RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 FBXO46Q6PJ61 603 aaPredicted RBP15.21■□□□□ 0.03
VPS37C-203ENST00000536000 OTOP1Q7RTM1 612 aa15.21■□□□□ 0.03
VPS37C-203ENST00000536000 ACER1Q8TDN7 264 aa15.21■□□□□ 0.03
VPS37C-203ENST00000536000 FAM227BQ96M60 508 aa15.21■□□□□ 0.03
VPS37C-203ENST00000536000 ZNF287Q9HBT7 754 aa15.21■□□□□ 0.03
VPS37C-203ENST00000536000 EPB41L4AQ9HCS5 686 aaPredicted RBP15.21■□□□□ 0.03
VPS37C-203ENST00000536000 EMILIN3Q9NT22 766 aa15.21■□□□□ 0.03
VPS37C-203ENST00000536000 PTPRFP10586 1907 aa15.2■□□□□ 0.02
VPS37C-203ENST00000536000 A0A0D9SFI3 127 aa15.2■□□□□ 0.02
VPS37C-203ENST00000536000 CCDC85CA6NKD9 419 aa15.2■□□□□ 0.02
VPS37C-203ENST00000536000 HIP1O00291 1037 aa15.2■□□□□ 0.02
VPS37C-203ENST00000536000 SLC3A2P08195 630 aaKnown RBP15.2■□□□□ 0.02
VPS37C-203ENST00000536000 BCRP11274 1271 aa15.2■□□□□ 0.02
VPS37C-203ENST00000536000 HOXA7P31268 230 aaPredicted RBP15.2■□□□□ 0.02
VPS37C-203ENST00000536000 IRX3P78415 501 aaPredicted RBP15.2■□□□□ 0.02
VPS37C-203ENST00000536000 LACTBP83111 547 aaPredicted RBP15.2■□□□□ 0.02
VPS37C-203ENST00000536000 ZNF444Q8N0Y2 327 aaPredicted RBP15.2■□□□□ 0.02
VPS37C-203ENST00000536000 KIAA1683Q9H0B3 1180 aa15.2■□□□□ 0.02
VPS37C-203ENST00000536000 ASCC2Q9H1I8 757 aaPredicted RBP15.2■□□□□ 0.02
VPS37C-203ENST00000536000 ADGRA2Q96PE1 1338 aa15.19■□□□□ 0.02
VPS37C-203ENST00000536000 ECM2O94769 699 aaPredicted RBP15.19■□□□□ 0.02
VPS37C-203ENST00000536000 HOXD10P28358 340 aa15.19■□□□□ 0.02
VPS37C-203ENST00000536000 PSMC4P43686 418 aa15.19■□□□□ 0.02
VPS37C-203ENST00000536000 GCLCP48506 637 aaPredicted RBP15.19■□□□□ 0.02
VPS37C-203ENST00000536000 MFAP1P55081 439 aaKnown RBP15.19■□□□□ 0.02
VPS37C-203ENST00000536000 PDE4BQ07343 736 aa15.19■□□□□ 0.02
VPS37C-203ENST00000536000 P2RX7Q99572 595 aaKnown RBP15.19■□□□□ 0.02
VPS37C-203ENST00000536000 KANSL2Q9H9L4 492 aa15.19■□□□□ 0.02
VPS37C-203ENST00000536000 ARHGEF10LQ9HCE6 1279 aa15.19■□□□□ 0.02
VPS37C-203ENST00000536000 DIAPH3Q9NSV4 1193 aa15.19■□□□□ 0.02
VPS37C-203ENST00000536000 PTPN22Q9Y2R2 807 aa15.19■□□□□ 0.02
VPS37C-203ENST00000536000 DDX60LQ5H9U9 1706 aaKnown RBP15.18■□□□□ 0.02
VPS37C-203ENST00000536000 FMNL1O95466 1100 aaPredicted RBP15.18■□□□□ 0.02
VPS37C-203ENST00000536000 GNRH1P01148 92 aa15.18■□□□□ 0.02
VPS37C-203ENST00000536000 RASA1P20936 1047 aa15.18■□□□□ 0.02
VPS37C-203ENST00000536000 PPARAQ07869 468 aa15.18■□□□□ 0.02
VPS37C-203ENST00000536000 ALX1Q15699 326 aa15.18■□□□□ 0.02
VPS37C-203ENST00000536000 TTC22Q5TAA0 569 aa15.18■□□□□ 0.02
VPS37C-203ENST00000536000 VPS53Q5VIR6 699 aa15.18■□□□□ 0.02
VPS37C-203ENST00000536000 CWC27Q6UX04 472 aaKnown RBP15.18■□□□□ 0.02
VPS37C-203ENST00000536000 ANKRD13CQ8N6S4 541 aa15.18■□□□□ 0.02
VPS37C-203ENST00000536000 C12orf42Q96LP6 360 aa15.18■□□□□ 0.02
VPS37C-203ENST00000536000 ARHGAP39Q9C0H5 1083 aa15.18■□□□□ 0.02
VPS37C-203ENST00000536000 A0A1W2PRG0 241 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 USP17L15C9J2P7 530 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 USP17L13C9JLJ4 530 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 USP17L11C9JVI0 530 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 USP17L18D6R9N7 530 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 USP17L22D6RA61 530 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 USP17L17D6RBQ6 530 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 USP17L19D6RCP7 530 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 USP17L20D6RJB6 530 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 NEFLP07196 543 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 CAP1Q01518 475 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 ATP2B2Q01814 1243 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 ICA1Q05084 483 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 USP17L24Q0WX57 530 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 SIAH1Q8IUQ4 282 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 SH2D4AQ9H788 454 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 HPS5Q9UPZ3 1129 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 CCDC171Q6TFL3 1326 aa15.17■□□□□ 0.02
VPS37C-203ENST00000536000 FOXP2O15409 715 aa15.16■□□□□ 0.02
VPS37C-203ENST00000536000 PRDM1O75626 825 aa15.16■□□□□ 0.02
VPS37C-203ENST00000536000 FGAP02671 866 aa15.16■□□□□ 0.02
VPS37C-203ENST00000536000 HSPD1P10809 573 aaKnown RBP15.16■□□□□ 0.02
VPS37C-203ENST00000536000 EEF2P13639 858 aaKnown RBP15.16■□□□□ 0.02
VPS37C-203ENST00000536000 FCGRTP55899 365 aa15.16■□□□□ 0.02
VPS37C-203ENST00000536000 CATSPERGQ6ZRH7 1159 aa15.16■□□□□ 0.02
VPS37C-203ENST00000536000 CENPQQ7L2Z9 268 aaPredicted RBP15.16■□□□□ 0.02
VPS37C-203ENST00000536000 ZNF589Q86UQ0 364 aaPredicted RBP15.16■□□□□ 0.02
VPS37C-203ENST00000536000 TMX2Q9Y320 296 aa15.16■□□□□ 0.02
VPS37C-203ENST00000536000 MYH8P13535 1937 aa15.15■□□□□ 0.02
VPS37C-203ENST00000536000 GSPT1P15170 499 aaKnown RBP15.15■□□□□ 0.02
VPS37C-203ENST00000536000 PRMT2P55345 433 aa15.15■□□□□ 0.02
VPS37C-203ENST00000536000 HERVK_113P62684 666 aa15.15■□□□□ 0.02
VPS37C-203ENST00000536000 CTDSPL2Q05D32 466 aa15.15■□□□□ 0.02
VPS37C-203ENST00000536000 FAM110CQ1W6H9 321 aa15.15■□□□□ 0.02
VPS37C-203ENST00000536000 CLEC10AQ8IUN9 316 aa15.15■□□□□ 0.02
VPS37C-203ENST00000536000 GTF3C2Q8WUA4 911 aaPredicted RBP15.15■□□□□ 0.02
VPS37C-203ENST00000536000 TRIM47Q96LD4 638 aa15.15■□□□□ 0.02
VPS37C-203ENST00000536000 RPAP3Q9H6T3 665 aaPredicted RBP15.15■□□□□ 0.02
VPS37C-203ENST00000536000 ROBO3Q96MS0 1386 aa15.14■□□□□ 0.01
VPS37C-203ENST00000536000 CENPBP07199 599 aaPredicted RBP15.14■□□□□ 0.01
VPS37C-203ENST00000536000 VCAM1P19320 739 aa15.14■□□□□ 0.01
VPS37C-203ENST00000536000 CTGFP29279 349 aa15.14■□□□□ 0.01
VPS37C-203ENST00000536000 CCDC136Q96JN2 1154 aa15.14■□□□□ 0.01
VPS37C-203ENST00000536000 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.14■□□□□ 0.01
VPS37C-203ENST00000536000 VCPKMTQ9H867 229 aa15.14■□□□□ 0.01
VPS37C-203ENST00000536000 NYAP2Q9P242 653 aa15.14■□□□□ 0.01
VPS37C-203ENST00000536000 SRRDQ9UH36 339 aa15.14■□□□□ 0.01
VPS37C-203ENST00000536000 ANAPC4Q9UJX5 808 aa15.14■□□□□ 0.01
VPS37C-203ENST00000536000 TNPO2O14787 897 aaKnown RBP15.13■□□□□ 0.01
VPS37C-203ENST00000536000 RAD21O60216 631 aa15.13■□□□□ 0.01
VPS37C-203ENST00000536000 TSPY3P0CV98 308 aa15.13■□□□□ 0.01
VPS37C-203ENST00000536000 TSPY8P0CW00 308 aa15.13■□□□□ 0.01
VPS37C-203ENST00000536000 TFAP4Q01664 338 aa15.13■□□□□ 0.01
VPS37C-203ENST00000536000 COG2Q14746 738 aa15.13■□□□□ 0.01
VPS37C-203ENST00000536000 GPRC5AQ8NFJ5 357 aa15.13■□□□□ 0.01
VPS37C-203ENST00000536000 NEDD1Q8NHV4 660 aa15.13■□□□□ 0.01
VPS37C-203ENST00000536000 RUFY2Q8WXA3 655 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms