RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 GRM1Q13255 1194 aa16.6■□□□□ 0.25
CMTM1-218ENST00000533915 KCNB2Q92953 911 aa16.6■□□□□ 0.25
CMTM1-218ENST00000533915 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
CMTM1-218ENST00000533915 TCP11L1Q9NUJ3 509 aa16.6■□□□□ 0.25
CMTM1-218ENST00000533915 SYNPO2Q9UMS6 1093 aa16.6■□□□□ 0.25
CMTM1-218ENST00000533915 MANSC4A6NHS7 340 aaPredicted RBP16.59■□□□□ 0.25
CMTM1-218ENST00000533915 C19orf81C9J6K1 198 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 USP17L10C9JJH3 530 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 TTLL1O95922 423 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 CETPP11597 493 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 MCM5P33992 734 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 ANAPC15P60006 121 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 SREBF2Q12772 1141 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 SPP2Q13103 211 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 CYP4F22Q6NT55 531 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 FASTKD5Q7L8L6 764 aaKnown RBP16.59■□□□□ 0.25
CMTM1-218ENST00000533915 TTC14Q96N46 770 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 NEK1Q96PY6 1258 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 TMOD4Q9NZQ9 345 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 NYAP2Q9P242 653 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 AFG3L2Q9Y4W6 797 aa16.59■□□□□ 0.25
CMTM1-218ENST00000533915 TRIM75PA6NK02 468 aa16.58■□□□□ 0.24
CMTM1-218ENST00000533915 IRF6O14896 467 aa16.58■□□□□ 0.24
CMTM1-218ENST00000533915 MAP2K2P36507 400 aa16.58■□□□□ 0.24
CMTM1-218ENST00000533915 OTUD7BQ6GQQ9 843 aa16.58■□□□□ 0.24
CMTM1-218ENST00000533915 MTA3Q9BTC8 594 aa16.58■□□□□ 0.24
CMTM1-218ENST00000533915 GOPCQ9HD26 462 aa16.58■□□□□ 0.24
CMTM1-218ENST00000533915 MTMR4Q9NYA4 1195 aa16.58■□□□□ 0.24
CMTM1-218ENST00000533915 ZSWIM5Q9P217 1185 aa16.58■□□□□ 0.24
CMTM1-218ENST00000533915 STX8Q9UNK0 236 aa16.58■□□□□ 0.24
CMTM1-218ENST00000533915 KCNH4Q9UQ05 1017 aa16.58■□□□□ 0.24
CMTM1-218ENST00000533915 WDR33Q9C0J8 1336 aaKnown RBP16.58■□□□□ 0.24
CMTM1-218ENST00000533915 EEF2P13639 858 aaKnown RBP16.57■□□□□ 0.24
CMTM1-218ENST00000533915 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 BACE1P56817 501 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 JAG1P78504 1218 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 MKRN3Q13064 507 aaKnown RBP16.57■□□□□ 0.24
CMTM1-218ENST00000533915 USP17L2Q6R6M4 530 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 DGKHQ86XP1 1220 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 CEP95Q96GE4 821 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 ZSCAN10Q96SZ4 725 aaPredicted RBP16.57■□□□□ 0.24
CMTM1-218ENST00000533915 BACH2Q9BYV9 841 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 KIAA1683Q9H0B3 1180 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 CLIP2Q9UDT6 1046 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 SNX14Q9Y5W7 946 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 TACC3Q9Y6A5 838 aa16.57■□□□□ 0.24
CMTM1-218ENST00000533915 WDR19Q8NEZ3 1342 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 FAM155AB1AL88 458 aaPredicted RBP16.56■□□□□ 0.24
CMTM1-218ENST00000533915 SEC24BO95487 1268 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 VEGFBP49765 207 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 HTRA3P83110 453 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 FGD1P98174 961 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
CMTM1-218ENST00000533915 BLOC1S2Q6QNY1 142 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 STOX1Q6ZVD7 989 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 RASEFQ8IZ41 740 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 TMTC2Q8N394 836 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 JAKMIP1Q96N16 626 aaKnown RBP16.56■□□□□ 0.24
CMTM1-218ENST00000533915 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
CMTM1-218ENST00000533915 TMX2Q9Y320 296 aa16.56■□□□□ 0.24
CMTM1-218ENST00000533915 GREB1LQ9C091 1923 aaPredicted RBP16.56■□□□□ 0.24
CMTM1-218ENST00000533915 PHIPQ8WWQ0 1821 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 CCL15-CCL14A0A0B4J2E2 113 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 A0A0G2JLL6 359 aaPredicted RBP16.55■□□□□ 0.24
CMTM1-218ENST00000533915 IFIT3O14879 490 aaKnown RBP16.55■□□□□ 0.24
CMTM1-218ENST00000533915 TOP1P11387 765 aaKnown RBP16.55■□□□□ 0.24
CMTM1-218ENST00000533915 MTMR2Q13614 643 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 CCL15Q16663 113 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 SHROOM1Q2M3G4 852 aaPredicted RBP16.55■□□□□ 0.24
CMTM1-218ENST00000533915 DHX32Q7L7V1 743 aaKnown RBP16.55■□□□□ 0.24
CMTM1-218ENST00000533915 PRRT2Q7Z6L0 340 aaPredicted RBP16.55■□□□□ 0.24
CMTM1-218ENST00000533915 MB21D2Q8IYB1 491 aaPredicted RBP16.55■□□□□ 0.24
CMTM1-218ENST00000533915 PROCA1Q8NCQ7 364 aaPredicted RBP16.55■□□□□ 0.24
CMTM1-218ENST00000533915 LPAR1Q92633 364 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 MKL1Q969V6 931 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 TMEM87BQ96K49 555 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 C22orf23Q9BZE7 217 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 TM6SF1Q9BZW5 370 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.55■□□□□ 0.24
CMTM1-218ENST00000533915 CYP46A1Q9Y6A2 500 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 TAF6LQ9Y6J9 622 aa16.55■□□□□ 0.24
CMTM1-218ENST00000533915 TNKSO95271 1327 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 PRC1O43663 620 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 GJA5P36382 358 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 HMGCS2P54868 508 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 KIF23Q02241 960 aaPredicted RBP16.54■□□□□ 0.24
CMTM1-218ENST00000533915 TMEM67Q5HYA8 995 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 SH3D19Q5HYK7 790 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 IFIT1BQ5T764 474 aaKnown RBP16.54■□□□□ 0.24
CMTM1-218ENST00000533915 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 CCDC84Q86UT8 332 aaPredicted RBP16.54■□□□□ 0.24
CMTM1-218ENST00000533915 ACER1Q8TDN7 264 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 KAT14Q9H8E8 782 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 IL17RBQ9NRM6 502 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 MYH4Q9Y623 1939 aa16.54■□□□□ 0.24
CMTM1-218ENST00000533915 TESPA1A2RU30 521 aaPredicted RBP16.53■□□□□ 0.24
CMTM1-218ENST00000533915 RAD21O60216 631 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms