RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 GINM1Q9NU53 330 aa20.27■□□□□ 0.84
CLN6-202ENST00000538696 PDRG1Q9NUG6 133 aa20.27■□□□□ 0.84
CLN6-202ENST00000538696 ZSWIM5Q9P217 1185 aa20.27■□□□□ 0.84
CLN6-202ENST00000538696 TLL2Q9Y6L7 1015 aa20.27■□□□□ 0.84
CLN6-202ENST00000538696 UNCXA6NJT0 531 aa20.27■□□□□ 0.83
CLN6-202ENST00000538696 ASNSP08243 561 aa20.27■□□□□ 0.83
CLN6-202ENST00000538696 RPS6KB1P23443 525 aa20.27■□□□□ 0.83
CLN6-202ENST00000538696 MCM2P49736 904 aa20.27■□□□□ 0.83
CLN6-202ENST00000538696 AK2P54819 239 aa20.27■□□□□ 0.83
CLN6-202ENST00000538696 HUNKP57058 714 aa20.27■□□□□ 0.83
CLN6-202ENST00000538696 IL27Q8NEV9 243 aa20.27■□□□□ 0.83
CLN6-202ENST00000538696 NMT2O60551 498 aa20.26■□□□□ 0.83
CLN6-202ENST00000538696 PTPRAP18433 802 aa20.26■□□□□ 0.83
CLN6-202ENST00000538696 APLP1P51693 650 aa20.26■□□□□ 0.83
CLN6-202ENST00000538696 RAB3GAP1Q15042 981 aa20.26■□□□□ 0.83
CLN6-202ENST00000538696 SAPCD2Q86UD0 394 aa20.26■□□□□ 0.83
CLN6-202ENST00000538696 ZKSCAN3Q9BRR0 538 aa20.26■□□□□ 0.83
CLN6-202ENST00000538696 SLKQ9H2G2 1235 aaPredicted RBP20.26■□□□□ 0.83
CLN6-202ENST00000538696 PICK1Q9NRD5 415 aa20.26■□□□□ 0.83
CLN6-202ENST00000538696 IL17RBQ9NRM6 502 aa20.26■□□□□ 0.83
CLN6-202ENST00000538696 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.26■□□□□ 0.83
CLN6-202ENST00000538696 CHST3Q7LGC8 479 aa20.25■□□□□ 0.83
CLN6-202ENST00000538696 CNKSR2Q8WXI2 1034 aa20.25■□□□□ 0.83
CLN6-202ENST00000538696 CEP95Q96GE4 821 aa20.25■□□□□ 0.83
CLN6-202ENST00000538696 TCEANC2Q96MN5 208 aa20.25■□□□□ 0.83
CLN6-202ENST00000538696 FOXD4L1Q9NU39 408 aa20.25■□□□□ 0.83
CLN6-202ENST00000538696 TCP11L1Q9NUJ3 509 aa20.25■□□□□ 0.83
CLN6-202ENST00000538696 ABT1Q9ULW3 272 aaKnown RBP20.25■□□□□ 0.83
CLN6-202ENST00000538696 LOC285556D6RIA3 1793 aa20.24■□□□□ 0.83
CLN6-202ENST00000538696 SPDYE5A6NIY4 337 aa20.24■□□□□ 0.83
CLN6-202ENST00000538696 PRC1O43663 620 aa20.24■□□□□ 0.83
CLN6-202ENST00000538696 MCM5P33992 734 aa20.24■□□□□ 0.83
CLN6-202ENST00000538696 ICA1Q05084 483 aa20.24■□□□□ 0.83
CLN6-202ENST00000538696 TMX3Q96JJ7 454 aa20.24■□□□□ 0.83
CLN6-202ENST00000538696 TNKSO95271 1327 aa20.23■□□□□ 0.83
CLN6-202ENST00000538696 USP17L5A8MUK1 530 aa20.23■□□□□ 0.83
CLN6-202ENST00000538696 HMGB1P09429 215 aaKnown RBP20.23■□□□□ 0.83
CLN6-202ENST00000538696 NOVP48745 357 aa20.23■□□□□ 0.83
CLN6-202ENST00000538696 EXOSC10Q01780 885 aaKnown RBP20.23■□□□□ 0.83
CLN6-202ENST00000538696 DHX32Q7L7V1 743 aaKnown RBP20.23■□□□□ 0.83
CLN6-202ENST00000538696 IQCA1Q86XH1 822 aa20.23■□□□□ 0.83
CLN6-202ENST00000538696 ZSCAN10Q96SZ4 725 aaPredicted RBP20.23■□□□□ 0.83
CLN6-202ENST00000538696 LARP6Q9BRS8 491 aaKnown RBP20.23■□□□□ 0.83
CLN6-202ENST00000538696 CREBZFQ9NS37 354 aa20.23■□□□□ 0.83
CLN6-202ENST00000538696 MTMR4Q9NYA4 1195 aa20.23■□□□□ 0.83
CLN6-202ENST00000538696 WDR19Q8NEZ3 1342 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 GJA5P36382 358 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 SEC23AQ15436 765 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 ERO1BQ86YB8 467 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 SIAH1Q8IUQ4 282 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 OPTNQ96CV9 577 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 SLC10A4Q96EP9 437 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 OTUD5Q96G74 571 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 UBAC1Q9BSL1 405 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 LRRC2Q9BYS8 371 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 KANSL2Q9H9L4 492 aa20.22■□□□□ 0.83
CLN6-202ENST00000538696 EEF2P13639 858 aaKnown RBP20.21■□□□□ 0.83
CLN6-202ENST00000538696 PPATQ06203 517 aa20.21■□□□□ 0.83
CLN6-202ENST00000538696 RCSD1Q6JBY9 416 aa20.21■□□□□ 0.83
CLN6-202ENST00000538696 RGMBQ6NW40 437 aa20.21■□□□□ 0.83
CLN6-202ENST00000538696 RASAL3Q86YV0 1011 aa20.21■□□□□ 0.83
CLN6-202ENST00000538696 ENAHQ8N8S7 591 aaPredicted RBP20.21■□□□□ 0.83
CLN6-202ENST00000538696 ACER1Q8TDN7 264 aa20.21■□□□□ 0.83
CLN6-202ENST00000538696 WNK4Q96J92 1243 aa20.21■□□□□ 0.83
CLN6-202ENST00000538696 WDR18Q9BV38 432 aa20.21■□□□□ 0.83
CLN6-202ENST00000538696 ALDH8A1Q9H2A2 487 aaPredicted RBP20.21■□□□□ 0.83
CLN6-202ENST00000538696 AS3MTQ9HBK9 375 aa20.21■□□□□ 0.83
CLN6-202ENST00000538696 GPHNQ9NQX3 736 aaPredicted RBP20.21■□□□□ 0.83
CLN6-202ENST00000538696 NYAP2Q9P242 653 aa20.21■□□□□ 0.83
CLN6-202ENST00000538696 ZHX2Q9Y6X8 837 aa20.21■□□□□ 0.83
CLN6-202ENST00000538696 A0A1W2PRG0 241 aa20.2■□□□□ 0.82
CLN6-202ENST00000538696 SH2B2O14492 632 aaPredicted RBP20.2■□□□□ 0.82
CLN6-202ENST00000538696 IFIT3O14879 490 aaKnown RBP20.2■□□□□ 0.82
CLN6-202ENST00000538696 TTLL1O95922 423 aa20.2■□□□□ 0.82
CLN6-202ENST00000538696 HSP90AA1P07900 732 aaKnown RBP20.2■□□□□ 0.82
CLN6-202ENST00000538696 ECE1P42892 770 aa20.2■□□□□ 0.82
CLN6-202ENST00000538696 PPIL2Q13356 520 aa20.2■□□□□ 0.82
CLN6-202ENST00000538696 CUL4AQ13619 759 aa20.2■□□□□ 0.82
CLN6-202ENST00000538696 TOB2Q14106 344 aaPredicted RBP20.2■□□□□ 0.82
CLN6-202ENST00000538696 HHIPL1Q96JK4 782 aa20.2■□□□□ 0.82
CLN6-202ENST00000538696 TMEM87BQ96K49 555 aa20.2■□□□□ 0.82
CLN6-202ENST00000538696 MTA3Q9BTC8 594 aa20.2■□□□□ 0.82
CLN6-202ENST00000538696 LIMCH1Q9UPQ0 1083 aa20.2■□□□□ 0.82
CLN6-202ENST00000538696 AFG3L2Q9Y4W6 797 aa20.2■□□□□ 0.82
CLN6-202ENST00000538696 LARGE1O95461 756 aa20.19■□□□□ 0.82
CLN6-202ENST00000538696 SLC10A3P09131 477 aa20.19■□□□□ 0.82
CLN6-202ENST00000538696 ZNF157P51786 506 aaPredicted RBP20.19■□□□□ 0.82
CLN6-202ENST00000538696 C1QTNF8P60827 252 aa20.19■□□□□ 0.82
CLN6-202ENST00000538696 ATP2B2Q01814 1243 aa20.19■□□□□ 0.82
CLN6-202ENST00000538696 CCDC178Q5BJE1 867 aa20.19■□□□□ 0.82
CLN6-202ENST00000538696 TMEM67Q5HYA8 995 aa20.19■□□□□ 0.82
CLN6-202ENST00000538696 IGDCC4Q8TDY8 1250 aa20.19■□□□□ 0.82
CLN6-202ENST00000538696 SENP2Q9HC62 589 aa20.19■□□□□ 0.82
CLN6-202ENST00000538696 ARHGEF10LQ9HCE6 1279 aa20.19■□□□□ 0.82
CLN6-202ENST00000538696 STX8Q9UNK0 236 aa20.19■□□□□ 0.82
CLN6-202ENST00000538696 RASSF10A6NK89 507 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 IRF6O14896 467 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 DDIT3P35638 169 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 SPP2Q13103 211 aa20.18■□□□□ 0.82
CLN6-202ENST00000538696 WTAPQ15007 396 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms