RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 USP17L13C9JLJ4 530 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 USP17L11C9JVI0 530 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 USP17L18D6R9N7 530 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 USP17L22D6RA61 530 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 USP17L17D6RBQ6 530 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 USP17L19D6RCP7 530 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 USP17L20D6RJB6 530 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 CYP2B6P20813 491 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 PLCD1P51178 756 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 USP17L24Q0WX57 530 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 TXNRD2Q9NNW7 524 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 HMX1Q9NP08 348 aaPredicted RBP22.33■■□□□ 1.17
CTSB-233ENST00000534636 PAG1Q9NWQ8 432 aa22.33■■□□□ 1.17
CTSB-233ENST00000534636 RPTORQ8N122 1335 aa22.32■■□□□ 1.16
CTSB-233ENST00000534636 RANBP2P49792 3224 aaKnown RBP22.32■■□□□ 1.16
CTSB-233ENST00000534636 MPHOSPH10O00566 681 aaKnown RBP22.32■■□□□ 1.16
CTSB-233ENST00000534636 SHMT1P34896 483 aa22.32■■□□□ 1.16
CTSB-233ENST00000534636 CCNA1P78396 465 aa22.32■■□□□ 1.16
CTSB-233ENST00000534636 TRMT44Q8IYL2 757 aaKnown RBP22.32■■□□□ 1.16
CTSB-233ENST00000534636 KIAA1683Q9H0B3 1180 aa22.32■■□□□ 1.16
CTSB-233ENST00000534636 VCAM1P19320 739 aa22.31■■□□□ 1.16
CTSB-233ENST00000534636 CHRDL2Q6WN34 429 aa22.31■■□□□ 1.16
CTSB-233ENST00000534636 AMOTL1Q8IY63 956 aa22.31■■□□□ 1.16
CTSB-233ENST00000534636 SDR42E1Q8WUS8 393 aa22.31■■□□□ 1.16
CTSB-233ENST00000534636 CRISPLD2Q9H0B8 497 aa22.31■■□□□ 1.16
CTSB-233ENST00000534636 BOLA2Q9H3K6 86 aa22.31■■□□□ 1.16
CTSB-233ENST00000534636 RBPJLQ9UBG7 517 aa22.31■■□□□ 1.16
CTSB-233ENST00000534636 BAZ2AQ9UIF9 1905 aaKnown RBP22.3■■□□□ 1.16
CTSB-233ENST00000534636 TCRBV5S4A2TA0A5A2 114 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 EVI5O60447 810 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 PEX10O60683 326 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 XRCC5P13010 732 aaKnown RBP22.3■■□□□ 1.16
CTSB-233ENST00000534636 ZKSCAN1P17029 563 aaPredicted RBP22.3■■□□□ 1.16
CTSB-233ENST00000534636 ATP5JP18859 108 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 GPR142Q7Z601 462 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 NECAB2Q7Z6G3 386 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 PLEKHH3Q7Z736 793 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 LCORLQ8N3X6 602 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 ANKLE1Q8NAG6 615 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 TRIB2Q92519 343 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 DDRGK1Q96HY6 314 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 LRRCC1Q9C099 1032 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 DCP1AQ9NPI6 582 aaPredicted RBP22.3■■□□□ 1.16
CTSB-233ENST00000534636 RABGAP1Q9Y3P9 1069 aa22.3■■□□□ 1.16
CTSB-233ENST00000534636 GLRX3O76003 335 aaKnown RBP22.29■■□□□ 1.16
CTSB-233ENST00000534636 RGS2P41220 211 aa22.29■■□□□ 1.16
CTSB-233ENST00000534636 GABPAQ06546 454 aa22.29■■□□□ 1.16
CTSB-233ENST00000534636 ACER1Q8TDN7 264 aa22.29■■□□□ 1.16
CTSB-233ENST00000534636 EDC3Q96F86 508 aaKnown RBP22.29■■□□□ 1.16
CTSB-233ENST00000534636 SWAP70Q9UH65 585 aa22.29■■□□□ 1.16
CTSB-233ENST00000534636 MBD4O95243 580 aa22.28■■□□□ 1.16
CTSB-233ENST00000534636 PRKAR2AP13861 404 aaKnown RBP22.28■■□□□ 1.16
CTSB-233ENST00000534636 ADD2P35612 726 aa22.28■■□□□ 1.16
CTSB-233ENST00000534636 FXR1P51114 621 aaKnown RBP eCLIP22.28■■□□□ 1.16
CTSB-233ENST00000534636 Q3C1V9 767 aa22.28■■□□□ 1.16
CTSB-233ENST00000534636 WDR78Q5VTH9 848 aa22.28■■□□□ 1.16
CTSB-233ENST00000534636 CATSPERGQ6ZRH7 1159 aa22.28■■□□□ 1.16
CTSB-233ENST00000534636 PAWRQ96IZ0 340 aaKnown RBP22.28■■□□□ 1.16
CTSB-233ENST00000534636 APBA2Q99767 749 aa22.28■■□□□ 1.16
CTSB-233ENST00000534636 HAUS7Q99871 368 aa22.28■■□□□ 1.16
CTSB-233ENST00000534636 PORCNQ9H237 461 aa22.28■■□□□ 1.16
CTSB-233ENST00000534636 ARMT1Q9H993 441 aa22.28■■□□□ 1.16
CTSB-233ENST00000534636 TRIM32Q13049 653 aa22.27■■□□□ 1.16
CTSB-233ENST00000534636 SEPT2Q15019 361 aa22.27■■□□□ 1.16
CTSB-233ENST00000534636 RPAP3Q9H6T3 665 aaPredicted RBP22.27■■□□□ 1.16
CTSB-233ENST00000534636 ATP8A2Q9NTI2 1148 aa22.27■■□□□ 1.16
CTSB-233ENST00000534636 ZSCAN25Q6NSZ9 544 aa22.26■■□□□ 1.15
CTSB-233ENST00000534636 TMEM179Q6ZVK1 233 aa22.26■■□□□ 1.15
CTSB-233ENST00000534636 IVNS1ABPQ9Y6Y0 642 aa22.26■■□□□ 1.15
CTSB-233ENST00000534636 MORN1Q5T089 497 aa22.25■■□□□ 1.15
CTSB-233ENST00000534636 LBX2Q6XYB7 198 aa22.25■■□□□ 1.15
CTSB-233ENST00000534636 GPATCH3Q96I76 525 aa22.25■■□□□ 1.15
CTSB-233ENST00000534636 SH2D4AQ9H788 454 aa22.25■■□□□ 1.15
CTSB-233ENST00000534636 ALPK3Q96L96 1907 aa22.25■■□□□ 1.15
CTSB-233ENST00000534636 CYP2D6P10635 497 aa22.24■■□□□ 1.15
CTSB-233ENST00000534636 GUCY1A2P33402 732 aa22.24■■□□□ 1.15
CTSB-233ENST00000534636 MAP3K21Q5TCX8 1036 aa22.24■■□□□ 1.15
CTSB-233ENST00000534636 C20orf194Q5TEA3 1177 aa22.24■■□□□ 1.15
CTSB-233ENST00000534636 DIS3LQ8TF46 1054 aaKnown RBP22.24■■□□□ 1.15
CTSB-233ENST00000534636 TANGO6Q9C0B7 1094 aa22.24■■□□□ 1.15
CTSB-233ENST00000534636 NBPF3Q9H094 633 aa22.24■■□□□ 1.15
CTSB-233ENST00000534636 ARHGEF10LQ9HCE6 1279 aa22.24■■□□□ 1.15
CTSB-233ENST00000534636 SPDYE16A6NNV3 312 aaPredicted RBP22.23■■□□□ 1.15
CTSB-233ENST00000534636 CNMDO75829 334 aa22.23■■□□□ 1.15
CTSB-233ENST00000534636 MAP2K5Q13163 448 aa22.23■■□□□ 1.15
CTSB-233ENST00000534636 UBE3CQ15386 1083 aa22.23■■□□□ 1.15
CTSB-233ENST00000534636 SLC44A5Q8NCS7 719 aa22.23■■□□□ 1.15
CTSB-233ENST00000534636 USP6NLQ92738 828 aa22.23■■□□□ 1.15
CTSB-233ENST00000534636 RBM27Q9P2N5 1060 aaKnown RBP22.23■■□□□ 1.15
CTSB-233ENST00000534636 PRKAB2O43741 272 aa22.22■■□□□ 1.15
CTSB-233ENST00000534636 EVX2Q03828 476 aa22.22■■□□□ 1.15
CTSB-233ENST00000534636 ICA1Q05084 483 aa22.22■■□□□ 1.15
CTSB-233ENST00000534636 MFSD14CQ5VZR4 134 aa22.22■■□□□ 1.15
CTSB-233ENST00000534636 POTEEQ6S8J3 1075 aa22.22■■□□□ 1.15
CTSB-233ENST00000534636 DYNLL2Q96FJ2 89 aa22.22■■□□□ 1.15
CTSB-233ENST00000534636 C11orf49Q9H6J7 331 aa22.22■■□□□ 1.15
CTSB-233ENST00000534636 HOXC10Q9NYD6 342 aa22.22■■□□□ 1.15
CTSB-233ENST00000534636 OGDHLQ9ULD0 1010 aa22.22■■□□□ 1.15
CTSB-233ENST00000534636 SLC15A5A6NIM6 579 aa22.21■■□□□ 1.15
CTSB-233ENST00000534636 SMARCA5O60264 1052 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms