RNA–Protein interactions for RNA: ENST00000534946.5

LMO3-211, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-211ENST00000534946 PRRT2Q7Z6L0 340 aaPredicted RBP13.88□□□□□ -0.19
LMO3-211ENST00000534946 SKAP1Q86WV1 359 aa13.88□□□□□ -0.19
LMO3-211ENST00000534946 PROCA1Q8NCQ7 364 aaPredicted RBP13.88□□□□□ -0.19
LMO3-211ENST00000534946 FEZ1Q99689 392 aa13.88□□□□□ -0.19
LMO3-211ENST00000534946 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
LMO3-211ENST00000534946 ARHGEF10LQ9HCE6 1279 aa13.88□□□□□ -0.19
LMO3-211ENST00000534946 WBP1LQ9NX94 342 aa13.88□□□□□ -0.19
LMO3-211ENST00000534946 AFG3L2Q9Y4W6 797 aa13.88□□□□□ -0.19
LMO3-211ENST00000534946 TRIM75PA6NK02 468 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 C19orf81C9J6K1 198 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 ZNF213O14771 459 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 ORC4O43929 436 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 SLURP2P0DP57 97 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 ICA1Q05084 483 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 PABPC4Q13310 644 aaKnown RBP eCLIP13.87□□□□□ -0.19
LMO3-211ENST00000534946 RRP1BQ14684 758 aaKnown RBP13.87□□□□□ -0.19
LMO3-211ENST00000534946 RAB3GAP1Q15042 981 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 IFNL1Q8IU54 200 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 ZNF444Q8N0Y2 327 aaPredicted RBP13.87□□□□□ -0.19
LMO3-211ENST00000534946 STAG1Q8WVM7 1258 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 CFHR5Q9BXR6 569 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 SYNPO2Q9UMS6 1093 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 SLC45A1Q9Y2W3 748 aa13.87□□□□□ -0.19
LMO3-211ENST00000534946 GREB1LQ9C091 1923 aaPredicted RBP13.87□□□□□ -0.19
LMO3-211ENST00000534946 USP17L10C9JJH3 530 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 STK25O00506 426 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 RASA1P20936 1047 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 SH3D19Q5HYK7 790 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 ANKRD23Q86SG2 305 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 BRI3BPQ8WY22 251 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 CNNM2Q9H8M5 875 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 KANSL2Q9H9L4 492 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 TMOD4Q9NZQ9 345 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 PNMA3Q9UL41 463 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
LMO3-211ENST00000534946 PTPRFP10586 1907 aa13.86□□□□□ -0.19
LMO3-211ENST00000534946 TSPY2A6NKD2 308 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 REC8O95072 547 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 FGRP09769 529 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 TSPY3P0CV98 308 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 TSPY8P0CW00 308 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 HSPA1AP0DMV8 641 aaKnown RBP13.85□□□□□ -0.19
LMO3-211ENST00000534946 HSPA1BP0DMV9 641 aaKnown RBP13.85□□□□□ -0.19
LMO3-211ENST00000534946 AKR1B1P15121 316 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 BACE1P56817 501 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 EVX2Q03828 476 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 SPP2Q13103 211 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 MTMR2Q13614 643 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 SEPT2Q15019 361 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 AKNAD1Q5T1N1 836 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 MFSD6Q6ZSS7 791 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 ESR2Q92731 530 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 C12orf42Q96LP6 360 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 PARK7Q99497 189 aaKnown RBP13.85□□□□□ -0.19
LMO3-211ENST00000534946 KIAA1683Q9H0B3 1180 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 AGTPBP1Q9UPW5 1226 aa13.85□□□□□ -0.19
LMO3-211ENST00000534946 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
LMO3-211ENST00000534946 CTCFP49711 727 aaPredicted RBP13.84□□□□□ -0.19
LMO3-211ENST00000534946 CTDSPL2Q05D32 466 aa13.84□□□□□ -0.19
LMO3-211ENST00000534946 NOM1Q5C9Z4 860 aaKnown RBP13.84□□□□□ -0.19
LMO3-211ENST00000534946 RNF20Q5VTR2 975 aa13.84□□□□□ -0.19
LMO3-211ENST00000534946 USP17L2Q6R6M4 530 aa13.84□□□□□ -0.19
LMO3-211ENST00000534946 GADL1Q6ZQY3 521 aa13.84□□□□□ -0.19
LMO3-211ENST00000534946 LPAR1Q92633 364 aa13.84□□□□□ -0.19
LMO3-211ENST00000534946 MAP4K1Q92918 833 aa13.84□□□□□ -0.19
LMO3-211ENST00000534946 ZIC5Q96T25 663 aa13.84□□□□□ -0.19
LMO3-211ENST00000534946 IL25Q9H293 177 aa13.84□□□□□ -0.19
LMO3-211ENST00000534946 TOMM22Q9NS69 142 aa13.84□□□□□ -0.19
LMO3-211ENST00000534946 IGF2BP3O00425 579 aaKnown RBP eCLIP13.83□□□□□ -0.2
LMO3-211ENST00000534946 PRDM1O75626 825 aa13.83□□□□□ -0.2
LMO3-211ENST00000534946 HMGCS2P54868 508 aa13.83□□□□□ -0.2
LMO3-211ENST00000534946 HAND2P61296 217 aa13.83□□□□□ -0.2
LMO3-211ENST00000534946 TRDNQ13061 729 aa13.83□□□□□ -0.2
LMO3-211ENST00000534946 TAF1CQ15572 869 aaPredicted RBP13.83□□□□□ -0.2
LMO3-211ENST00000534946 CCDC178Q5BJE1 867 aa13.83□□□□□ -0.2
LMO3-211ENST00000534946 NEDD1Q8NHV4 660 aa13.83□□□□□ -0.2
LMO3-211ENST00000534946 GTF3C2Q8WUA4 911 aaPredicted RBP13.83□□□□□ -0.2
LMO3-211ENST00000534946 KRT23Q9C075 422 aa13.83□□□□□ -0.2
LMO3-211ENST00000534946 GOPCQ9HD26 462 aa13.83□□□□□ -0.2
LMO3-211ENST00000534946 RNF186Q9NXI6 227 aa13.83□□□□□ -0.2
LMO3-211ENST00000534946 NYAP2Q9P242 653 aa13.83□□□□□ -0.2
LMO3-211ENST00000534946 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.83□□□□□ -0.2
LMO3-211ENST00000534946 BTBD19C9JJ37 291 aa13.82□□□□□ -0.2
LMO3-211ENST00000534946 RANBP6O60518 1105 aaKnown RBP13.82□□□□□ -0.2
LMO3-211ENST00000534946 TTLL1O95922 423 aa13.82□□□□□ -0.2
LMO3-211ENST00000534946 GUCY1A2P33402 732 aa13.82□□□□□ -0.2
LMO3-211ENST00000534946 JAG1P78504 1218 aa13.82□□□□□ -0.2
LMO3-211ENST00000534946 SHROOM1Q2M3G4 852 aaPredicted RBP13.82□□□□□ -0.2
LMO3-211ENST00000534946 CCDC84Q86UT8 332 aaPredicted RBP13.82□□□□□ -0.2
LMO3-211ENST00000534946 TBC1D10CQ8IV04 446 aa13.82□□□□□ -0.2
LMO3-211ENST00000534946 STK11IPQ8N1F8 1099 aa13.82□□□□□ -0.2
LMO3-211ENST00000534946 LSG1Q9H089 658 aaKnown RBP13.82□□□□□ -0.2
LMO3-211ENST00000534946 ZFYVE28Q9HCC9 887 aa13.82□□□□□ -0.2
LMO3-211ENST00000534946 TMX2Q9Y320 296 aa13.82□□□□□ -0.2
LMO3-211ENST00000534946 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
LMO3-211ENST00000534946 IGKV6D-41A0A0C4DH26 115 aa13.81□□□□□ -0.2
LMO3-211ENST00000534946 SMIM22K7EJ46 135 aa13.81□□□□□ -0.2
LMO3-211ENST00000534946 PDHXO00330 501 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms