RNA–Protein interactions for RNA: ENST00000535047.5

PPFIBP1-204, Transcript of PPFIA binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PPFIBP1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-204ENST00000535047 HTTP42858 3142 aa16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 CCDC85CA6NKD9 419 aa16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 C19orf81C9J6K1 198 aa16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 AKR1B1P15121 316 aa16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 GUCY1A2P33402 732 aa16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 CDK8P49336 464 aa16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 CAP1Q01518 475 aa16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 SBK1Q52WX2 424 aa16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 FBXO46Q6PJ61 603 aaPredicted RBP16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 TMEM179Q6ZVK1 233 aa16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 STK11IPQ8N1F8 1099 aa16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 GREB1LQ9C091 1923 aaPredicted RBP16.98■□□□□ 0.31
PPFIBP1-204ENST00000535047 A0A0D9SFI3 127 aa16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 PATL2C9JE40 543 aaKnown RBP16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 OSBPP22059 807 aa16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 IRX3P78415 501 aaPredicted RBP16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 ARHGEF6Q15052 776 aa16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 USP17L2Q6R6M4 530 aa16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 IFNL3Q8IZI9 196 aa16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 ACER1Q8TDN7 264 aa16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 FAM227BQ96M60 508 aa16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 ARHGAP39Q9C0H5 1083 aa16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 NAPBQ9H115 298 aa16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 HPS5Q9UPZ3 1129 aa16.97■□□□□ 0.31
PPFIBP1-204ENST00000535047 BCRP11274 1271 aa16.96■□□□□ 0.31
PPFIBP1-204ENST00000535047 PDE4AP27815 886 aa16.96■□□□□ 0.31
PPFIBP1-204ENST00000535047 USP14P54578 494 aa16.96■□□□□ 0.31
PPFIBP1-204ENST00000535047 NMIQ13287 307 aaPredicted RBP16.96■□□□□ 0.31
PPFIBP1-204ENST00000535047 CLEC10AQ8IUN9 316 aa16.96■□□□□ 0.31
PPFIBP1-204ENST00000535047 CCDC17Q96LX7 622 aa16.96■□□□□ 0.31
PPFIBP1-204ENST00000535047 ASCC2Q9H1I8 757 aaPredicted RBP16.96■□□□□ 0.31
PPFIBP1-204ENST00000535047 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
PPFIBP1-204ENST00000535047 HELLSQ9NRZ9 838 aa16.96■□□□□ 0.31
PPFIBP1-204ENST00000535047 ICA1Q05084 483 aa16.95■□□□□ 0.3
PPFIBP1-204ENST00000535047 TICAM2Q86XR7 235 aa16.95■□□□□ 0.3
PPFIBP1-204ENST00000535047 ANKRD13CQ8N6S4 541 aa16.95■□□□□ 0.3
PPFIBP1-204ENST00000535047 KIAA1683Q9H0B3 1180 aa16.95■□□□□ 0.3
PPFIBP1-204ENST00000535047 EMILIN3Q9NT22 766 aa16.95■□□□□ 0.3
PPFIBP1-204ENST00000535047 PSMC4P43686 418 aa16.94■□□□□ 0.3
PPFIBP1-204ENST00000535047 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
PPFIBP1-204ENST00000535047 VPS53Q5VIR6 699 aa16.94■□□□□ 0.3
PPFIBP1-204ENST00000535047 C12orf42Q96LP6 360 aa16.94■□□□□ 0.3
PPFIBP1-204ENST00000535047 MKNK2Q9HBH9 465 aa16.94■□□□□ 0.3
PPFIBP1-204ENST00000535047 ARHGEF10LQ9HCE6 1279 aa16.94■□□□□ 0.3
PPFIBP1-204ENST00000535047 DIAPH3Q9NSV4 1193 aa16.94■□□□□ 0.3
PPFIBP1-204ENST00000535047 PTPN22Q9Y2R2 807 aa16.94■□□□□ 0.3
PPFIBP1-204ENST00000535047 FOXP2O15409 715 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 FMNL1O95466 1100 aaPredicted RBP16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 VCAM1P19320 739 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 SDSP20132 328 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 CTGFP29279 349 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 HOXA7P31268 230 aaPredicted RBP16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 GCLCP48506 637 aaPredicted RBP16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 FCGRTP55899 365 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 PPARAQ07869 468 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 FAM110CQ1W6H9 321 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 TRIM47Q96LD4 638 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 SH2D4AQ9H788 454 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 ZNF287Q9HBT7 754 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 MYH4Q9Y623 1939 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
PPFIBP1-204ENST00000535047 LAMA4Q16363 1823 aa16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 A0A1W2PRG0 241 aa16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 PRDM1O75626 825 aa16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 GNRH1P01148 92 aa16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 SLC3A2P08195 630 aaKnown RBP16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 RASA1P20936 1047 aa16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 HERVK_113P62684 666 aa16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 ATP2B2Q01814 1243 aa16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 TTC22Q5TAA0 569 aa16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 ZNF589Q86UQ0 364 aaPredicted RBP16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 PTCH2Q9Y6C5 1203 aa16.92■□□□□ 0.3
PPFIBP1-204ENST00000535047 HIP1O00291 1037 aa16.91■□□□□ 0.3
PPFIBP1-204ENST00000535047 GSPT1P15170 499 aaKnown RBP16.91■□□□□ 0.3
PPFIBP1-204ENST00000535047 RPAP3Q9H6T3 665 aaPredicted RBP16.91■□□□□ 0.3
PPFIBP1-204ENST00000535047 CENPFP49454 3210 aa16.91■□□□□ 0.3
PPFIBP1-204ENST00000535047 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 MFAP1P55081 439 aaKnown RBP16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 PDE4BQ07343 736 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 CWC27Q6UX04 472 aaKnown RBP16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 P2RX7Q99572 595 aaKnown RBP16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 TANGO6Q9C0B7 1094 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 KANSL2Q9H9L4 492 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 PARP14Q460N5 1801 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 MYPNQ86TC9 1320 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 A0A0G2JMZ2 1700 aa16.9■□□□□ 0.3
PPFIBP1-204ENST00000535047 TNPO2O14787 897 aaKnown RBP16.89■□□□□ 0.29
PPFIBP1-204ENST00000535047 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.29
PPFIBP1-204ENST00000535047 EEF2P13639 858 aaKnown RBP16.89■□□□□ 0.29
PPFIBP1-204ENST00000535047 HOXD10P28358 340 aa16.89■□□□□ 0.29
PPFIBP1-204ENST00000535047 PRMT2P55345 433 aa16.89■□□□□ 0.29
PPFIBP1-204ENST00000535047 SLC9C1Q4G0N8 1177 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms