RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CCDC69A6NI79 296 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 KIF3CO14782 793 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 YY1P25490 414 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 MCM2P49736 904 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 IFIT1BQ5T764 474 aaKnown RBP13.52□□□□□ -0.25
CDCA3-206ENST00000536241 TMEM179Q6ZVK1 233 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 SIAH1Q8IUQ4 282 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 ZKSCAN4Q969J2 545 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-206ENST00000536241 WRNIP1Q96S55 665 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 KANSL2Q9H9L4 492 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-206ENST00000536241 CLIP2Q9UDT6 1046 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 NAP1L2Q9ULW6 460 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-206ENST00000536241 STX8Q9UNK0 236 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 MYH8P13535 1937 aa13.52□□□□□ -0.25
CDCA3-206ENST00000536241 SSC5DA1L4H1 1573 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 ITGBL1O95965 494 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-206ENST00000536241 SLC4A3P48751 1232 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 EVCP57679 992 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 ATP2B2Q01814 1243 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 TTLL12Q14166 644 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-206ENST00000536241 ME3Q16798 604 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 MOB2Q70IA6 237 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 SGMS1Q86VZ5 419 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 HSCBQ8IWL3 235 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 TMEM47Q9BQJ4 181 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 ZNF408Q9H9D4 720 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.51□□□□□ -0.25
CDCA3-206ENST00000536241 ZBTB21Q9ULJ3 1066 aa13.51□□□□□ -0.25
CDCA3-206ENST00000536241 K7ELQ4 463 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-206ENST00000536241 LARGE1O95461 756 aa13.5□□□□□ -0.25
CDCA3-206ENST00000536241 TTLL1O95922 423 aa13.5□□□□□ -0.25
CDCA3-206ENST00000536241 ASNSP08243 561 aa13.5□□□□□ -0.25
CDCA3-206ENST00000536241 EEF2P13639 858 aaKnown RBP13.5□□□□□ -0.25
CDCA3-206ENST00000536241 PDIA3P30101 505 aaKnown RBP13.5□□□□□ -0.25
CDCA3-206ENST00000536241 NOVP48745 357 aa13.5□□□□□ -0.25
CDCA3-206ENST00000536241 STK3Q13188 491 aa13.5□□□□□ -0.25
CDCA3-206ENST00000536241 CCDC84Q86UT8 332 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-206ENST00000536241 TMX3Q96JJ7 454 aa13.5□□□□□ -0.25
CDCA3-206ENST00000536241 ZSCAN31Q96LW9 406 aaPredicted RBP13.5□□□□□ -0.25
CDCA3-206ENST00000536241 MYL10Q9BUA6 226 aa13.5□□□□□ -0.25
CDCA3-206ENST00000536241 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
CDCA3-206ENST00000536241 SLC12A7Q9Y666 1083 aa13.5□□□□□ -0.25
CDCA3-206ENST00000536241 PLIN4Q96Q06 1357 aa13.5□□□□□ -0.25
CDCA3-206ENST00000536241 RXRAP19793 462 aa13.49□□□□□ -0.25
CDCA3-206ENST00000536241 IREB2P48200 963 aaKnown RBP13.49□□□□□ -0.25
CDCA3-206ENST00000536241 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
CDCA3-206ENST00000536241 BECN1Q14457 450 aa13.49□□□□□ -0.25
CDCA3-206ENST00000536241 SYNE3Q6ZMZ3 975 aa13.49□□□□□ -0.25
CDCA3-206ENST00000536241 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-206ENST00000536241 NECAB1Q8N987 351 aa13.49□□□□□ -0.25
CDCA3-206ENST00000536241 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.49□□□□□ -0.252e-7■■■■■ 42.5
CDCA3-206ENST00000536241 CHMP4CQ96CF2 233 aa13.49□□□□□ -0.25
CDCA3-206ENST00000536241 ZNF274Q96GC6 653 aaPredicted RBP13.49□□□□□ -0.25
CDCA3-206ENST00000536241 NYAP2Q9P242 653 aa13.49□□□□□ -0.25
CDCA3-206ENST00000536241 UBE2Q2LH0YL09 131 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 TOP1P11387 765 aaKnown RBP13.48□□□□□ -0.25
CDCA3-206ENST00000536241 ICA1Q05084 483 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 APOA5Q6Q788 366 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 ARMC9Q7Z3E5 817 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 CATIPQ7Z7H3 387 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 SCYL3Q8IZE3 742 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 ZNF654Q8IZM8 581 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 ZNF784Q8NCA9 323 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-206ENST00000536241 PNMA1Q8ND90 353 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 ACER1Q8TDN7 264 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 NUP133Q8WUM0 1156 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 MKL1Q969V6 931 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 SLKQ9H2G2 1235 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-206ENST00000536241 HPS5Q9UPZ3 1129 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 MTMR7Q9Y216 660 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 A0A1W2PRG0 241 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 ZBTB43O43298 467 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 CELF2O95319 508 aaKnown RBP13.48□□□□□ -0.25
CDCA3-206ENST00000536241 PTPRAP18433 802 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 ECE1P42892 770 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 TROAPQ12815 778 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 MAP3K11Q16584 847 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 PPP4R3BQ5MIZ7 849 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 CST9Q5W186 159 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 LRRC47Q8N1G4 583 aaKnown RBP13.48□□□□□ -0.25
CDCA3-206ENST00000536241 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 PICK1Q9NRD5 415 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 SH2B1Q9NRF2 756 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-206ENST00000536241 GINM1Q9NU53 330 aa13.48□□□□□ -0.25
CDCA3-206ENST00000536241 GOLGA8BA8MQT2 603 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 PFKFB2O60825 505 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 DTNBO60941 627 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 SCRN1Q12765 414 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 VGLL4Q14135 290 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 NOL9Q5SY16 702 aaKnown RBP13.47□□□□□ -0.25
CDCA3-206ENST00000536241 MICU3Q86XE3 530 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 CCDC83Q8IWF9 413 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 ANKRD13AQ8IZ07 590 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 FANCBQ8NB91 859 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms