RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 TTLL12Q14166 644 aaPredicted RBP19.07■□□□□ 0.64
VAMP1-205ENST00000535927 PPP2R5BQ15173 497 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 SGMS1Q86VZ5 419 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 STK11IPQ8N1F8 1099 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 IGDCC4Q8TDY8 1250 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 ZBTB21Q9ULJ3 1066 aa19.07■□□□□ 0.64
VAMP1-205ENST00000535927 MPHOSPH10O00566 681 aaKnown RBP19.06■□□□□ 0.64
VAMP1-205ENST00000535927 CELF2O95319 508 aaKnown RBP19.06■□□□□ 0.64
VAMP1-205ENST00000535927 GH2P01242 217 aa19.06■□□□□ 0.64
VAMP1-205ENST00000535927 EVCP57679 992 aa19.06■□□□□ 0.64
VAMP1-205ENST00000535927 WTAPQ15007 396 aa19.06■□□□□ 0.64
VAMP1-205ENST00000535927 FAM47AQ5JRC9 791 aa19.06■□□□□ 0.64
VAMP1-205ENST00000535927 CYB5R4Q7L1T6 521 aa19.06■□□□□ 0.64
VAMP1-205ENST00000535927 WDR18Q9BV38 432 aa19.06■□□□□ 0.64
VAMP1-205ENST00000535927 ARHGEF10LQ9HCE6 1279 aa19.06■□□□□ 0.64
VAMP1-205ENST00000535927 TOP1P11387 765 aaKnown RBP19.05■□□□□ 0.64
VAMP1-205ENST00000535927 ANTXR2P58335 489 aa19.05■□□□□ 0.64
VAMP1-205ENST00000535927 SEC23AQ15436 765 aa19.05■□□□□ 0.64
VAMP1-205ENST00000535927 TMEM67Q5HYA8 995 aa19.05■□□□□ 0.64
VAMP1-205ENST00000535927 SYNE3Q6ZMZ3 975 aa19.05■□□□□ 0.64
VAMP1-205ENST00000535927 ERO1BQ86YB8 467 aa19.05■□□□□ 0.64
VAMP1-205ENST00000535927 HHIPL1Q96JK4 782 aa19.05■□□□□ 0.64
VAMP1-205ENST00000535927 MAP3K14Q99558 947 aa19.05■□□□□ 0.64
VAMP1-205ENST00000535927 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.05■□□□□ 0.64
VAMP1-205ENST00000535927 IL17RBQ9NRM6 502 aa19.05■□□□□ 0.64
VAMP1-205ENST00000535927 DOCK1Q14185 1865 aa19.05■□□□□ 0.64
VAMP1-205ENST00000535927 TNKSO95271 1327 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 FAM196BA6NMK8 535 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 C19orf81C9J6K1 198 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 TRAF5O00463 557 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 CALM1P0DP23 149 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 CALM2P0DP24 149 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 CALM3P0DP25 149 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 PPATQ06203 517 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 IFIT1BQ5T764 474 aaKnown RBP19.04■□□□□ 0.64
VAMP1-205ENST00000535927 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.04■□□□□ 0.64
VAMP1-205ENST00000535927 ENAHQ8N8S7 591 aaPredicted RBP19.04■□□□□ 0.64
VAMP1-205ENST00000535927 SNX21Q969T3 373 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 ZNF274Q96GC6 653 aaPredicted RBP19.04■□□□□ 0.64
VAMP1-205ENST00000535927 CEP95Q96GE4 821 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 ZSCAN31Q96LW9 406 aaPredicted RBP19.04■□□□□ 0.64
VAMP1-205ENST00000535927 UPF3BQ9BZI7 483 aaKnown RBP19.04■□□□□ 0.64
VAMP1-205ENST00000535927 ATAD5Q96QE3 1844 aa19.04■□□□□ 0.64
VAMP1-205ENST00000535927 SH2B2O14492 632 aaPredicted RBP19.03■□□□□ 0.64
VAMP1-205ENST00000535927 PTPRAP18433 802 aa19.03■□□□□ 0.64
VAMP1-205ENST00000535927 INPP5BP32019 993 aa19.03■□□□□ 0.64
VAMP1-205ENST00000535927 USP14P54578 494 aa19.03■□□□□ 0.64
VAMP1-205ENST00000535927 ICA1Q05084 483 aa19.03■□□□□ 0.64
VAMP1-205ENST00000535927 SEPT2Q15019 361 aa19.03■□□□□ 0.64
VAMP1-205ENST00000535927 RAB3GAP1Q15042 981 aa19.03■□□□□ 0.64
VAMP1-205ENST00000535927 RCSD1Q6JBY9 416 aa19.03■□□□□ 0.64
VAMP1-205ENST00000535927 Q6ZUG5 572 aa19.03■□□□□ 0.64
VAMP1-205ENST00000535927 SLC10A4Q96EP9 437 aa19.03■□□□□ 0.64
VAMP1-205ENST00000535927 CREBZFQ9NS37 354 aa19.03■□□□□ 0.64
VAMP1-205ENST00000535927 CCDC69A6NI79 296 aa19.02■□□□□ 0.64
VAMP1-205ENST00000535927 GDF11O95390 407 aa19.02■□□□□ 0.64
VAMP1-205ENST00000535927 GUCY1A2P33402 732 aa19.02■□□□□ 0.64
VAMP1-205ENST00000535927 VGLL4Q14135 290 aa19.02■□□□□ 0.64
VAMP1-205ENST00000535927 RRP1BQ14684 758 aaKnown RBP19.02■□□□□ 0.64
VAMP1-205ENST00000535927 CST9Q5W186 159 aa19.02■□□□□ 0.64
VAMP1-205ENST00000535927 KAT14Q9H8E8 782 aa19.02■□□□□ 0.64
VAMP1-205ENST00000535927 LY9Q9HBG7 655 aa19.02■□□□□ 0.64
VAMP1-205ENST00000535927 STX8Q9UNK0 236 aa19.02■□□□□ 0.64
VAMP1-205ENST00000535927 LIMCH1Q9UPQ0 1083 aa19.02■□□□□ 0.64
VAMP1-205ENST00000535927 TMX2Q9Y320 296 aa19.02■□□□□ 0.64
VAMP1-205ENST00000535927 SPDYE5A6NIY4 337 aa19.01■□□□□ 0.63
VAMP1-205ENST00000535927 TMEM88BA6NKF7 163 aa19.01■□□□□ 0.63
VAMP1-205ENST00000535927 CXCL11O14625 94 aa19.01■□□□□ 0.63
VAMP1-205ENST00000535927 CATIPQ7Z7H3 387 aa19.01■□□□□ 0.63
VAMP1-205ENST00000535927 ZNF280CQ8ND82 737 aa19.01■□□□□ 0.63
VAMP1-205ENST00000535927 GMCL1P1Q8NEA9 526 aa19.01■□□□□ 0.63
VAMP1-205ENST00000535927 ZKSCAN4Q969J2 545 aaPredicted RBP19.01■□□□□ 0.63
VAMP1-205ENST00000535927 KIAA1683Q9H0B3 1180 aa19.01■□□□□ 0.63
VAMP1-205ENST00000535927 ZNF408Q9H9D4 720 aa19.01■□□□□ 0.63
VAMP1-205ENST00000535927 GOPCQ9HD26 462 aa19.01■□□□□ 0.63
VAMP1-205ENST00000535927 SH2B1Q9NRF2 756 aaPredicted RBP19.01■□□□□ 0.63
VAMP1-205ENST00000535927 SLC12A7Q9Y666 1083 aa19.01■□□□□ 0.63
VAMP1-205ENST00000535927 MYH4Q9Y623 1939 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 CCDC196A0A1B0GTZ2 297 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 USP17L10C9JJH3 530 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 DDAH1O94760 285 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 EEF2P13639 858 aaKnown RBP19■□□□□ 0.63
VAMP1-205ENST00000535927 PPIL2Q13356 520 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 PRKG1Q13976 671 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 NFXL1Q6ZNB6 911 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 LPAR1Q92633 364 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 TMEM47Q9BQJ4 181 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 CLIP2Q9UDT6 1046 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 SNCAIPQ9Y6H5 919 aa19■□□□□ 0.63
VAMP1-205ENST00000535927 UBE2Q2LH0YL09 131 aa18.99■□□□□ 0.63
VAMP1-205ENST00000535927 DHX16O60231 1041 aaKnown RBP18.99■□□□□ 0.63
VAMP1-205ENST00000535927 ZBTB48P10074 688 aaPredicted RBP18.99■□□□□ 0.63
VAMP1-205ENST00000535927 GNAQP50148 359 aa18.99■□□□□ 0.63
VAMP1-205ENST00000535927 AK2P54819 239 aa18.99■□□□□ 0.63
VAMP1-205ENST00000535927 TOB2Q14106 344 aaPredicted RBP18.99■□□□□ 0.63
VAMP1-205ENST00000535927 DLK2Q6UY11 383 aa18.99■□□□□ 0.63
VAMP1-205ENST00000535927 CHST3Q7LGC8 479 aa18.99■□□□□ 0.63
VAMP1-205ENST00000535927 BRF1Q92994 677 aa18.99■□□□□ 0.63
VAMP1-205ENST00000535927 ZKSCAN3Q9BRR0 538 aa18.99■□□□□ 0.63
VAMP1-205ENST00000535927 AFG3L2Q9Y4W6 797 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms