RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 MFSD14CQ5VZR4 134 aa15.98■□□□□ 0.15
CLSTN3-205ENST00000535452 ANTXR1Q9H6X2 564 aa15.98■□□□□ 0.15
CLSTN3-205ENST00000535452 DNAJC18Q9H819 358 aa15.98■□□□□ 0.15
CLSTN3-205ENST00000535452 ARHGEF10LQ9HCE6 1279 aa15.98■□□□□ 0.15
CLSTN3-205ENST00000535452 SLC5A4Q9NY91 659 aa15.98■□□□□ 0.15
CLSTN3-205ENST00000535452 RCAN3Q9UKA8 241 aa15.98■□□□□ 0.15
CLSTN3-205ENST00000535452 RABGAP1Q9Y3P9 1069 aa15.98■□□□□ 0.15
CLSTN3-205ENST00000535452 NDUFB9Q9Y6M9 179 aa15.98■□□□□ 0.15
CLSTN3-205ENST00000535452 ZNF532Q9HCE3 1301 aa15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 PHIPQ8WWQ0 1821 aa15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 PRKAR2AP13861 404 aaKnown RBP15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 LRRFIP1Q32MZ4 808 aaKnown RBP15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 PAWRQ96IZ0 340 aaKnown RBP15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 C12orf42Q96LP6 360 aa15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 APBA2Q99767 749 aa15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 TANGO6Q9C0B7 1094 aa15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 KIAA1683Q9H0B3 1180 aa15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 EMILIN3Q9NT22 766 aa15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 PAG1Q9NWQ8 432 aa15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 ZBTB47Q9UFB7 747 aaPredicted RBP15.97■□□□□ 0.15
CLSTN3-205ENST00000535452 TMEM179Q6ZVK1 233 aa15.96■□□□□ 0.15
CLSTN3-205ENST00000535452 GPR142Q7Z601 462 aa15.96■□□□□ 0.15
CLSTN3-205ENST00000535452 LRRCC1Q9C099 1032 aa15.96■□□□□ 0.15
CLSTN3-205ENST00000535452 C11orf49Q9H6J7 331 aa15.96■□□□□ 0.15
CLSTN3-205ENST00000535452 ATP8A2Q9NTI2 1148 aa15.96■□□□□ 0.15
CLSTN3-205ENST00000535452 HOXC10Q9NYD6 342 aa15.96■□□□□ 0.15
CLSTN3-205ENST00000535452 ATP2B2Q01814 1243 aa15.95■□□□□ 0.14
CLSTN3-205ENST00000535452 EDC3Q96F86 508 aaKnown RBP15.95■□□□□ 0.14
CLSTN3-205ENST00000535452 CRISPLD2Q9H0B8 497 aa15.95■□□□□ 0.14
CLSTN3-205ENST00000535452 BOLA2Q9H3K6 86 aa15.95■□□□□ 0.14
CLSTN3-205ENST00000535452 RPAP3Q9H6T3 665 aaPredicted RBP15.95■□□□□ 0.14
CLSTN3-205ENST00000535452 GJD2Q9UKL4 321 aa15.95■□□□□ 0.14
CLSTN3-205ENST00000535452 A0A1W2PPC1 479 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 MSCO60682 206 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 VCAM1P19320 739 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 MAP2K5Q13163 448 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 CATSPERGQ6ZRH7 1159 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 DPP9Q86TI2 863 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 TRIB2Q92519 343 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 LPAR1Q92633 364 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 CCDC17Q96LX7 622 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 RIOK1Q9BRS2 568 aaKnown RBP15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 ZBTB40Q9NUA8 1239 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 RBPJLQ9UBG7 517 aa15.94■□□□□ 0.14
CLSTN3-205ENST00000535452 SLC15A5A6NIM6 579 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 MBD4O95243 580 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 ATP5JP18859 108 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 CNGA1P29973 690 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 FXR1P51114 621 aaKnown RBP eCLIP15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 PLCD1P51178 756 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 COG2Q14746 738 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 UBE2Q1Q7Z7E8 422 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 C7orf61Q8IZ16 206 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 MB21D1Q8N884 522 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 SDR42E1Q8WUS8 393 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 TXNRD2Q9NNW7 524 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 MYH1P12882 1939 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 FOCADQ5VW36 1801 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 HTTP42858 3142 aa15.93■□□□□ 0.14
CLSTN3-205ENST00000535452 RAD21O60216 631 aa15.92■□□□□ 0.14
CLSTN3-205ENST00000535452 SHMT1P34896 483 aa15.92■□□□□ 0.14
CLSTN3-205ENST00000535452 ICA1Q05084 483 aa15.92■□□□□ 0.14
CLSTN3-205ENST00000535452 PLS1Q14651 629 aa15.92■□□□□ 0.14
CLSTN3-205ENST00000535452 SEPT2Q15019 361 aa15.92■□□□□ 0.14
CLSTN3-205ENST00000535452 ARMT1Q9H993 441 aa15.92■□□□□ 0.14
CLSTN3-205ENST00000535452 ZNF287Q9HBT7 754 aa15.92■□□□□ 0.14
CLSTN3-205ENST00000535452 DCP1AQ9NPI6 582 aaPredicted RBP15.92■□□□□ 0.14
CLSTN3-205ENST00000535452 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
CLSTN3-205ENST00000535452 PRKAG2Q9UGJ0 569 aa15.92■□□□□ 0.14
CLSTN3-205ENST00000535452 STRNO43815 780 aa15.91■□□□□ 0.14
CLSTN3-205ENST00000535452 JAG1P78504 1218 aa15.91■□□□□ 0.14
CLSTN3-205ENST00000535452 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
CLSTN3-205ENST00000535452 LCORLQ8N3X6 602 aa15.91■□□□□ 0.14
CLSTN3-205ENST00000535452 HAUS7Q99871 368 aa15.91■□□□□ 0.14
CLSTN3-205ENST00000535452 PORCNQ9H237 461 aa15.91■□□□□ 0.14
CLSTN3-205ENST00000535452 GOPCQ9HD26 462 aa15.91■□□□□ 0.14
CLSTN3-205ENST00000535452 CTDP1Q9Y5B0 961 aaPredicted RBP15.91■□□□□ 0.14
CLSTN3-205ENST00000535452 SLC4A4Q9Y6R1 1079 aa15.91■□□□□ 0.14
CLSTN3-205ENST00000535452 FLOT1O75955 427 aa15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 PTPREP23469 700 aa15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 ADD2P35612 726 aa15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 UBE3CQ15386 1083 aa15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 SHROOM1Q2M3G4 852 aaPredicted RBP15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 Q3C1V9 767 aa15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 LBX2Q6XYB7 198 aa15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 ACER1Q8TDN7 264 aa15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 ECHDC1Q9NTX5 307 aa15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 OGDHLQ9ULD0 1010 aa15.9■□□□□ 0.14
CLSTN3-205ENST00000535452 CACNB2Q08289 660 aaPredicted RBP15.89■□□□□ 0.13
CLSTN3-205ENST00000535452 MORN1Q5T089 497 aa15.89■□□□□ 0.13
CLSTN3-205ENST00000535452 MROH8Q9H579 483 aa15.89■□□□□ 0.13
CLSTN3-205ENST00000535452 MKNK2Q9HBH9 465 aa15.89■□□□□ 0.13
CLSTN3-205ENST00000535452 NAV1Q8NEY1 1877 aa15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 CDK5RAP2Q96SN8 1893 aa15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 CENPFP49454 3210 aa15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 SPDYE16A6NNV3 312 aaPredicted RBP15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 WDR46O15213 610 aaKnown RBP15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 APPP05067 770 aa15.88■□□□□ 0.13
CLSTN3-205ENST00000535452 COPB2P35606 906 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms