RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 C10orf71Q711Q0 1435 aa23.58■■□□□ 1.36
DDX55-205ENST00000538744 FKBP1AP62942 108 aaKnown RBP23.57■■□□□ 1.36
DDX55-205ENST00000538744 FAM160A1Q05DH4 1040 aa23.57■■□□□ 1.36
DDX55-205ENST00000538744 SLC39A14Q15043 492 aa23.57■■□□□ 1.36
DDX55-205ENST00000538744 PKN1Q16512 942 aa23.57■■□□□ 1.36
DDX55-205ENST00000538744 TEKT1Q969V4 418 aa23.57■■□□□ 1.36
DDX55-205ENST00000538744 BTBD18B2RXH4 712 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 UVSSAQ2YD98 709 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 PNMA1Q8ND90 353 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 C7orf43Q8WVR3 580 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 V9GY48 417 aaPredicted RBP23.56■■□□□ 1.36
DDX55-205ENST00000538744 SCN9AQ15858 1988 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 MYH8P13535 1937 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 USP17L3A6NCW0 530 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 USP17L4A6NCW7 530 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 ECE2O60344 883 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 SCNN1DP51172 638 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 STRIP1Q5VSL9 837 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 USP17L1Q7RTZ2 530 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 JMYQ8N9B5 988 aa23.56■■□□□ 1.36
DDX55-205ENST00000538744 CTAGE5O15320 804 aa23.55■■□□□ 1.36
DDX55-205ENST00000538744 KINO60870 393 aaKnown RBP23.55■■□□□ 1.36
DDX55-205ENST00000538744 SRBD1Q8N5C6 995 aaKnown RBP23.55■■□□□ 1.36
DDX55-205ENST00000538744 SUPT20HQ8NEM7 779 aa23.55■■□□□ 1.36
DDX55-205ENST00000538744 ENGASEQ8NFI3 743 aa23.55■■□□□ 1.36
DDX55-205ENST00000538744 USP40Q9NVE5 1235 aa23.55■■□□□ 1.36
DDX55-205ENST00000538744 PPP6R2O75170 966 aa23.54■■□□□ 1.36
DDX55-205ENST00000538744 PICALMQ13492 652 aa23.54■■□□□ 1.36
DDX55-205ENST00000538744 SNW1Q13573 536 aaKnown RBP23.54■■□□□ 1.36
DDX55-205ENST00000538744 DEFB132Q7Z7B7 95 aa23.54■■□□□ 1.36
DDX55-205ENST00000538744 CKAP2LQ8IYA6 745 aa23.54■■□□□ 1.36
DDX55-205ENST00000538744 NEDD1Q8NHV4 660 aa23.54■■□□□ 1.36
DDX55-205ENST00000538744 WDHD1O75717 1129 aaPredicted RBP23.53■■□□□ 1.36
DDX55-205ENST00000538744 GRM4Q14833 912 aa23.53■■□□□ 1.36
DDX55-205ENST00000538744 PTPAQ15257 358 aa23.53■■□□□ 1.36
DDX55-205ENST00000538744 PHF20Q9BVI0 1012 aa23.53■■□□□ 1.36
DDX55-205ENST00000538744 VPS54Q9P1Q0 977 aa23.53■■□□□ 1.36
DDX55-205ENST00000538744 GNAQP50148 359 aa23.53■■□□□ 1.36
DDX55-205ENST00000538744 TYRO3Q06418 890 aa23.53■■□□□ 1.36
DDX55-205ENST00000538744 MRIQ9BWK5 157 aa23.53■■□□□ 1.36
DDX55-205ENST00000538744 PDGFDQ9GZP0 370 aaPredicted RBP23.53■■□□□ 1.36
DDX55-205ENST00000538744 KCNQ5Q9NR82 932 aa23.53■■□□□ 1.36
DDX55-205ENST00000538744 CRKP46108 304 aa23.52■■□□□ 1.36
DDX55-205ENST00000538744 KIAA2012Q0VF49 1180 aa23.52■■□□□ 1.36
DDX55-205ENST00000538744 RILPL1Q5EBL4 403 aa23.52■■□□□ 1.36
DDX55-205ENST00000538744 DACT2Q5SW24 774 aa23.52■■□□□ 1.36
DDX55-205ENST00000538744 AXDND1Q5T1B0 1012 aaPredicted RBP23.52■■□□□ 1.36
DDX55-205ENST00000538744 SLC16A10Q8TF71 515 aa23.52■■□□□ 1.36
DDX55-205ENST00000538744 STX8Q9UNK0 236 aa23.52■■□□□ 1.36
DDX55-205ENST00000538744 hCG_1642624A0A1W2PR95 340 aa23.51■■□□□ 1.35
DDX55-205ENST00000538744 KRT2P35908 639 aa23.51■■□□□ 1.35
DDX55-205ENST00000538744 HDLBPQ00341 1268 aaKnown RBP23.51■■□□□ 1.35
DDX55-205ENST00000538744 GRIPAP1Q4V328 841 aa23.51■■□□□ 1.35
DDX55-205ENST00000538744 APOBEC3HQ6NTF7 200 aaKnown RBP23.51■■□□□ 1.35
DDX55-205ENST00000538744 CDC42EP5Q6NZY7 148 aa23.51■■□□□ 1.35
DDX55-205ENST00000538744 FMR1NBQ8N0W7 255 aaPredicted RBP23.51■■□□□ 1.35
DDX55-205ENST00000538744 TRIM44Q96DX7 344 aaPredicted RBP23.51■■□□□ 1.35
DDX55-205ENST00000538744 PDLIM2Q96JY6 352 aa23.51■■□□□ 1.35
DDX55-205ENST00000538744 ZDHHC15Q96MV8 337 aa23.51■■□□□ 1.35
DDX55-205ENST00000538744 TMEM47Q9BQJ4 181 aa23.51■■□□□ 1.35
DDX55-205ENST00000538744 BRMS1Q9HCU9 246 aa23.51■■□□□ 1.35
DDX55-205ENST00000538744 DDX4Q9NQI0 724 aaKnown RBP23.51■■□□□ 1.35
DDX55-205ENST00000538744 SCG2P13521 617 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 CMA1P23946 247 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 NR5A1Q13285 461 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 AOC3Q16853 763 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 SASS6Q6UVJ0 657 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 SHISA4Q96DD7 197 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.5■■□□□ 1.35
DDX55-205ENST00000538744 PLIN4Q96Q06 1357 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 A0A1B0GVL5 298 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 MARCKSP29966 332 aaPredicted RBP23.5■■□□□ 1.35
DDX55-205ENST00000538744 GABPAQ06546 454 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 OXER1Q8TDS5 423 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 MRVI1Q9Y6F6 885 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 PSME4Q14997 1843 aa23.5■■□□□ 1.35
DDX55-205ENST00000538744 TOB1P50616 345 aaPredicted RBP23.49■■□□□ 1.35
DDX55-205ENST00000538744 NDUFA8P51970 172 aa23.49■■□□□ 1.35
DDX55-205ENST00000538744 PFKFB3Q16875 520 aaPredicted RBP23.49■■□□□ 1.35
DDX55-205ENST00000538744 KIAA0825Q8IV33 1275 aa23.49■■□□□ 1.35
DDX55-205ENST00000538744 TTLL6Q8N841 843 aa23.49■■□□□ 1.35
DDX55-205ENST00000538744 OSBPL5Q9H0X9 879 aaPredicted RBP23.49■■□□□ 1.35
DDX55-205ENST00000538744 MAD2L2Q9UI95 211 aa23.49■■□□□ 1.35
DDX55-205ENST00000538744 C21orf2O43822 256 aa23.48■■□□□ 1.35
DDX55-205ENST00000538744 SWAP70Q9UH65 585 aa23.48■■□□□ 1.35
DDX55-205ENST00000538744 KIF13BQ9NQT8 1826 aa23.48■■□□□ 1.35
DDX55-205ENST00000538744 MYO3BQ8WXR4 1341 aa23.48■■□□□ 1.35
DDX55-205ENST00000538744 CUTAO60888 179 aa23.47■■□□□ 1.35
DDX55-205ENST00000538744 TOP1P11387 765 aaKnown RBP23.47■■□□□ 1.35
DDX55-205ENST00000538744 FAM200AQ8TCP9 573 aa23.47■■□□□ 1.35
DDX55-205ENST00000538744 LZTS2Q9BRK4 669 aa23.47■■□□□ 1.35
DDX55-205ENST00000538744 PPIP5K2O43314 1243 aa23.47■■□□□ 1.35
DDX55-205ENST00000538744 HLA-DOAP06340 250 aa23.47■■□□□ 1.35
DDX55-205ENST00000538744 CCDC93Q567U6 631 aa23.47■■□□□ 1.35
DDX55-205ENST00000538744 STAG2Q8N3U4 1231 aa23.47■■□□□ 1.35
DDX55-205ENST00000538744 SERPINB13Q9UIV8 391 aa23.47■■□□□ 1.35
DDX55-205ENST00000538744 CEP131Q9UPN4 1083 aa23.47■■□□□ 1.35
DDX55-205ENST00000538744 PALM3A6NDB9 673 aaPredicted RBP23.46■■□□□ 1.35
DDX55-205ENST00000538744 PFKFB1P16118 471 aa23.46■■□□□ 1.35
DDX55-205ENST00000538744 NOVP48745 357 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms