RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 RASSF10A6NK89 507 aa9.51□□□□□ -0.89
CCDC60-203ENST00000536742 POLR3DP05423 398 aaPredicted RBP9.51□□□□□ -0.89
CCDC60-203ENST00000536742 GATA4P43694 442 aa9.51□□□□□ -0.89
CCDC60-203ENST00000536742 PRPF40BQ6NWY9 871 aaKnown RBP9.51□□□□□ -0.89
CCDC60-203ENST00000536742 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
CCDC60-203ENST00000536742 GIPC2Q8TF65 315 aa9.51□□□□□ -0.89
CCDC60-203ENST00000536742 NUDT8Q8WV74 236 aa9.51□□□□□ -0.89
CCDC60-203ENST00000536742 NACC1Q96RE7 527 aa9.51□□□□□ -0.89
CCDC60-203ENST00000536742 KRTAP4-6Q9BYQ5 205 aa9.51□□□□□ -0.89
CCDC60-203ENST00000536742 CUL9Q8IWT3 2517 aa9.51□□□□□ -0.89
CCDC60-203ENST00000536742 LY75O60449 1722 aa9.51□□□□□ -0.89
CCDC60-203ENST00000536742 CCDC7Q96M83 1385 aa9.5□□□□□ -0.89
CCDC60-203ENST00000536742 ARFGEF1Q9Y6D6 1849 aa9.5□□□□□ -0.89
CCDC60-203ENST00000536742 A0A0G2JLW4 131 aa9.5□□□□□ -0.89
CCDC60-203ENST00000536742 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
CCDC60-203ENST00000536742 GADD45BO75293 160 aaPredicted RBP9.5□□□□□ -0.89
CCDC60-203ENST00000536742 XRCC5P13010 732 aaKnown RBP9.5□□□□□ -0.89
CCDC60-203ENST00000536742 ZNF16P17020 682 aaPredicted RBP9.5□□□□□ -0.89
CCDC60-203ENST00000536742 SAFB2Q14151 953 aaKnown RBP eCLIP9.5□□□□□ -0.89
CCDC60-203ENST00000536742 PRAM1Q96QH2 718 aa9.5□□□□□ -0.89
CCDC60-203ENST00000536742 ZKSCAN3Q9BRR0 538 aa9.5□□□□□ -0.89
CCDC60-203ENST00000536742 SMG9Q9H0W8 520 aaKnown RBP9.5□□□□□ -0.89
CCDC60-203ENST00000536742 MUC3BQ9H195 1237 aa9.5□□□□□ -0.89
CCDC60-203ENST00000536742 EHD4Q9H223 541 aa9.5□□□□□ -0.89
CCDC60-203ENST00000536742 N4BP2Q86UW6 1770 aaPredicted RBP9.5□□□□□ -0.89
CCDC60-203ENST00000536742 KIF13BQ9NQT8 1826 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 SBF1O95248 1867 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 ITSN1Q15811 1721 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 FAM177BA6PVY3 158 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 NFKBIEO00221 500 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 PDE2AO00408 941 aaPredicted RBP9.49□□□□□ -0.89
CCDC60-203ENST00000536742 CA12O43570 354 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 NID1P14543 1247 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 PTPN12Q05209 780 aaKnown RBP9.49□□□□□ -0.89
CCDC60-203ENST00000536742 COL9A3Q14050 684 aaPredicted RBP9.49□□□□□ -0.89
CCDC60-203ENST00000536742 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCDC60-203ENST00000536742 TMC4Q7Z404 712 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 CCNJLQ8IV13 435 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 DUSP9Q99956 384 aaKnown RBP9.49□□□□□ -0.89
CCDC60-203ENST00000536742 RASSF4Q9H2L5 321 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 POGKQ9P215 609 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 PASKQ96RG2 1323 aa9.49□□□□□ -0.89
CCDC60-203ENST00000536742 VPS8Q8N3P4 1428 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 EIF4EBP3O60516 100 aaPredicted RBP9.48□□□□□ -0.89
CCDC60-203ENST00000536742 PTPRAP18433 802 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 RAC1P63000 192 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 DAB2P98082 770 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 CEP135Q66GS9 1140 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 EPS8L3Q8TE67 593 aaKnown RBP9.48□□□□□ -0.89
CCDC60-203ENST00000536742 NXPE3Q969Y0 559 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 LIN7BQ9HAP6 207 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 ADGRF5Q8IZF2 1346 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 USP54Q70EL1 1684 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 KIAA1551Q9HCM1 1747 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 PPIP5K1Q6PFW1 1433 aa9.48□□□□□ -0.89
CCDC60-203ENST00000536742 ATP11AP98196 1134 aa9.47□□□□□ -0.89
CCDC60-203ENST00000536742 DOC2BQ14184 412 aa9.47□□□□□ -0.89
CCDC60-203ENST00000536742 DCAF11Q8TEB1 546 aa9.47□□□□□ -0.89
CCDC60-203ENST00000536742 ADAM19Q9H013 955 aa9.47□□□□□ -0.89
CCDC60-203ENST00000536742 PARP2Q9UGN5 583 aa9.47□□□□□ -0.89
CCDC60-203ENST00000536742 ADAMTS7Q9UKP4 1686 aa9.47□□□□□ -0.89
CCDC60-203ENST00000536742 A0A0C4DFX4 3053 aa9.46□□□□□ -0.89
CCDC60-203ENST00000536742 QRICH2Q9H0J4 1663 aa9.46□□□□□ -0.89
CCDC60-203ENST00000536742 DPEP1P16444 411 aa9.46□□□□□ -0.9
CCDC60-203ENST00000536742 AFF1P51825 1210 aaKnown RBP9.46□□□□□ -0.9
CCDC60-203ENST00000536742 PSMD2Q13200 908 aa9.46□□□□□ -0.9
CCDC60-203ENST00000536742 GRM2Q14416 872 aa9.46□□□□□ -0.9
CCDC60-203ENST00000536742 TCF12Q99081 682 aa9.46□□□□□ -0.9
CCDC60-203ENST00000536742 C12orf49Q9H741 205 aa9.46□□□□□ -0.9
CCDC60-203ENST00000536742 SRA1Q9HD15 236 aaKnown RBP9.46□□□□□ -0.9
CCDC60-203ENST00000536742 LATS2Q9NRM7 1088 aa9.46□□□□□ -0.9
CCDC60-203ENST00000536742 PIM2Q9P1W9 311 aa9.46□□□□□ -0.9
CCDC60-203ENST00000536742 FAM8A1Q9UBU6 413 aa9.46□□□□□ -0.9
CCDC60-203ENST00000536742 AK5Q9Y6K8 562 aa9.46□□□□□ -0.9
CCDC60-203ENST00000536742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.46□□□□□ -0.9
CCDC60-203ENST00000536742 BRCA1P38398 1863 aaKnown RBP9.46□□□□□ -0.9
CCDC60-203ENST00000536742 EIF4BP23588 611 aaKnown RBP9.45□□□□□ -0.9
CCDC60-203ENST00000536742 VAMP1P23763 118 aa9.45□□□□□ -0.9
CCDC60-203ENST00000536742 ECE1P42892 770 aa9.45□□□□□ -0.9
CCDC60-203ENST00000536742 GRIK4Q16099 956 aa9.45□□□□□ -0.9
CCDC60-203ENST00000536742 BSNDQ8WZ55 320 aa9.45□□□□□ -0.9
CCDC60-203ENST00000536742 SYTL4Q96C24 671 aaPredicted RBP9.45□□□□□ -0.9
CCDC60-203ENST00000536742 POP1Q99575 1024 aaKnown RBP9.45□□□□□ -0.9
CCDC60-203ENST00000536742 BCO2Q9BYV7 579 aa9.45□□□□□ -0.9
CCDC60-203ENST00000536742 MRS2Q9HD23 443 aa9.45□□□□□ -0.9
CCDC60-203ENST00000536742 NSD3Q9BZ95 1437 aa9.45□□□□□ -0.9
CCDC60-203ENST00000536742 CASP8AP2Q9UKL3 1982 aa9.44□□□□□ -0.9
CCDC60-203ENST00000536742 SORBS3O60504 671 aa9.44□□□□□ -0.9
CCDC60-203ENST00000536742 LMNB1P20700 586 aa9.44□□□□□ -0.9
CCDC60-203ENST00000536742 ITPKAP23677 461 aa9.44□□□□□ -0.9
CCDC60-203ENST00000536742 CDC27P30260 824 aa9.44□□□□□ -0.9
CCDC60-203ENST00000536742 GSTT1P30711 240 aa9.44□□□□□ -0.9
CCDC60-203ENST00000536742 GRIK5Q16478 980 aa9.44□□□□□ -0.9
CCDC60-203ENST00000536742 DALRD3Q5D0E6 543 aaKnown RBP9.44□□□□□ -0.9
CCDC60-203ENST00000536742 RPS26P11Q5JNZ5 115 aaPredicted RBP9.44□□□□□ -0.9
CCDC60-203ENST00000536742 MAP4K3Q8IVH8 894 aa9.44□□□□□ -0.9
CCDC60-203ENST00000536742 ANKRD24Q8TF21 1146 aa9.44□□□□□ -0.9
CCDC60-203ENST00000536742 FOXD4L4Q8WXT5 416 aaPredicted RBP9.44□□□□□ -0.9
CCDC60-203ENST00000536742 SETDB2Q96T68 719 aa9.44□□□□□ -0.9
CCDC60-203ENST00000536742 THSD7BQ9C0I4 1608 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms