RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 MCTP2Q6DN12 878 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 FAM76AQ8TAV0 307 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 PAGR1Q9BTK6 254 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 CLSTN2Q9H4D0 955 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 MLXIPQ9HAP2 919 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 PABPC4Q13310 644 aaKnown RBP eCLIP18.67■□□□□ 0.58
SCARB1-205ENST00000538291 TUBB2AQ13885 445 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 MIER3Q7Z3K6 550 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 NELFCDQ8IXH7 590 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 TUBB2BQ9BVA1 445 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 USTQ9Y2C2 406 aa18.67■□□□□ 0.58
SCARB1-205ENST00000538291 IRX5P78411 483 aaPredicted RBP18.66■□□□□ 0.58
SCARB1-205ENST00000538291 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.66■□□□□ 0.589e-7■■□□□ 11.9
SCARB1-205ENST00000538291 ATP2B4P23634 1241 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 INTS8Q75QN2 995 aaKnown RBP18.66■□□□□ 0.58
SCARB1-205ENST00000538291 HDXQ7Z353 690 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 VPS52Q8N1B4 723 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 DSCC1Q9BVC3 393 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 COL17A1Q9UMD9 1497 aaPredicted RBP18.66■□□□□ 0.58
SCARB1-205ENST00000538291 FLOT1O75955 427 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 HSPA1LP34931 641 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 RAD51AP2Q09MP3 1159 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 TPH2Q8IWU9 490 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 EIF4A1P60842 406 aaKnown RBP18.66■□□□□ 0.58
SCARB1-205ENST00000538291 FANCCQ00597 558 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 PPP2R3AQ06190 1150 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 AFAP1L2Q8N4X5 818 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 SECISBP2LQ93073 1101 aaKnown RBP18.66■□□□□ 0.58
SCARB1-205ENST00000538291 SMCO2A6NFE2 343 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 TNNI1P19237 187 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 FAM47CQ5HY64 1035 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 KCNJ14Q9UNX9 436 aa18.66■□□□□ 0.58
SCARB1-205ENST00000538291 ZNF202O95125 648 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 CCDC84Q86UT8 332 aaPredicted RBP18.65■□□□□ 0.58
SCARB1-205ENST00000538291 GSDMBQ8TAX9 411 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 KDM3AQ9Y4C1 1321 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 ATP5JP18859 108 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 ERCC6LQ2NKX8 1250 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 UIMC1Q96RL1 719 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 MAGEA1P43355 309 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 KLHL30Q0D2K2 578 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 ARHGEF16Q5VV41 709 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 ASIC3Q9UHC3 531 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 NDUFB9Q9Y6M9 179 aa18.65■□□□□ 0.58
SCARB1-205ENST00000538291 PNMA6EA0A0J9YXQ4 647 aa18.64■□□□□ 0.58
SCARB1-205ENST00000538291 PPP2R5DQ14738 602 aa18.64■□□□□ 0.58
SCARB1-205ENST00000538291 POSTNQ15063 836 aa18.64■□□□□ 0.58
SCARB1-205ENST00000538291 KMT5BQ4FZB7 885 aa18.64■□□□□ 0.58
SCARB1-205ENST00000538291 BEND3Q5T5X7 828 aa18.64■□□□□ 0.58
SCARB1-205ENST00000538291 NEURL1BA8MQ27 555 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 NOL3O60936 208 aaKnown RBP18.64■□□□□ 0.57
SCARB1-205ENST00000538291 CLCN1P35523 988 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 FYB2Q5VWT5 728 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 C2CD5Q86YS7 1000 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 PNMA2Q9UL42 364 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 ATP10AO60312 1499 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 TCOF1Q13428 1488 aaKnown RBP18.64■□□□□ 0.57
SCARB1-205ENST00000538291 TESPA1A2RU30 521 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-205ENST00000538291 TAOK1Q7L7X3 1001 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 TMTC1Q8IUR5 882 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 VPS54Q9P1Q0 977 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.64■□□□□ 0.57
SCARB1-205ENST00000538291 USP17L12C9JPN9 530 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 USP17L21D6R901 530 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 NLRP12P59046 1061 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 RNASE9P60153 205 aaKnown RBP18.64■□□□□ 0.57
SCARB1-205ENST00000538291 SYCE1Q8N0S2 351 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 DDX17Q92841 729 aaKnown RBP18.64■□□□□ 0.57
SCARB1-205ENST00000538291 MRRFQ96E11 262 aaKnown RBP18.64■□□□□ 0.57
SCARB1-205ENST00000538291 PPANQ9NQ55 473 aaKnown RBP18.64■□□□□ 0.57
SCARB1-205ENST00000538291 TAB2Q9NYJ8 693 aa18.64■□□□□ 0.57
SCARB1-205ENST00000538291 EVCP57679 992 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 ZBTB8OSQ8IWT0 167 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 TRPC6Q9Y210 931 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 VIMP08670 466 aaKnown RBP18.63■□□□□ 0.57
SCARB1-205ENST00000538291 MRPL11Q9Y3B7 192 aaKnown RBP18.63■□□□□ 0.57
SCARB1-205ENST00000538291 NR1I2O75469 434 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 METTL13Q8N6R0 699 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 NELFBQ8WX92 580 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 CNKSR1Q969H4 720 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 E7EWF7 191 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 CIB2O75838 187 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 ALAS1P13196 640 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 LGSNQ5TDP6 509 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 NUCKS1Q9H1E3 243 aaKnown RBP18.63■□□□□ 0.57
SCARB1-205ENST00000538291 NFE2L3Q9Y4A8 694 aa18.63■□□□□ 0.57
SCARB1-205ENST00000538291 hCG_1642624A0A1W2PR95 340 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 YARSP54577 528 aaKnown RBP18.62■□□□□ 0.57
SCARB1-205ENST00000538291 ZNF654Q8IZM8 581 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 GNA14O95837 355 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 SFMBT2Q5VUG0 894 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 SRGAP1Q7Z6B7 1085 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 CROCCP2Q86T23 111 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 IFT20Q8IY31 132 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 CEP104O60308 925 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 PCDHB13Q9Y5F0 798 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 SULF1Q8IWU6 871 aa18.62■□□□□ 0.57
SCARB1-205ENST00000538291 DCPSQ96C86 337 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms