RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PPP1R9BQ96SB3 815 aa14.42□□□□□ -0.1
SCARB1-204ENST00000535005 PDRG1Q9NUG6 133 aa14.42□□□□□ -0.1
SCARB1-204ENST00000535005 TRAF5O00463 557 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 ZNF784Q8NCA9 323 aaPredicted RBP14.41□□□□□ -0.1
SCARB1-204ENST00000535005 ZSCAN10Q96SZ4 725 aaPredicted RBP14.41□□□□□ -0.1
SCARB1-204ENST00000535005 GOLGA6L22H0YM25 854 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 TOMM70O94826 608 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 JAG1P78504 1218 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 SART3Q15020 963 aaKnown RBP14.41□□□□□ -0.1
SCARB1-204ENST00000535005 SEC23AQ15436 765 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 HS1BP3Q53T59 392 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 PPP4R3BQ5MIZ7 849 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 CHST3Q7LGC8 479 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 DGKHQ86XP1 1220 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.41□□□□□ -0.1
SCARB1-204ENST00000535005 RBM46Q8TBY0 533 aaKnown RBP14.41□□□□□ -0.1
SCARB1-204ENST00000535005 UBAC1Q9BSL1 405 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 GZF1Q9H116 711 aaPredicted RBP14.41□□□□□ -0.1
SCARB1-204ENST00000535005 CABP5Q9NP86 173 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 IL17RBQ9NRM6 502 aa14.41□□□□□ -0.1
SCARB1-204ENST00000535005 UNCXA6NJT0 531 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 SH2B2O14492 632 aaPredicted RBP14.4□□□□□ -0.1
SCARB1-204ENST00000535005 IFIT3O14879 490 aaKnown RBP14.4□□□□□ -0.1
SCARB1-204ENST00000535005 GDF11O95390 407 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 GH2P01242 217 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 ASNSP08243 561 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 GUCY1A2P33402 732 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 LIFRP42702 1097 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 FKBP1BP68106 108 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 NOL9Q5SY16 702 aaKnown RBP14.4□□□□□ -0.1
SCARB1-204ENST00000535005 Q6ZUG5 572 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 SMC1BQ8NDV3 1235 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 WRNIP1Q96S55 665 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 KANSL2Q9H9L4 492 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 MTMR4Q9NYA4 1195 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 ZBTB21Q9ULJ3 1066 aa14.4□□□□□ -0.1
SCARB1-204ENST00000535005 GREB1LQ9C091 1923 aaPredicted RBP14.4□□□□□ -0.1
SCARB1-204ENST00000535005 TNKSO95271 1327 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 ST18O60284 1047 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 INPP5BP32019 993 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 IREB2P48200 963 aaKnown RBP14.39□□□□□ -0.11
SCARB1-204ENST00000535005 MAP3K9P80192 1104 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 ANKRD1Q15327 319 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 RCSD1Q6JBY9 416 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 ARMC9Q7Z3E5 817 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 TMTC2Q8N394 836 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 ANP32BQ92688 251 aaKnown RBP14.39□□□□□ -0.11
SCARB1-204ENST00000535005 TCEANC2Q96MN5 208 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 ZKSCAN3Q9BRR0 538 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 ANGEL1Q9UNK9 670 aaKnown RBP14.39□□□□□ -0.11
SCARB1-204ENST00000535005 MYH8P13535 1937 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 PASKQ96RG2 1323 aa14.39□□□□□ -0.11
SCARB1-204ENST00000535005 ERICH2A1L162 156 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 MPHOSPH10O00566 681 aaKnown RBP14.38□□□□□ -0.11
SCARB1-204ENST00000535005 EVCP57679 992 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 FMR1Q06787 632 aaKnown RBP eCLIP14.38□□□□□ -0.11
SCARB1-204ENST00000535005 TOB2Q14106 344 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-204ENST00000535005 TMEM67Q5HYA8 995 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 LDLRAD1Q5T700 205 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 SGMS1Q86VZ5 419 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 SCYL3Q8IZE3 742 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 ENAHQ8N8S7 591 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-204ENST00000535005 TNPO1Q92973 898 aaKnown RBP14.38□□□□□ -0.11
SCARB1-204ENST00000535005 CEP95Q96GE4 821 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 PDCL3Q9H2J4 239 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 LY9Q9HBG7 655 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 NYAP2Q9P242 653 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 NMT2O60551 498 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 MCM2P49736 904 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 AK2P54819 239 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 WTAPQ15007 396 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 SEPT2Q15019 361 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 SHROOM1Q2M3G4 852 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-204ENST00000535005 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-204ENST00000535005 MKL1Q969V6 931 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 MAP7D2Q96T17 732 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 LRRC2Q9BYS8 371 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 GPHNQ9NQX3 736 aaPredicted RBP14.38□□□□□ -0.11
SCARB1-204ENST00000535005 FZD1Q9UP38 647 aa14.38□□□□□ -0.11
SCARB1-204ENST00000535005 FSTL1Q12841 308 aa14.37□□□□□ -0.11
SCARB1-204ENST00000535005 PRKG1Q13976 671 aa14.37□□□□□ -0.11
SCARB1-204ENST00000535005 SIAH1Q8IUQ4 282 aa14.37□□□□□ -0.11
SCARB1-204ENST00000535005 ANKRD13AQ8IZ07 590 aa14.37□□□□□ -0.11
SCARB1-204ENST00000535005 BRF1Q92994 677 aa14.37□□□□□ -0.11
SCARB1-204ENST00000535005 ZKSCAN4Q969J2 545 aaPredicted RBP14.37□□□□□ -0.11
SCARB1-204ENST00000535005 GBA2Q9HCG7 927 aaPredicted RBP14.37□□□□□ -0.11
SCARB1-204ENST00000535005 SYNPO2Q9UMS6 1093 aa14.37□□□□□ -0.11
SCARB1-204ENST00000535005 PAPPA2Q9BXP8 1791 aa14.37□□□□□ -0.11
SCARB1-204ENST00000535005 CELF2O95319 508 aaKnown RBP14.36□□□□□ -0.11
SCARB1-204ENST00000535005 TTLL1O95922 423 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 TOP1P11387 765 aaKnown RBP14.36□□□□□ -0.11
SCARB1-204ENST00000535005 FGD1P98174 961 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 CST9Q5W186 159 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.36□□□□□ -0.11
SCARB1-204ENST00000535005 C2orf69Q8N8R5 385 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 ICA1Q05084 483 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 TTLL12Q14166 644 aaPredicted RBP14.36□□□□□ -0.11
SCARB1-204ENST00000535005 IFIT1BQ5T764 474 aaKnown RBP14.36□□□□□ -0.11
SCARB1-204ENST00000535005 ZSCAN30Q86W11 494 aa14.36□□□□□ -0.11
SCARB1-204ENST00000535005 TMEM47Q9BQJ4 181 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms