RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
VPS11-205ENST00000534551 DSCC1Q9BVC3 393 aa16.68■□□□□ 0.26
VPS11-205ENST00000534551 MKNK2Q9HBH9 465 aa16.68■□□□□ 0.26
VPS11-205ENST00000534551 AS3MTQ9HBK9 375 aa16.68■□□□□ 0.26
VPS11-205ENST00000534551 CABP5Q9NP86 173 aa16.68■□□□□ 0.26
VPS11-205ENST00000534551 TAF6LQ9Y6J9 622 aa16.68■□□□□ 0.26
VPS11-205ENST00000534551 A0A0G2JMZ2 1700 aa16.67■□□□□ 0.26
VPS11-205ENST00000534551 PLIN4Q96Q06 1357 aa16.67■□□□□ 0.26
VPS11-205ENST00000534551 CDC45O75419 566 aa16.67■□□□□ 0.26
VPS11-205ENST00000534551 CTCFP49711 727 aaPredicted RBP16.67■□□□□ 0.26
VPS11-205ENST00000534551 ICA1Q05084 483 aa16.67■□□□□ 0.26
VPS11-205ENST00000534551 RRP12Q5JTH9 1297 aaKnown RBP16.67■□□□□ 0.26
VPS11-205ENST00000534551 SIAH1Q8IUQ4 282 aa16.67■□□□□ 0.26
VPS11-205ENST00000534551 REM2Q8IYK8 340 aaPredicted RBP16.67■□□□□ 0.26
VPS11-205ENST00000534551 RUFY2Q8WXA3 655 aa16.67■□□□□ 0.26
VPS11-205ENST00000534551 SAGE1Q9NXZ1 904 aa16.67■□□□□ 0.26
VPS11-205ENST00000534551 ANAPC4Q9UJX5 808 aa16.67■□□□□ 0.26
VPS11-205ENST00000534551 PDHXO00330 501 aa16.66■□□□□ 0.26
VPS11-205ENST00000534551 CYP2C8P10632 490 aa16.66■□□□□ 0.26
VPS11-205ENST00000534551 BACE1P56817 501 aa16.66■□□□□ 0.26
VPS11-205ENST00000534551 ATP2B2Q01814 1243 aa16.66■□□□□ 0.26
VPS11-205ENST00000534551 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
VPS11-205ENST00000534551 KIAA1755Q5JYT7 1200 aa16.66■□□□□ 0.26
VPS11-205ENST00000534551 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
VPS11-205ENST00000534551 GINM1Q9NU53 330 aa16.66■□□□□ 0.26
VPS11-205ENST00000534551 IGKV6D-41A0A0C4DH26 115 aa16.65■□□□□ 0.26
VPS11-205ENST00000534551 NMT2O60551 498 aa16.65■□□□□ 0.26
VPS11-205ENST00000534551 EEF2P13639 858 aaKnown RBP16.65■□□□□ 0.26
VPS11-205ENST00000534551 INHBEP58166 350 aa16.65■□□□□ 0.26
VPS11-205ENST00000534551 PDE4BQ07343 736 aa16.65■□□□□ 0.26
VPS11-205ENST00000534551 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
VPS11-205ENST00000534551 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
VPS11-205ENST00000534551 TBC1D2Q9BYX2 928 aa16.65■□□□□ 0.26
VPS11-205ENST00000534551 LSG1Q9H089 658 aaKnown RBP16.65■□□□□ 0.26
VPS11-205ENST00000534551 TOMM22Q9NS69 142 aa16.65■□□□□ 0.26
VPS11-205ENST00000534551 AGTPBP1Q9UPW5 1226 aa16.65■□□□□ 0.26
VPS11-205ENST00000534551 ADGRA2Q96PE1 1338 aa16.65■□□□□ 0.26
VPS11-205ENST00000534551 HTTP42858 3142 aa16.64■□□□□ 0.25
VPS11-205ENST00000534551 USP17L10C9JJH3 530 aa16.64■□□□□ 0.25
VPS11-205ENST00000534551 CA12O43570 354 aa16.64■□□□□ 0.25
VPS11-205ENST00000534551 ECM2O94769 699 aaPredicted RBP16.64■□□□□ 0.25
VPS11-205ENST00000534551 SLC3A2P08195 630 aaKnown RBP16.64■□□□□ 0.25
VPS11-205ENST00000534551 CAP1Q01518 475 aa16.64■□□□□ 0.25
VPS11-205ENST00000534551 TFAP4Q01664 338 aa16.64■□□□□ 0.25
VPS11-205ENST00000534551 SH3D19Q5HYK7 790 aa16.64■□□□□ 0.25
VPS11-205ENST00000534551 RASGRP2Q7LDG7 609 aa16.64■□□□□ 0.25
VPS11-205ENST00000534551 CEP95Q96GE4 821 aa16.64■□□□□ 0.25
VPS11-205ENST00000534551 RANBP6O60518 1105 aaKnown RBP16.63■□□□□ 0.25
VPS11-205ENST00000534551 PEX10O60683 326 aa16.63■□□□□ 0.25
VPS11-205ENST00000534551 TSPY3P0CV98 308 aa16.63■□□□□ 0.25
VPS11-205ENST00000534551 TSPY8P0CW00 308 aa16.63■□□□□ 0.25
VPS11-205ENST00000534551 AKNAD1Q5T1N1 836 aa16.63■□□□□ 0.25
VPS11-205ENST00000534551 FASTKD5Q7L8L6 764 aaKnown RBP16.63■□□□□ 0.25
VPS11-205ENST00000534551 ZNF444Q8N0Y2 327 aaPredicted RBP16.63■□□□□ 0.25
VPS11-205ENST00000534551 SPICE1Q8N0Z3 855 aa16.63■□□□□ 0.25
VPS11-205ENST00000534551 LRRC47Q8N1G4 583 aaKnown RBP16.63■□□□□ 0.25
VPS11-205ENST00000534551 PROCA1Q8NCQ7 364 aaPredicted RBP16.63■□□□□ 0.25
VPS11-205ENST00000534551 STAG1Q8WVM7 1258 aa16.63■□□□□ 0.25
VPS11-205ENST00000534551 KIAA1683Q9H0B3 1180 aa16.63■□□□□ 0.25
VPS11-205ENST00000534551 ANO2Q9NQ90 1003 aa16.63■□□□□ 0.25
VPS11-205ENST00000534551 TMOD4Q9NZQ9 345 aa16.63■□□□□ 0.25
VPS11-205ENST00000534551 TAOK2Q9UL54 1235 aa16.63■□□□□ 0.25
VPS11-205ENST00000534551 RBM8AQ9Y5S9 174 aaKnown RBP16.63■□□□□ 0.25
VPS11-205ENST00000534551 TSPY2A6NKD2 308 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 B4E1Z4 1266 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 ZNF213O14771 459 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 ORC4O43929 436 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 ALDH1A1P00352 501 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 CYP21A2P08686 494 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 FGRP09769 529 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 VCAM1P19320 739 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 IMMTQ16891 758 aaKnown RBP16.62■□□□□ 0.25
VPS11-205ENST00000534551 OTUD7BQ6GQQ9 843 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 USP17L2Q6R6M4 530 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 ZNF296Q8WUU4 475 aaPredicted RBP16.62■□□□□ 0.25
VPS11-205ENST00000534551 CHMP4CQ96CF2 233 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 CPA4Q9UI42 421 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 DOCK3Q8IZD9 2030 aa16.62■□□□□ 0.25
VPS11-205ENST00000534551 GPR25O00155 361 aa16.61■□□□□ 0.25
VPS11-205ENST00000534551 COL9A3Q14050 684 aaPredicted RBP16.61■□□□□ 0.25
VPS11-205ENST00000534551 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
VPS11-205ENST00000534551 STOX1Q6ZVD7 989 aa16.61■□□□□ 0.25
VPS11-205ENST00000534551 NEDD1Q8NHV4 660 aa16.61■□□□□ 0.25
VPS11-205ENST00000534551 C12orf42Q96LP6 360 aa16.61■□□□□ 0.25
VPS11-205ENST00000534551 PARK7Q99497 189 aaKnown RBP16.61■□□□□ 0.25
VPS11-205ENST00000534551 CFHR5Q9BXR6 569 aa16.61■□□□□ 0.25
VPS11-205ENST00000534551 ASCC2Q9H1I8 757 aaPredicted RBP16.61■□□□□ 0.25
VPS11-205ENST00000534551 KANSL2Q9H9L4 492 aa16.61■□□□□ 0.25
VPS11-205ENST00000534551 ZNF287Q9HBT7 754 aa16.61■□□□□ 0.25
VPS11-205ENST00000534551 ARHGEF10LQ9HCE6 1279 aa16.61■□□□□ 0.25
VPS11-205ENST00000534551 ZCCHC17Q9NP64 241 aaKnown RBP16.61■□□□□ 0.25
VPS11-205ENST00000534551 IL17RBQ9NRM6 502 aa16.61■□□□□ 0.25
VPS11-205ENST00000534551 C19orf81C9J6K1 198 aa16.6■□□□□ 0.25
VPS11-205ENST00000534551 RAD21O60216 631 aa16.6■□□□□ 0.25
VPS11-205ENST00000534551 MAP4K1Q92918 833 aa16.6■□□□□ 0.25
VPS11-205ENST00000534551 NUP88Q99567 741 aaPredicted RBP16.6■□□□□ 0.25
VPS11-205ENST00000534551 ZKSCAN3Q9BRR0 538 aa16.6■□□□□ 0.25
VPS11-205ENST00000534551 RPAP3Q9H6T3 665 aaPredicted RBP16.6■□□□□ 0.25
VPS11-205ENST00000534551 VCPKMTQ9H867 229 aa16.6■□□□□ 0.25
VPS11-205ENST00000534551 ZFYVE28Q9HCC9 887 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms