RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 LONRF3Q496Y0 759 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 RCSD1Q6JBY9 416 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 SRBD1Q8N5C6 995 aaKnown RBP15.37■□□□□ 0.05
VPS33B-202ENST00000535906 CD209Q9NNX6 404 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
VPS33B-202ENST00000535906 KCNH3Q9ULD8 1083 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 XBP1P17861 261 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 ATP2B1P20020 1258 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 PTPREP23469 700 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 NLRP12P59046 1061 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 EARS2Q5JPH6 523 aaKnown RBP15.37■□□□□ 0.05
VPS33B-202ENST00000535906 ISM2Q6H9L7 571 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 DYNLL2Q96FJ2 89 aa15.37■□□□□ 0.05
VPS33B-202ENST00000535906 RBM17Q96I25 401 aaKnown RBP15.37■□□□□ 0.05
VPS33B-202ENST00000535906 PNOCQ13519 176 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 CCDC144BQ3MJ40 725 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 CTCFLQ8NI51 663 aaPredicted RBP15.36■□□□□ 0.05
VPS33B-202ENST00000535906 TUBE1Q9UJT0 475 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 CNTNAP5Q8WYK1 1306 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 PPP4CP60510 307 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 GSTO1P78417 241 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 TFAP4Q01664 338 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 METTL16Q86W50 562 aaKnown RBP15.36■□□□□ 0.05
VPS33B-202ENST00000535906 PROM2Q8N271 834 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 TGFBRAP1Q8WUH2 860 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 BPIFA3Q9BQP9 254 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 IL17RBQ9NRM6 502 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 GGA1Q9UJY5 639 aa15.36■□□□□ 0.05
VPS33B-202ENST00000535906 POLRMTO00411 1230 aaKnown RBP15.35■□□□□ 0.05
VPS33B-202ENST00000535906 IGSF3O75054 1194 aa15.35■□□□□ 0.05
VPS33B-202ENST00000535906 BAG3O95817 575 aa15.35■□□□□ 0.05
VPS33B-202ENST00000535906 ATP2B4P23634 1241 aa15.35■□□□□ 0.05
VPS33B-202ENST00000535906 NPY5RQ15761 445 aa15.35■□□□□ 0.05
VPS33B-202ENST00000535906 KRT27Q7Z3Y8 459 aa15.35■□□□□ 0.05
VPS33B-202ENST00000535906 CACTINQ8WUQ7 758 aaKnown RBP15.35■□□□□ 0.05
VPS33B-202ENST00000535906 POLLQ9UGP5 575 aa15.35■□□□□ 0.05
VPS33B-202ENST00000535906 IL1R1P14778 569 aa15.35■□□□□ 0.05
VPS33B-202ENST00000535906 KRT2P35908 639 aa15.35■□□□□ 0.05
VPS33B-202ENST00000535906 KRBA2Q6ZNG9 492 aa15.35■□□□□ 0.05
VPS33B-202ENST00000535906 FOXP4Q8IVH2 680 aaPredicted RBP15.35■□□□□ 0.05
VPS33B-202ENST00000535906 RTFDC1Q9BY42 306 aaPredicted RBP15.35■□□□□ 0.05
VPS33B-202ENST00000535906 BRWD3Q6RI45 1802 aa15.35■□□□□ 0.05
VPS33B-202ENST00000535906 BBOX1O75936 387 aa15.34■□□□□ 0.05
VPS33B-202ENST00000535906 VEGFAP15692 232 aaPredicted RBP15.34■□□□□ 0.05
VPS33B-202ENST00000535906 HOXA10P31260 410 aaPredicted RBP15.34■□□□□ 0.05
VPS33B-202ENST00000535906 PLCD1P51178 756 aa15.34■□□□□ 0.05
VPS33B-202ENST00000535906 NOM1Q5C9Z4 860 aaKnown RBP15.34■□□□□ 0.05
VPS33B-202ENST00000535906 CNNM3Q8NE01 707 aa15.34■□□□□ 0.05
VPS33B-202ENST00000535906 SRPRBQ9Y5M8 271 aaKnown RBP15.34■□□□□ 0.05
VPS33B-202ENST00000535906 FOXN1O15353 648 aa15.34■□□□□ 0.05
VPS33B-202ENST00000535906 NEMFO60524 1076 aa15.34■□□□□ 0.05
VPS33B-202ENST00000535906 WNT7AO00755 349 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 LDHCP07864 332 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 NCAPHQ15003 741 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 MAPKAPK5Q8IW41 473 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 LRRC8AQ8IWT6 810 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 SLC44A5Q8NCS7 719 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 TBC1D16Q8TBP0 767 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 NOL10Q9BSC4 688 aaKnown RBP15.33■□□□□ 0.04
VPS33B-202ENST00000535906 MKNK2Q9HBH9 465 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 PODXL2Q9NZ53 605 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 CEP131Q9UPN4 1083 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 ROBO3Q96MS0 1386 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 BTDP43251 543 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 MDM2Q00987 491 aaPredicted RBP15.33■□□□□ 0.04
VPS33B-202ENST00000535906 TXNRD1Q16881 649 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 USP49Q70CQ1 688 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 DGKHQ86XP1 1220 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 ZNF579Q8NAF0 562 aaKnown RBP15.33■□□□□ 0.04
VPS33B-202ENST00000535906 TNFRSF25Q93038 417 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 KAT14Q9H8E8 782 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 SAP30BPQ9UHR5 308 aaKnown RBP15.33■□□□□ 0.04
VPS33B-202ENST00000535906 PCDHA5Q9Y5H7 936 aa15.33■□□□□ 0.04
VPS33B-202ENST00000535906 KLRG2A4D1S0 409 aaPredicted RBP15.32■□□□□ 0.04
VPS33B-202ENST00000535906 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 TRIM75PA6NK02 468 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 POLR2DO15514 142 aaKnown RBP15.32■□□□□ 0.04
VPS33B-202ENST00000535906 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 CSRNP2Q9H175 543 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 NAV1Q8NEY1 1877 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 CDK5RAP2Q96SN8 1893 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 SCG2P13521 617 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 ARID5BQ14865 1188 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 MFSD14BQ5SR56 506 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 PNMA1Q8ND90 353 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 CRAMP1Q96RY5 1269 aa15.32■□□□□ 0.04
VPS33B-202ENST00000535906 GPR75-ASB3A0A0A6YYF3 556 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 C6orf229H3BNL8 230 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 RIOK3O14730 519 aaKnown RBP15.31■□□□□ 0.04
VPS33B-202ENST00000535906 ADAMTS3O15072 1205 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 PFKFB3Q16875 520 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-202ENST00000535906 AMOTL1Q8IY63 956 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 STAG2Q8N3U4 1231 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 KIF5BP33176 963 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 ELOA2Q8IYF1 753 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-202ENST00000535906 PDILTQ8N807 584 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 ANKS1AQ92625 1134 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms