□□ 0.34
PBX3-212ENST00000538998 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
PBX3-212ENST00000538998 ADCYAP1R1P41586 468 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms