RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ANO6Q4KMQ2 910 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 MCTP2Q6DN12 878 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 ZSCAN25Q6NSZ9 544 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 USP27XA6NNY8 438 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 EIF3CLB5ME19 914 aaKnown RBP10.33□□□□□ -0.76
SF3B2-216ENST00000534765 RANBP6O60518 1105 aaKnown RBP10.33□□□□□ -0.76
SF3B2-216ENST00000534765 SMC2O95347 1197 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 F13A1P00488 732 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 IVLP07476 585 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 ZFYP08048 801 aaPredicted RBP10.33□□□□□ -0.76
SF3B2-216ENST00000534765 VEGFAP15692 232 aaPredicted RBP10.33□□□□□ -0.76
SF3B2-216ENST00000534765 GUCY1A2P33402 732 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 TBC1D16Q8TBP0 767 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 EIF3CQ99613 913 aaKnown RBP10.33□□□□□ -0.76
SF3B2-216ENST00000534765 ZNF213O14771 459 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 PEX19P40855 299 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 ATP2B2Q01814 1243 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 MAP3K11Q16584 847 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 SMARCC2Q8TAQ2 1214 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 LY9Q9HBG7 655 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 ZNF446Q9NWS9 450 aa10.33□□□□□ -0.76
SF3B2-216ENST00000534765 PFKFB2O60825 505 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 CEBPZQ03701 1054 aaKnown RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 CREBRFQ8IUR6 639 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 GOLGA5Q8TBA6 731 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 TFIP11Q9UBB9 837 aaKnown RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 SNED1Q8TER0 1413 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 RGL2O15211 777 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 USP17L8P0C7I0 530 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 MAP2K1Q02750 393 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 TTF1Q15361 905 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 TDRD7Q8NHU6 1098 aaKnown RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 SH3RF3Q8TEJ3 882 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 CACTINQ8WUQ7 758 aaKnown RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 PHKBQ93100 1093 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 MKRN1Q9UHC7 482 aaKnown RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 RGPD3A6NKT7 1758 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 RGPD4Q7Z3J3 1758 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 KIF28PB7ZC32 967 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 KIF2AO00139 706 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 UFL1O94874 794 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 SCP2P22307 547 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 PSMA5P28066 241 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 SLC44A5Q8NCS7 719 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 JPH2Q9BR39 696 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-216ENST00000534765 DLEC1Q9Y238 1755 aa10.32□□□□□ -0.76
SF3B2-216ENST00000534765 PTPDC1A2A3K4 754 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 NF2P35240 595 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 MAP3K12Q12852 859 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 SHROOM1Q2M3G4 852 aaPredicted RBP10.31□□□□□ -0.76
SF3B2-216ENST00000534765 CEP57Q86XR8 500 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 DNAJC25Q9H1X3 360 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 ARFGAP3Q9NP61 516 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 CCDC69A6NI79 296 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 SH2B2O14492 632 aaPredicted RBP10.31□□□□□ -0.76
SF3B2-216ENST00000534765 HOXA10P31260 410 aaPredicted RBP10.31□□□□□ -0.76
SF3B2-216ENST00000534765 ZNF165P49910 485 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 EVCP57679 992 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 TTC6Q86TZ1 520 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 FBXO18Q8NFZ0 1043 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 CNKSR2Q8WXI2 1034 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 DYNLL2Q96FJ2 89 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 CARD6Q9BX69 1037 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.31□□□□□ -0.762e-15■■□□□ 11.8
SF3B2-216ENST00000534765 DONSONQ9NYP3 566 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 ATP6V1DQ9Y5K8 247 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 KLF18A0A0U1RQI7 1052 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 MAGEA9P43362 315 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 IMMTQ16891 758 aaKnown RBP10.31□□□□□ -0.76
SF3B2-216ENST00000534765 CD209Q9NNX6 404 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 IRAK4Q9NWZ3 460 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 CPSF2Q9P2I0 782 aaKnown RBP10.31□□□□□ -0.76
SF3B2-216ENST00000534765 FOCADQ5VW36 1801 aa10.31□□□□□ -0.76
SF3B2-216ENST00000534765 hCG_1642624A0A1W2PR95 340 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 MINDY4BA8MYZ0 360 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 PLCD1P51178 756 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 NTRK3Q16288 839 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 RRP12Q5JTH9 1297 aaKnown RBP10.3□□□□□ -0.76
SF3B2-216ENST00000534765 VPS37DQ86XT2 251 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 FAM200AQ8TCP9 573 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
SF3B2-216ENST00000534765 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.3□□□□□ -0.76
SF3B2-216ENST00000534765 SIPA1L1O43166 1804 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 NAV1Q8NEY1 1877 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 MAGEB6P1A0A0J9YX57 407 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 ACTN2P35609 894 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 RESTQ13127 1097 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 CAVIN4Q5BKX8 364 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 FAM47AQ5JRC9 791 aa10.3□□□□□ -0.76
SF3B2-216ENST00000534765 LARP1BQ659C4 914 aaKnown RBP10.3□□□□□ -0.76
SF3B2-216ENST00000534765 DCP1AQ9NPI6 582 aaPredicted RBP10.3□□□□□ -0.76
SF3B2-216ENST00000534765 PLA2G4AP47712 749 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 SH2B1Q9NRF2 756 aaPredicted RBP10.29□□□□□ -0.76
SF3B2-216ENST00000534765 XDHP47989 1333 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 USP17L12C9JPN9 530 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 USP17L21D6R901 530 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 AP5Z1O43299 807 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 UBE2HP62256 183 aa10.29□□□□□ -0.76
SF3B2-216ENST00000534765 TYRO3Q06418 890 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms