RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 RAB3GAP1Q15042 981 aa28.53■■■□□ 2.16
HMGA2-208ENST00000537429 RABEP1Q15276 862 aa28.53■■■□□ 2.16
HMGA2-208ENST00000537429 MTMR4Q9NYA4 1195 aa28.53■■■□□ 2.16
HMGA2-208ENST00000537429 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.53■■■□□ 2.16
HMGA2-208ENST00000537429 TNKSO95271 1327 aa28.53■■■□□ 2.16
HMGA2-208ENST00000537429 NEK4P51957 841 aa28.53■■■□□ 2.16
HMGA2-208ENST00000537429 SEC23AQ15436 765 aa28.53■■■□□ 2.16
HMGA2-208ENST00000537429 CCDC178Q5BJE1 867 aa28.53■■■□□ 2.16
HMGA2-208ENST00000537429 LRRC2Q9BYS8 371 aa28.53■■■□□ 2.16
HMGA2-208ENST00000537429 PICK1Q9NRD5 415 aa28.53■■■□□ 2.16
HMGA2-208ENST00000537429 IFIT3O14879 490 aaKnown RBP28.52■■■□□ 2.16
HMGA2-208ENST00000537429 SART3Q15020 963 aaKnown RBP28.52■■■□□ 2.16
HMGA2-208ENST00000537429 RCSD1Q6JBY9 416 aa28.52■■■□□ 2.16
HMGA2-208ENST00000537429 CLEC10AQ8IUN9 316 aa28.52■■■□□ 2.16
HMGA2-208ENST00000537429 SIAH1Q8IUQ4 282 aa28.52■■■□□ 2.16
HMGA2-208ENST00000537429 FBXL16Q8N461 479 aa28.52■■■□□ 2.16
HMGA2-208ENST00000537429 ENAHQ8N8S7 591 aaPredicted RBP28.52■■■□□ 2.16
HMGA2-208ENST00000537429 CLMNQ96JQ2 1002 aa28.52■■■□□ 2.16
HMGA2-208ENST00000537429 TTC14Q96N46 770 aa28.52■■■□□ 2.16
HMGA2-208ENST00000537429 PTPRAP18433 802 aa28.51■■■□□ 2.15
HMGA2-208ENST00000537429 DGKHQ86XP1 1220 aa28.51■■■□□ 2.15
HMGA2-208ENST00000537429 PDRG1Q9NUG6 133 aa28.51■■■□□ 2.15
HMGA2-208ENST00000537429 ERICH2A1L162 156 aa28.5■■■□□ 2.15
HMGA2-208ENST00000537429 TMEM88BA6NKF7 163 aa28.5■■■□□ 2.15
HMGA2-208ENST00000537429 USP17L5A8MUK1 530 aa28.5■■■□□ 2.15
HMGA2-208ENST00000537429 SH2B2O14492 632 aaPredicted RBP28.5■■■□□ 2.15
HMGA2-208ENST00000537429 ICA1Q05084 483 aa28.5■■■□□ 2.15
HMGA2-208ENST00000537429 TMEM67Q5HYA8 995 aa28.5■■■□□ 2.15
HMGA2-208ENST00000537429 Q6ZUG5 572 aa28.5■■■□□ 2.15
HMGA2-208ENST00000537429 ANKS1AQ92625 1134 aa28.5■■■□□ 2.15
HMGA2-208ENST00000537429 AGXT2Q9BYV1 514 aa28.5■■■□□ 2.15
HMGA2-208ENST00000537429 ALDH8A1Q9H2A2 487 aaPredicted RBP28.5■■■□□ 2.15
HMGA2-208ENST00000537429 GPHNQ9NQX3 736 aaPredicted RBP28.5■■■□□ 2.15
HMGA2-208ENST00000537429 NYAP2Q9P242 653 aa28.5■■■□□ 2.15
HMGA2-208ENST00000537429 TTLL1O95922 423 aa28.49■■■□□ 2.15
HMGA2-208ENST00000537429 PPP4R3BQ5MIZ7 849 aa28.49■■■□□ 2.15
HMGA2-208ENST00000537429 CCDC84Q86UT8 332 aaPredicted RBP28.49■■■□□ 2.15
HMGA2-208ENST00000537429 STX8Q9UNK0 236 aa28.49■■■□□ 2.15
HMGA2-208ENST00000537429 EEF2P13639 858 aaKnown RBP28.48■■■□□ 2.15
HMGA2-208ENST00000537429 LIFRP42702 1097 aa28.48■■■□□ 2.15
HMGA2-208ENST00000537429 HUNKP57058 714 aa28.48■■■□□ 2.15
HMGA2-208ENST00000537429 WTAPQ15007 396 aa28.48■■■□□ 2.15
HMGA2-208ENST00000537429 IL27Q8NEV9 243 aa28.48■■■□□ 2.15
HMGA2-208ENST00000537429 ELP3Q9H9T3 547 aa28.48■■■□□ 2.15
HMGA2-208ENST00000537429 LY9Q9HBG7 655 aa28.48■■■□□ 2.15
HMGA2-208ENST00000537429 ABT1Q9ULW3 272 aaKnown RBP28.48■■■□□ 2.15
HMGA2-208ENST00000537429 SAPCD2Q86UD0 394 aa28.48■■■□□ 2.15
HMGA2-208ENST00000537429 MKL1Q969V6 931 aa28.48■■■□□ 2.15
HMGA2-208ENST00000537429 SENP2Q9HC62 589 aa28.48■■■□□ 2.15
HMGA2-208ENST00000537429 CLIP2Q9UDT6 1046 aa28.48■■■□□ 2.15
HMGA2-208ENST00000537429 PHIPQ8WWQ0 1821 aa28.47■■■□□ 2.15
HMGA2-208ENST00000537429 IFIT1BQ5T764 474 aaKnown RBP28.47■■■□□ 2.15
HMGA2-208ENST00000537429 ERO1BQ86YB8 467 aa28.47■■■□□ 2.15
HMGA2-208ENST00000537429 TMTC2Q8N394 836 aa28.47■■■□□ 2.15
HMGA2-208ENST00000537429 SLC10A4Q96EP9 437 aa28.47■■■□□ 2.15
HMGA2-208ENST00000537429 WDR18Q9BV38 432 aa28.47■■■□□ 2.15
HMGA2-208ENST00000537429 ZHX2Q9Y6X8 837 aa28.47■■■□□ 2.15
HMGA2-208ENST00000537429 A0A1W2PRG0 241 aa28.46■■■□□ 2.15
HMGA2-208ENST00000537429 SPDYE5A6NIY4 337 aa28.46■■■□□ 2.15
HMGA2-208ENST00000537429 FGD1P98174 961 aa28.46■■■□□ 2.15
HMGA2-208ENST00000537429 TOB2Q14106 344 aaPredicted RBP28.46■■■□□ 2.15
HMGA2-208ENST00000537429 TMEM47Q9BQJ4 181 aa28.46■■■□□ 2.15
HMGA2-208ENST00000537429 TBC1D2Q9BYX2 928 aa28.46■■■□□ 2.15
HMGA2-208ENST00000537429 AS3MTQ9HBK9 375 aa28.46■■■□□ 2.15
HMGA2-208ENST00000537429 TLL2Q9Y6L7 1015 aa28.46■■■□□ 2.15
HMGA2-208ENST00000537429 APLP1P51693 650 aa28.45■■■□□ 2.15
HMGA2-208ENST00000537429 ATP2B2Q01814 1243 aa28.45■■■□□ 2.15
HMGA2-208ENST00000537429 PPATQ06203 517 aa28.45■■■□□ 2.15
HMGA2-208ENST00000537429 SGMS1Q86VZ5 419 aa28.45■■■□□ 2.15
HMGA2-208ENST00000537429 ACER1Q8TDN7 264 aa28.45■■■□□ 2.15
HMGA2-208ENST00000537429 CNKSR2Q8WXI2 1034 aa28.45■■■□□ 2.15
HMGA2-208ENST00000537429 ARHGEF10LQ9HCE6 1279 aa28.45■■■□□ 2.15
HMGA2-208ENST00000537429 MYH4Q9Y623 1939 aa28.45■■■□□ 2.14
HMGA2-208ENST00000537429 TOP1P11387 765 aaKnown RBP28.44■■■□□ 2.14
HMGA2-208ENST00000537429 ECE1P42892 770 aa28.44■■■□□ 2.14
HMGA2-208ENST00000537429 AK2P54819 239 aa28.44■■■□□ 2.14
HMGA2-208ENST00000537429 ZNF280CQ8ND82 737 aa28.44■■■□□ 2.14
HMGA2-208ENST00000537429 BRF1Q92994 677 aa28.44■■■□□ 2.14
HMGA2-208ENST00000537429 TMX2Q9Y320 296 aa28.44■■■□□ 2.14
HMGA2-208ENST00000537429 AFG3L2Q9Y4W6 797 aa28.44■■■□□ 2.14
HMGA2-208ENST00000537429 OPTNQ96CV9 577 aa28.43■■■□□ 2.14
HMGA2-208ENST00000537429 SYNPO2Q9UMS6 1093 aa28.43■■■□□ 2.14
HMGA2-208ENST00000537429 ST18O60284 1047 aa28.43■■■□□ 2.14
HMGA2-208ENST00000537429 SPP2Q13103 211 aa28.43■■■□□ 2.14
HMGA2-208ENST00000537429 KAT14Q9H8E8 782 aa28.43■■■□□ 2.14
HMGA2-208ENST00000537429 EVCP57679 992 aa28.42■■■□□ 2.14
HMGA2-208ENST00000537429 ANKRD1Q15327 319 aa28.42■■■□□ 2.14
HMGA2-208ENST00000537429 LRRC47Q8N1G4 583 aaKnown RBP28.42■■■□□ 2.14
HMGA2-208ENST00000537429 OTUD5Q96G74 571 aa28.42■■■□□ 2.14
HMGA2-208ENST00000537429 PPIL2Q13356 520 aa28.41■■■□□ 2.14
HMGA2-208ENST00000537429 PNMA1Q8ND90 353 aa28.41■■■□□ 2.14
HMGA2-208ENST00000537429 KIAA1683Q9H0B3 1180 aa28.41■■■□□ 2.14
HMGA2-208ENST00000537429 SH2D4AQ9H788 454 aa28.41■■■□□ 2.14
HMGA2-208ENST00000537429 BRPF3Q9ULD4 1205 aa28.41■■■□□ 2.14
HMGA2-208ENST00000537429 CCDC69A6NI79 296 aa28.4■■■□□ 2.14
HMGA2-208ENST00000537429 USP17L10C9JJH3 530 aa28.4■■■□□ 2.14
HMGA2-208ENST00000537429 ZNF157P51786 506 aaPredicted RBP28.4■■■□□ 2.14
HMGA2-208ENST00000537429 APOBRQ0VD83 1088 aa28.4■■■□□ 2.14
HMGA2-208ENST00000537429 NFXL1Q6ZNB6 911 aa28.4■■■□□ 2.14
HMGA2-208ENST00000537429 CREBZFQ9NS37 354 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms