RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 COBLO75128 1261 aa16.41■□□□□ 0.22
CDH20-202ENST00000536675 CCT6AP40227 531 aaKnown RBP16.41■□□□□ 0.22
CDH20-202ENST00000536675 CCDC82Q8N4S0 544 aa16.41■□□□□ 0.22
CDH20-202ENST00000536675 ACBD3Q9H3P7 528 aa16.41■□□□□ 0.22
CDH20-202ENST00000536675 PLEKHA4Q9H4M7 779 aa16.41■□□□□ 0.22
CDH20-202ENST00000536675 TACC3Q9Y6A5 838 aa16.41■□□□□ 0.22
CDH20-202ENST00000536675 ITIH6Q6UXX5 1313 aa16.41■□□□□ 0.22
CDH20-202ENST00000536675 WDR17Q8IZU2 1322 aa16.41■□□□□ 0.22
CDH20-202ENST00000536675 SEMA3EO15041 775 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 CDC25AP30304 524 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 TTC31Q49AM3 519 aaPredicted RBP16.4■□□□□ 0.22
CDH20-202ENST00000536675 TAF7LQ5H9L4 462 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 CMTR1Q8N1G2 835 aaKnown RBP16.4■□□□□ 0.22
CDH20-202ENST00000536675 PAGE5Q96GU1 130 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 EPSTI1Q96J88 318 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 ABHD10Q9NUJ1 306 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 MYO1AQ9UBC5 1043 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 ZNF532Q9HCE3 1301 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 LRP6O75581 1613 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 RNF40O75150 1001 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 IDH1O75874 414 aaKnown RBP16.4■□□□□ 0.22
CDH20-202ENST00000536675 SYF2O95926 243 aaKnown RBP16.4■□□□□ 0.22
CDH20-202ENST00000536675 CORO7P57737 925 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 CTDSPL2Q05D32 466 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 KRT28Q7Z3Y7 464 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 SH3RF1Q7Z6J0 888 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 CABP5Q9NP86 173 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 CEP131Q9UPN4 1083 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 TRIM22Q8IYM9 498 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 TBC1D2BQ9UPU7 963 aa16.4■□□□□ 0.22
CDH20-202ENST00000536675 RIC1Q4ADV7 1423 aa16.39■□□□□ 0.21
CDH20-202ENST00000536675 AARSP49588 968 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDH20-202ENST00000536675 DPYDQ12882 1025 aa16.39■□□□□ 0.21
CDH20-202ENST00000536675 UBE3CQ15386 1083 aa16.39■□□□□ 0.21
CDH20-202ENST00000536675 ICE2Q659A1 982 aa16.39■□□□□ 0.21
CDH20-202ENST00000536675 CYP26C1Q6V0L0 522 aa16.39■□□□□ 0.21
CDH20-202ENST00000536675 PRPF6O94906 941 aaKnown RBP16.39■□□□□ 0.21
CDH20-202ENST00000536675 KRT31Q15323 416 aa16.39■□□□□ 0.21
CDH20-202ENST00000536675 RTN1Q16799 776 aa16.39■□□□□ 0.21
CDH20-202ENST00000536675 CCDC148Q8NFR7 591 aa16.39■□□□□ 0.21
CDH20-202ENST00000536675 STRBPQ96SI9 672 aaKnown RBP16.39■□□□□ 0.21
CDH20-202ENST00000536675 VIPAS39Q9H9C1 493 aa16.39■□□□□ 0.21
CDH20-202ENST00000536675 AATFQ9NY61 560 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDH20-202ENST00000536675 AKAP17AQ02040 695 aaKnown RBP16.38■□□□□ 0.21
CDH20-202ENST00000536675 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
CDH20-202ENST00000536675 TRIM10Q9UDY6 481 aa16.38■□□□□ 0.21
CDH20-202ENST00000536675 CTNND2Q9UQB3 1225 aa16.38■□□□□ 0.21
CDH20-202ENST00000536675 NID2Q14112 1375 aa16.38■□□□□ 0.21
CDH20-202ENST00000536675 FAM205CA6NFA0 338 aa16.38■□□□□ 0.21
CDH20-202ENST00000536675 CSB-PGBD3P0DP91 1061 aa16.38■□□□□ 0.21
CDH20-202ENST00000536675 PDE6AP16499 860 aa16.38■□□□□ 0.21
CDH20-202ENST00000536675 AFAP1L1Q8TED9 768 aa16.38■□□□□ 0.21
CDH20-202ENST00000536675 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
CDH20-202ENST00000536675 MYH13Q9UKX3 1938 aa16.38■□□□□ 0.21
CDH20-202ENST00000536675 N4BP3O15049 544 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 PPFIA4O75335 1185 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 GTF2A1P52655 376 aaPredicted RBP16.37■□□□□ 0.21
CDH20-202ENST00000536675 USP14P54578 494 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 METTL24Q5JXM2 366 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 TRAPPC11Q7Z392 1133 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 CRACR2BQ8N4Y2 399 aaPredicted RBP16.37■□□□□ 0.21
CDH20-202ENST00000536675 GSDMAQ96QA5 445 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 ISCA1Q9BUE6 129 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 VPS16Q9H269 839 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 EPB41L4AQ9HCS5 686 aaPredicted RBP16.37■□□□□ 0.21
CDH20-202ENST00000536675 REXO2Q9Y3B8 237 aaKnown RBP16.37■□□□□ 0.21
CDH20-202ENST00000536675 TCRBV5S4A2TA0A5A2 114 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 DEXIO95424 95 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 IFIT5Q13325 482 aaKnown RBP16.37■□□□□ 0.21
CDH20-202ENST00000536675 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
CDH20-202ENST00000536675 PPM1EQ8WY54 764 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 SYMPKQ92797 1274 aaKnown RBP16.37■□□□□ 0.21
CDH20-202ENST00000536675 FAM89AQ96GI7 184 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 HDAC6Q9UBN7 1215 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 LIMA1Q9UHB6 759 aaKnown RBP16.37■□□□□ 0.21
CDH20-202ENST00000536675 HPCAL4Q9UM19 191 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 GUCA1BQ9UMX6 200 aa16.37■□□□□ 0.21
CDH20-202ENST00000536675 IRX3P78415 501 aaPredicted RBP16.36■□□□□ 0.21
CDH20-202ENST00000536675 ALX1Q15699 326 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 CTCFLQ8NI51 663 aaPredicted RBP16.36■□□□□ 0.21
CDH20-202ENST00000536675 AIDAQ96BJ3 306 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 CHP1Q99653 195 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 ZC3H4Q9UPT8 1303 aaKnown RBP16.36■□□□□ 0.21
CDH20-202ENST00000536675 ENC1O14682 589 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 IFNL3Q8IZI9 196 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 JRKLQ9Y4A0 524 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 RIPOR2Q9Y4F9 1068 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 BCL9LQ86UU0 1499 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 LRRC10BA6NIK2 292 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 KRT9P35527 623 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 RIN2Q8WYP3 895 aaPredicted RBP16.36■□□□□ 0.21
CDH20-202ENST00000536675 STAMQ92783 540 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 MMS19Q96T76 1030 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 TAB2Q9NYJ8 693 aa16.36■□□□□ 0.21
CDH20-202ENST00000536675 UBR2Q8IWV8 1755 aa16.35■□□□□ 0.21
CDH20-202ENST00000536675 TRIM75PA6NK02 468 aa16.35■□□□□ 0.21
CDH20-202ENST00000536675 CSF1RP07333 972 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms