RNA–Protein interactions for RNA: ENST00000533991.1

RDX-216, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-216ENST00000533991 STK11IPQ8N1F8 1099 aa18.48■□□□□ 0.55
RDX-216ENST00000533991 PARK7Q99497 189 aaKnown RBP18.48■□□□□ 0.55
RDX-216ENST00000533991 AS3MTQ9HBK9 375 aa18.48■□□□□ 0.55
RDX-216ENST00000533991 TXNRD2Q9NNW7 524 aa18.48■□□□□ 0.55
RDX-216ENST00000533991 PTCH2Q9Y6C5 1203 aa18.48■□□□□ 0.55
RDX-216ENST00000533991 A0A0D9SFI3 127 aa18.47■□□□□ 0.55
RDX-216ENST00000533991 C19orf81C9J6K1 198 aa18.47■□□□□ 0.55
RDX-216ENST00000533991 PSMC4P43686 418 aa18.47■□□□□ 0.55
RDX-216ENST00000533991 C12orf42Q96LP6 360 aa18.47■□□□□ 0.55
RDX-216ENST00000533991 INCENPQ9NQS7 918 aa18.47■□□□□ 0.55
RDX-216ENST00000533991 RASA1P20936 1047 aa18.46■□□□□ 0.55
RDX-216ENST00000533991 RGS19P49795 217 aa18.46■□□□□ 0.55
RDX-216ENST00000533991 ZYXQ15942 572 aaKnown RBP18.46■□□□□ 0.55
RDX-216ENST00000533991 Q3C1V9 767 aa18.46■□□□□ 0.55
RDX-216ENST00000533991 USP17L2Q6R6M4 530 aa18.46■□□□□ 0.55
RDX-216ENST00000533991 ANKRD13CQ8N6S4 541 aa18.46■□□□□ 0.55
RDX-216ENST00000533991 KIAA1683Q9H0B3 1180 aa18.46■□□□□ 0.55
RDX-216ENST00000533991 RBPJLQ9UBG7 517 aa18.46■□□□□ 0.55
RDX-216ENST00000533991 SWAP70Q9UH65 585 aa18.46■□□□□ 0.55
RDX-216ENST00000533991 GABRQQ9UN88 632 aa18.46■□□□□ 0.55
RDX-216ENST00000533991 MINDY4BA8MYZ0 360 aa18.45■□□□□ 0.54
RDX-216ENST00000533991 OSBPP22059 807 aa18.45■□□□□ 0.54
RDX-216ENST00000533991 ZNF589Q86UQ0 364 aaPredicted RBP18.45■□□□□ 0.54
RDX-216ENST00000533991 NKX2-3Q8TAU0 364 aa18.45■□□□□ 0.54
RDX-216ENST00000533991 CNMDO75829 334 aa18.44■□□□□ 0.54
RDX-216ENST00000533991 SOX10P56693 466 aa18.44■□□□□ 0.54
RDX-216ENST00000533991 NMIQ13287 307 aaPredicted RBP18.44■□□□□ 0.54
RDX-216ENST00000533991 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
RDX-216ENST00000533991 ZBTB47Q9UFB7 747 aaPredicted RBP18.44■□□□□ 0.54
RDX-216ENST00000533991 TNRC18O15417 2968 aaPredicted RBP18.44■□□□□ 0.54
RDX-216ENST00000533991 MPHOSPH10O00566 681 aaKnown RBP18.43■□□□□ 0.54
RDX-216ENST00000533991 GSPT1P15170 499 aaKnown RBP18.43■□□□□ 0.54
RDX-216ENST00000533991 CATSPERGQ6ZRH7 1159 aa18.43■□□□□ 0.54
RDX-216ENST00000533991 TMEM179Q6ZVK1 233 aa18.43■□□□□ 0.54
RDX-216ENST00000533991 SKAP1Q86WV1 359 aa18.43■□□□□ 0.54
RDX-216ENST00000533991 ARMC5Q96C12 935 aa18.43■□□□□ 0.54
RDX-216ENST00000533991 IL25Q9H293 177 aa18.43■□□□□ 0.54
RDX-216ENST00000533991 TMOD4Q9NZQ9 345 aa18.43■□□□□ 0.54
RDX-216ENST00000533991 ARPP21Q9UBL0 812 aaPredicted RBP18.43■□□□□ 0.54
RDX-216ENST00000533991 SRRDQ9UH36 339 aa18.43■□□□□ 0.54
RDX-216ENST00000533991 IGKV6D-41A0A0C4DH26 115 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 PRDM1O75626 825 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 APPP05067 770 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 GNAT2P19087 354 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 VCAM1P19320 739 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 SDSP20132 328 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 HERVK_113P62684 666 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 CCDC17Q96LX7 622 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 HELLSQ9NRZ9 838 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 MORF4L1Q9UBU8 362 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 GJD2Q9UKL4 321 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 TAOK2Q9UL54 1235 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 ROBO3Q96MS0 1386 aa18.42■□□□□ 0.54
RDX-216ENST00000533991 TRIM6-TRIM34B2RNG4 842 aa18.41■□□□□ 0.54
RDX-216ENST00000533991 EEF2P13639 858 aaKnown RBP18.41■□□□□ 0.54
RDX-216ENST00000533991 PRKCZQ05513 592 aa18.41■□□□□ 0.54
RDX-216ENST00000533991 FAM110CQ1W6H9 321 aa18.41■□□□□ 0.54
RDX-216ENST00000533991 SMCR8Q8TEV9 937 aaPredicted RBP18.41■□□□□ 0.54
RDX-216ENST00000533991 TMX2Q9Y320 296 aa18.41■□□□□ 0.54
RDX-216ENST00000533991 RLFQ13129 1914 aa18.41■□□□□ 0.54
RDX-216ENST00000533991 MGAMO43451 1857 aa18.4■□□□□ 0.54
RDX-216ENST00000533991 POTEFA5A3E0 1075 aa18.4■□□□□ 0.54
RDX-216ENST00000533991 FMNL1O95466 1100 aaPredicted RBP18.4■□□□□ 0.54
RDX-216ENST00000533991 FGAP02671 866 aa18.4■□□□□ 0.54
RDX-216ENST00000533991 TDO2P48775 406 aa18.4■□□□□ 0.54
RDX-216ENST00000533991 ALX1Q15699 326 aa18.4■□□□□ 0.54
RDX-216ENST00000533991 MCMDC2Q4G0Z9 681 aa18.4■□□□□ 0.54
RDX-216ENST00000533991 SH3TC2Q8TF17 1288 aa18.4■□□□□ 0.54
RDX-216ENST00000533991 RPAP3Q9H6T3 665 aaPredicted RBP18.4■□□□□ 0.54
RDX-216ENST00000533991 GREB1LQ9C091 1923 aaPredicted RBP18.39■□□□□ 0.53
RDX-216ENST00000533991 USP17L15C9J2P7 530 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 USP17L13C9JLJ4 530 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 USP17L11C9JVI0 530 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 USP17L18D6R9N7 530 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 USP17L22D6RA61 530 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 USP17L17D6RBQ6 530 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 USP17L19D6RCP7 530 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 USP17L20D6RJB6 530 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 HSPD1P10809 573 aaKnown RBP18.39■□□□□ 0.53
RDX-216ENST00000533991 GCLCP48506 637 aaPredicted RBP18.39■□□□□ 0.53
RDX-216ENST00000533991 CTDSPL2Q05D32 466 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 PPARAQ07869 468 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 USP17L24Q0WX57 530 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 LRRFIP1Q32MZ4 808 aaKnown RBP18.39■□□□□ 0.53
RDX-216ENST00000533991 ZNF333Q96JL9 665 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 NBPF3Q9H094 633 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 PORCNQ9H237 461 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 BTBD7Q9P203 1132 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 PNMA3Q9UL41 463 aa18.39■□□□□ 0.53
RDX-216ENST00000533991 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.39■□□□□ 0.53
RDX-216ENST00000533991 IRX3P78415 501 aaPredicted RBP18.38■□□□□ 0.53
RDX-216ENST00000533991 ICA1Q05084 483 aa18.38■□□□□ 0.53
RDX-216ENST00000533991 PABPC4Q13310 644 aaKnown RBP eCLIP18.38■□□□□ 0.53
RDX-216ENST00000533991 KIF22Q14807 665 aa18.38■□□□□ 0.53
RDX-216ENST00000533991 TICAM2Q86XR7 235 aa18.38■□□□□ 0.53
RDX-216ENST00000533991 SPICE1Q8N0Z3 855 aa18.38■□□□□ 0.53
RDX-216ENST00000533991 DDRGK1Q96HY6 314 aa18.38■□□□□ 0.53
RDX-216ENST00000533991 FEZ1Q99689 392 aa18.38■□□□□ 0.53
RDX-216ENST00000533991 SPDYE16A6NNV3 312 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms