RNA–Protein interactions for RNA: ENST00000534610.5

ATG13-222, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 1,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-222ENST00000534610 EHD4Q9H223 541 aa17.84■□□□□ 0.45
ATG13-222ENST00000534610 SCN9AQ15858 1988 aa17.84■□□□□ 0.45
ATG13-222ENST00000534610 TOMM70O94826 608 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 CXCL9Q07325 125 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 TROAPQ12815 778 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 NFIAQ12857 509 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 RESTQ13127 1097 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 ATL3Q6DD88 541 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 USP48Q86UV5 1035 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 GMLQ99445 158 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 SCAND2PQ9GZW5 306 aaPredicted RBP17.83■□□□□ 0.45
ATG13-222ENST00000534610 TDRD3Q9H7E2 651 aaKnown RBP17.83■□□□□ 0.45
ATG13-222ENST00000534610 IL17RBQ9NRM6 502 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 PI4KBQ9UBF8 816 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 CFAP45Q9UL16 551 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 STX8Q9UNK0 236 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 CNPY2Q9Y2B0 182 aa17.83■□□□□ 0.45
ATG13-222ENST00000534610 MYH1P12882 1939 aa17.83■□□□□ 0.44
ATG13-222ENST00000534610 XBP1P17861 261 aa17.83■□□□□ 0.44
ATG13-222ENST00000534610 GNAQP50148 359 aa17.83■□□□□ 0.44
ATG13-222ENST00000534610 GABPAQ06546 454 aa17.83■□□□□ 0.44
ATG13-222ENST00000534610 TCP10Q12799 353 aa17.83■□□□□ 0.44
ATG13-222ENST00000534610 FOXP4Q8IVH2 680 aaPredicted RBP17.83■□□□□ 0.44
ATG13-222ENST00000534610 TMEM87AQ8NBN3 555 aa17.83■□□□□ 0.44
ATG13-222ENST00000534610 PNMA1Q8ND90 353 aa17.83■□□□□ 0.44
ATG13-222ENST00000534610 ZNF396Q96N95 335 aaPredicted RBP17.83■□□□□ 0.44
ATG13-222ENST00000534610 RNF26Q9BY78 433 aaPredicted RBP17.83■□□□□ 0.44
ATG13-222ENST00000534610 MYO1BO43795 1136 aa17.82■□□□□ 0.44
ATG13-222ENST00000534610 HSPA6P17066 643 aa17.82■□□□□ 0.44
ATG13-222ENST00000534610 EIF6P56537 245 aaKnown RBP17.82■□□□□ 0.44
ATG13-222ENST00000534610 GUCY1B3Q02153 619 aa17.82■□□□□ 0.44
ATG13-222ENST00000534610 GNL2Q13823 731 aaKnown RBP17.82■□□□□ 0.44
ATG13-222ENST00000534610 GSE1Q14687 1217 aa17.82■□□□□ 0.44
ATG13-222ENST00000534610 RCSD1Q6JBY9 416 aa17.82■□□□□ 0.44
ATG13-222ENST00000534610 CHAMP1Q96JM3 812 aa17.82■□□□□ 0.44
ATG13-222ENST00000534610 PRMT6Q96LA8 375 aaPredicted RBP17.82■□□□□ 0.44
ATG13-222ENST00000534610 CCDC17Q96LX7 622 aa17.82■□□□□ 0.44
ATG13-222ENST00000534610 ZBTB12Q9Y330 459 aaPredicted RBP17.82■□□□□ 0.44
ATG13-222ENST00000534610 CDK5RAP2Q96SN8 1893 aa17.82■□□□□ 0.44
ATG13-222ENST00000534610 PCNTO95613 3336 aa17.81■□□□□ 0.44
ATG13-222ENST00000534610 SPDYE2BA6NHP3 402 aa17.81■□□□□ 0.44
ATG13-222ENST00000534610 FIBPO43427 364 aa17.81■□□□□ 0.44
ATG13-222ENST00000534610 SPDYE6P0CI01 402 aa17.81■□□□□ 0.44
ATG13-222ENST00000534610 RPS12P25398 132 aaKnown RBP17.81■□□□□ 0.44
ATG13-222ENST00000534610 SAFBQ15424 915 aaKnown RBP eCLIP17.81■□□□□ 0.44
ATG13-222ENST00000534610 BRAPQ7Z569 592 aa17.81■□□□□ 0.44
ATG13-222ENST00000534610 CCDC82Q8N4S0 544 aa17.81■□□□□ 0.44
ATG13-222ENST00000534610 FAM198AQ9UFP1 575 aa17.81■□□□□ 0.44
ATG13-222ENST00000534610 PCDHAC2Q9Y5I4 1007 aa17.81■□□□□ 0.44
ATG13-222ENST00000534610 FOCADQ5VW36 1801 aa17.81■□□□□ 0.44
ATG13-222ENST00000534610 TOP1P11387 765 aaKnown RBP17.8■□□□□ 0.44
ATG13-222ENST00000534610 CACNB3P54284 484 aa17.8■□□□□ 0.44
ATG13-222ENST00000534610 MTMR14Q8NCE2 650 aa17.8■□□□□ 0.44
ATG13-222ENST00000534610 GDPD2Q9HCC8 539 aa17.8■□□□□ 0.44
ATG13-222ENST00000534610 RBM27Q9P2N5 1060 aaKnown RBP17.8■□□□□ 0.44
ATG13-222ENST00000534610 DDX60LQ5H9U9 1706 aaKnown RBP17.8■□□□□ 0.44
ATG13-222ENST00000534610 ZNF541Q9H0D2 1346 aa17.8■□□□□ 0.44
ATG13-222ENST00000534610 PRPF3O43395 683 aaKnown RBP17.8■□□□□ 0.44
ATG13-222ENST00000534610 TMTC3Q6ZXV5 915 aa17.8■□□□□ 0.44
ATG13-222ENST00000534610 NBPF11Q86T75 865 aa17.8■□□□□ 0.44
ATG13-222ENST00000534610 TMEM47Q9BQJ4 181 aa17.8■□□□□ 0.44
ATG13-222ENST00000534610 DDNO94850 711 aaPredicted RBP17.79■□□□□ 0.44
ATG13-222ENST00000534610 UBE2HP62256 183 aa17.79■□□□□ 0.44
ATG13-222ENST00000534610 KRT40Q6A162 431 aa17.79■□□□□ 0.44
ATG13-222ENST00000534610 ZFPM1Q8IX07 1006 aa17.79■□□□□ 0.44
ATG13-222ENST00000534610 RBM46Q8TBY0 533 aaKnown RBP17.79■□□□□ 0.44
ATG13-222ENST00000534610 SPATA32Q96LK8 384 aa17.79■□□□□ 0.44
ATG13-222ENST00000534610 LZTS2Q9BRK4 669 aa17.79■□□□□ 0.44
ATG13-222ENST00000534610 GZF1Q9H116 711 aaPredicted RBP17.79■□□□□ 0.44
ATG13-222ENST00000534610 ZNF70Q9UC06 446 aaPredicted RBP17.79■□□□□ 0.44
ATG13-222ENST00000534610 PSME4Q14997 1843 aa17.78■□□□□ 0.44
ATG13-222ENST00000534610 GOLGA6L4A6NEF3 574 aa17.78■□□□□ 0.44
ATG13-222ENST00000534610 MPHOSPH10O00566 681 aaKnown RBP17.78■□□□□ 0.44
ATG13-222ENST00000534610 OTUD7BQ6GQQ9 843 aa17.78■□□□□ 0.44
ATG13-222ENST00000534610 CMTR1Q8N1G2 835 aaKnown RBP17.78■□□□□ 0.44
ATG13-222ENST00000534610 SYAP1Q96A49 352 aaPredicted RBP17.78■□□□□ 0.44
ATG13-222ENST00000534610 CEP95Q96GE4 821 aa17.78■□□□□ 0.44
ATG13-222ENST00000534610 PLIN4Q96Q06 1357 aa17.78■□□□□ 0.44
ATG13-222ENST00000534610 ZNF646O15015 1829 aaPredicted RBP17.78■□□□□ 0.44
ATG13-222ENST00000534610 SCN4AP35499 1836 aa17.78■□□□□ 0.44
ATG13-222ENST00000534610 ELP1O95163 1332 aa17.78■□□□□ 0.44
ATG13-222ENST00000534610 DDTLA6NHG4 134 aaPredicted RBP17.77■□□□□ 0.44
ATG13-222ENST00000534610 SHMT1P34896 483 aa17.77■□□□□ 0.44
ATG13-222ENST00000534610 GRM4Q14833 912 aa17.77■□□□□ 0.44
ATG13-222ENST00000534610 CERKLQ49MI3 558 aaPredicted RBP17.77■□□□□ 0.44
ATG13-222ENST00000534610 FKBP1CQ5VVH2 108 aa17.77■□□□□ 0.44
ATG13-222ENST00000534610 FAM173BQ6P4H8 233 aa17.77■□□□□ 0.44
ATG13-222ENST00000534610 FAM151AQ8WW52 585 aa17.77■□□□□ 0.44
ATG13-222ENST00000534610 MTMR4Q9NYA4 1195 aa17.77■□□□□ 0.44
ATG13-222ENST00000534610 TFIP11Q9UBB9 837 aaKnown RBP17.77■□□□□ 0.44
ATG13-222ENST00000534610 V9GY48 417 aaPredicted RBP17.77■□□□□ 0.44
ATG13-222ENST00000534610 TCP10L2B9ZVM9 353 aa17.77■□□□□ 0.43
ATG13-222ENST00000534610 PLEKHA8P1O95397 391 aa17.77■□□□□ 0.43
ATG13-222ENST00000534610 TTLL1O95922 423 aa17.77■□□□□ 0.43
ATG13-222ENST00000534610 POTEIP0CG38 1075 aa17.77■□□□□ 0.43
ATG13-222ENST00000534610 POTEJP0CG39 1038 aa17.77■□□□□ 0.43
ATG13-222ENST00000534610 AKR1B1P15121 316 aa17.77■□□□□ 0.43
ATG13-222ENST00000534610 SPDYE2Q495Y8 402 aa17.77■□□□□ 0.43
ATG13-222ENST00000534610 COL2A1P02458 1487 aaPredicted RBP17.77■□□□□ 0.43
ATG13-222ENST00000534610 ADAMTSL1Q8N6G6 1762 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms