RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CACNA2D3Q8IZS8 1091 aa9.54□□□□□ -0.88
SRGAP1-202ENST00000537556 MAP4K1Q92918 833 aa9.54□□□□□ -0.88
SRGAP1-202ENST00000537556 RBM17Q96I25 401 aaKnown RBP9.54□□□□□ -0.88
SRGAP1-202ENST00000537556 SIL1Q9H173 461 aa9.54□□□□□ -0.88
SRGAP1-202ENST00000537556 SLC5A4Q9NY91 659 aa9.54□□□□□ -0.88
SRGAP1-202ENST00000537556 UBN2Q6ZU65 1347 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 HIP1O00291 1037 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 SLC27A2O14975 620 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 ZMYND10O75800 440 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 YEATS4O95619 227 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 CSB-PGBD3P0DP91 1061 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 ALDH1B1P30837 517 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 MXRA7P84157 204 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 TMTC1Q8IUR5 882 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 HMG20BQ9P0W2 317 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 NEDD4P46934 1319 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 RIMS2Q9UQ26 1411 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 LMTK2Q8IWU2 1503 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 RBM47A0AV96 593 aaKnown RBP9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 GMNCA6NCL1 334 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 CFAP73A6NFT4 308 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 KRT32Q14532 448 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 CNGA4Q8IV77 575 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 GSPT2Q8IYD1 628 aaKnown RBP9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 C1orf131Q8NDD1 294 aaKnown RBP9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 ACRBPQ8NEB7 543 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 CAGE1Q8TC20 777 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 TEKT4Q8WW24 435 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 HVCN1Q96D96 273 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 MMS19Q96T76 1030 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 OSBPL1AQ9BXW6 950 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 ANKIB1Q9P2G1 1089 aa9.53□□□□□ -0.88
SRGAP1-202ENST00000537556 GOLGA6L10A0A0M3HER8 536 aa9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 DIAPH2O60879 1101 aa9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 NPTXRO95502 500 aa9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 CCND1P24385 295 aa9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 RASA3Q14644 834 aa9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 NUTM2DQ5VT03 806 aaPredicted RBP9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 CCDC63Q8NA47 563 aa9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 LINC00301Q8NCQ3 95 aa9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 ARHGEF1Q92888 912 aaKnown RBP9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 L3MBTL3Q96JM7 780 aaPredicted RBP9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 DACH1Q9UI36 760 aa9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 PHF8Q9UPP1 1060 aa9.52□□□□□ -0.88
SRGAP1-202ENST00000537556 HMGB1P1B2RPK0 211 aaPredicted RBP9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 PSMD14O00487 310 aa9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 CMA1P23946 247 aa9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 ALDH3A1P30838 453 aa9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 MRPS35P82673 323 aaKnown RBP9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 HDGFL1Q5TGJ6 251 aa9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 NUGGCQ68CJ6 796 aa9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 KCTD16Q68DU8 428 aa9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 MAATS1Q7Z4T9 603 aa9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 TCEANC2Q96MN5 208 aa9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 RANBP17Q9H2T7 1088 aaKnown RBP9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 DNAAF2Q9NVR5 837 aaKnown RBP9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 CEMIPQ8WUJ3 1361 aa9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 ZFYVE9O95405 1425 aa9.52□□□□□ -0.89
SRGAP1-202ENST00000537556 SPTLC2O15270 562 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 GSTA1P08263 222 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 CLTAP09496 248 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 ZBED6P86452 979 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 ENOX2Q16206 610 aaKnown RBP9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 GKAP1Q5VSY0 366 aaPredicted RBP9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 FAM114A1Q8IWE2 563 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 SH2D3CQ8N5H7 860 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 CAVIN3Q969G5 261 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 SEC16BQ96JE7 1060 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 TRIM7Q9C029 511 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 SENP2Q9HC62 589 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 PPANQ9NQ55 473 aaKnown RBP9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 MIS18AQ9NYP9 233 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 ADGRF5Q8IZF2 1346 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 ATP10BO94823 1461 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 VIMP08670 466 aaKnown RBP9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 NR1I3Q14994 352 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 KIAA0753Q2KHM9 967 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 CFAP58Q5T655 872 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 PAPD7Q5XG87 772 aaKnown RBP9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 SYNE3Q6ZMZ3 975 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 PNMA8AQ86V59 439 aaPredicted RBP9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 RHPN1Q8TCX5 695 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 RBM33Q96EV2 1170 aaKnown RBP9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 WDR35Q9P2L0 1181 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 WWC3Q9ULE0 1092 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 L3MBTL1Q9Y468 752 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 SBNO1A3KN83 1393 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 VWDEQ8N2E2 1590 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 PREX1Q8TCU6 1659 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 ABCC6O95255 1503 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 SH3TC1Q8TE82 1336 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 A0A0U1RQJ8 604 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 NUTM2FA1L443 756 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 PPIP5K2O43314 1243 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 CDC25CP30307 473 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 SYKP43405 635 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 DEUP1Q05D60 604 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 SEPT2Q15019 361 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 HSP90AB4PQ58FF6 505 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms