RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 ZKSCAN1P17029 563 aaPredicted RBP13.55□□□□□ -0.24
LMO3-214ENST00000536509 CYP2B6P20813 491 aa13.55□□□□□ -0.24
LMO3-214ENST00000536509 RGS2P41220 211 aa13.55□□□□□ -0.24
LMO3-214ENST00000536509 ERVK-9P63128 1117 aa13.55□□□□□ -0.24
LMO3-214ENST00000536509 ERVK-24P63145 666 aa13.55□□□□□ -0.24
LMO3-214ENST00000536509 CCNA1P78396 465 aa13.55□□□□□ -0.24
LMO3-214ENST00000536509 C7orf61Q8IZ16 206 aa13.55□□□□□ -0.24
LMO3-214ENST00000536509 CLUAP1Q96AJ1 413 aa13.55□□□□□ -0.24
LMO3-214ENST00000536509 DBNDD2Q9BQY9 259 aa13.55□□□□□ -0.24
LMO3-214ENST00000536509 EHD4Q9H223 541 aa13.55□□□□□ -0.24
LMO3-214ENST00000536509 RBPJLQ9UBG7 517 aa13.55□□□□□ -0.24
LMO3-214ENST00000536509 NOP58Q9Y2X3 529 aaKnown RBP13.55□□□□□ -0.24
LMO3-214ENST00000536509 BCAR3O75815 825 aa13.54□□□□□ -0.24
LMO3-214ENST00000536509 USP14P54578 494 aa13.54□□□□□ -0.24
LMO3-214ENST00000536509 ADGRA1Q86SQ6 560 aa13.54□□□□□ -0.24
LMO3-214ENST00000536509 TMEM57Q8N5G2 664 aa13.54□□□□□ -0.24
LMO3-214ENST00000536509 USP6NLQ92738 828 aa13.54□□□□□ -0.24
LMO3-214ENST00000536509 C12orf42Q96LP6 360 aa13.54□□□□□ -0.24
LMO3-214ENST00000536509 APBA2Q99767 749 aa13.54□□□□□ -0.24
LMO3-214ENST00000536509 TXNRD2Q9NNW7 524 aa13.54□□□□□ -0.24
LMO3-214ENST00000536509 RYDENQ9NUL5 291 aaKnown RBP13.54□□□□□ -0.24
LMO3-214ENST00000536509 RABGAP1Q9Y3P9 1069 aa13.54□□□□□ -0.24
LMO3-214ENST00000536509 USP17L15C9J2P7 530 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 USP17L13C9JLJ4 530 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 USP17L11C9JVI0 530 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 USP17L18D6R9N7 530 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 USP17L22D6RA61 530 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 USP17L17D6RBQ6 530 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 USP17L19D6RCP7 530 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 USP17L20D6RJB6 530 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 GDF11O95390 407 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 CYP7A1P22680 504 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 ZAP70P43403 619 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 USP17L24Q0WX57 530 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 TRIM32Q13049 653 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 MORN1Q5T089 497 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 TATDN1Q6P1N9 297 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 GPR142Q7Z601 462 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 PLEKHH3Q7Z736 793 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 TTC6Q86TZ1 520 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 CWC22Q9HCG8 908 aaKnown RBP13.53□□□□□ -0.24
LMO3-214ENST00000536509 EMILIN3Q9NT22 766 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 SERPINB13Q9UIV8 391 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 FRMPD3Q5JV73 1810 aa13.53□□□□□ -0.24
LMO3-214ENST00000536509 IDH1O75874 414 aaKnown RBP13.52□□□□□ -0.25
LMO3-214ENST00000536509 GH2P01242 217 aa13.52□□□□□ -0.25
LMO3-214ENST00000536509 USP5P45974 858 aa13.52□□□□□ -0.25
LMO3-214ENST00000536509 JAG1P78504 1218 aa13.52□□□□□ -0.25
LMO3-214ENST00000536509 CACNB2Q08289 660 aaPredicted RBP13.52□□□□□ -0.25
LMO3-214ENST00000536509 MAP3K12Q12852 859 aa13.52□□□□□ -0.25
LMO3-214ENST00000536509 LRIT3Q3SXY7 679 aa13.52□□□□□ -0.25
LMO3-214ENST00000536509 LBX2Q6XYB7 198 aa13.52□□□□□ -0.25
LMO3-214ENST00000536509 FTSJ3Q8IY81 847 aaKnown RBP13.52□□□□□ -0.25
LMO3-214ENST00000536509 SLC17A8Q8NDX2 589 aa13.52□□□□□ -0.25
LMO3-214ENST00000536509 FEZ1Q99689 392 aa13.52□□□□□ -0.25
LMO3-214ENST00000536509 KIAA1683Q9H0B3 1180 aa13.52□□□□□ -0.25
LMO3-214ENST00000536509 PIH1D3Q9NQM4 214 aaKnown RBP13.52□□□□□ -0.25
LMO3-214ENST00000536509 SAP30BPQ9UHR5 308 aaKnown RBP13.52□□□□□ -0.25
LMO3-214ENST00000536509 DBNLQ9UJU6 430 aaKnown RBP13.52□□□□□ -0.25
LMO3-214ENST00000536509 SOX1O00570 391 aaPredicted RBP13.51□□□□□ -0.25
LMO3-214ENST00000536509 MSCO60682 206 aa13.51□□□□□ -0.25
LMO3-214ENST00000536509 COL6A1P12109 1028 aa13.51□□□□□ -0.25
LMO3-214ENST00000536509 MAP2K5Q13163 448 aa13.51□□□□□ -0.25
LMO3-214ENST00000536509 Q3C1V9 767 aa13.51□□□□□ -0.25
LMO3-214ENST00000536509 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
LMO3-214ENST00000536509 TDHQ8IZJ6 230 aa13.51□□□□□ -0.25
LMO3-214ENST00000536509 PAGR1Q9BTK6 254 aa13.51□□□□□ -0.25
LMO3-214ENST00000536509 PORCNQ9H237 461 aa13.51□□□□□ -0.25
LMO3-214ENST00000536509 CABP5Q9NP86 173 aa13.51□□□□□ -0.25
LMO3-214ENST00000536509 ZMYND8Q9ULU4 1186 aaPredicted RBP13.51□□□□□ -0.25
LMO3-214ENST00000536509 TNNQ9UQP3 1299 aa13.51□□□□□ -0.25
LMO3-214ENST00000536509 PFASO15067 1338 aa13.5□□□□□ -0.25
LMO3-214ENST00000536509 SLC15A5A6NIM6 579 aa13.5□□□□□ -0.25
LMO3-214ENST00000536509 MAGEA10P43363 369 aaPredicted RBP13.5□□□□□ -0.25
LMO3-214ENST00000536509 DYNLL1P63167 89 aaKnown RBP13.5□□□□□ -0.25
LMO3-214ENST00000536509 ABCB5Q2M3G0 1257 aa13.5□□□□□ -0.25
LMO3-214ENST00000536509 CERKLQ49MI3 558 aaPredicted RBP13.5□□□□□ -0.25
LMO3-214ENST00000536509 MFSD14CQ5VZR4 134 aa13.5□□□□□ -0.25
LMO3-214ENST00000536509 CATSPERGQ6ZRH7 1159 aa13.5□□□□□ -0.25
LMO3-214ENST00000536509 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
LMO3-214ENST00000536509 EDC3Q96F86 508 aaKnown RBP13.5□□□□□ -0.25
LMO3-214ENST00000536509 LRCH3Q96II8 777 aa13.5□□□□□ -0.25
LMO3-214ENST00000536509 IVNS1ABPQ9Y6Y0 642 aa13.5□□□□□ -0.25
LMO3-214ENST00000536509 HOXC6P09630 235 aa13.49□□□□□ -0.25
LMO3-214ENST00000536509 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
LMO3-214ENST00000536509 TTF1Q15361 905 aaPredicted RBP13.49□□□□□ -0.25
LMO3-214ENST00000536509 SHROOM1Q2M3G4 852 aaPredicted RBP13.49□□□□□ -0.25
LMO3-214ENST00000536509 HSP90AB4PQ58FF6 505 aa13.49□□□□□ -0.25
LMO3-214ENST00000536509 LHX8Q68G74 356 aa13.49□□□□□ -0.25
LMO3-214ENST00000536509 EAF2Q96CJ1 260 aaPredicted RBP13.49□□□□□ -0.25
LMO3-214ENST00000536509 UBE2OQ9C0C9 1292 aaKnown RBP13.49□□□□□ -0.25
LMO3-214ENST00000536509 CCDC8Q9H0W5 538 aaPredicted RBP13.49□□□□□ -0.25
LMO3-214ENST00000536509 MYH8P13535 1937 aa13.49□□□□□ -0.25
LMO3-214ENST00000536509 NAV1Q8NEY1 1877 aa13.48□□□□□ -0.25
LMO3-214ENST00000536509 SYN1P17600 705 aa13.48□□□□□ -0.25
LMO3-214ENST00000536509 VCAM1P19320 739 aa13.48□□□□□ -0.25
LMO3-214ENST00000536509 PTPREP23469 700 aa13.48□□□□□ -0.25
LMO3-214ENST00000536509 CCND3P30281 292 aaPredicted RBP13.48□□□□□ -0.25
LMO3-214ENST00000536509 ITPRIPQ8IWB1 547 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms