RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 RBL2Q08999 1139 aa21.99■■□□□ 1.11
CAPN1-226ENST00000533820 FOXP1Q9H334 677 aaPredicted RBP21.99■■□□□ 1.11
CAPN1-226ENST00000533820 TNKSO95271 1327 aa21.99■■□□□ 1.11
CAPN1-226ENST00000533820 TRIM66O15016 1216 aa21.99■■□□□ 1.11
CAPN1-226ENST00000533820 FGFR2P21802 821 aa21.99■■□□□ 1.11
CAPN1-226ENST00000533820 ALX1Q15699 326 aa21.99■■□□□ 1.11
CAPN1-226ENST00000533820 SUSD4Q5VX71 490 aa21.99■■□□□ 1.11
CAPN1-226ENST00000533820 BLZF1Q9H2G9 400 aa21.99■■□□□ 1.11
CAPN1-226ENST00000533820 SRPRBQ9Y5M8 271 aaKnown RBP21.99■■□□□ 1.11
CAPN1-226ENST00000533820 STK36Q9NRP7 1315 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 IGSF22Q8N9C0 903 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 ZRANB2O95218 330 aaKnown RBP eCLIP21.98■■□□□ 1.114e-7■■■■■ 32.1
CAPN1-226ENST00000533820 PLEKHA8P1O95397 391 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 TUBB4AP04350 444 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 SARSP49591 514 aaKnown RBP21.98■■□□□ 1.11
CAPN1-226ENST00000533820 PPARAQ07869 468 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 SYMPKQ92797 1274 aaKnown RBP21.98■■□□□ 1.11
CAPN1-226ENST00000533820 DACH1Q9UI36 760 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 ATRNO75882 1429 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 UBR2Q8IWV8 1755 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 TRIM75PA6NK02 468 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 RAD9BQ6WBX8 426 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 PPFIBP1Q86W92 1011 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 MAPK8IP1Q9UQF2 711 aa21.98■■□□□ 1.11
CAPN1-226ENST00000533820 PLCD1P51178 756 aa21.97■■□□□ 1.11
CAPN1-226ENST00000533820 FAM193AP78312 1265 aa21.97■■□□□ 1.11
CAPN1-226ENST00000533820 EVX2Q03828 476 aa21.97■■□□□ 1.11
CAPN1-226ENST00000533820 SRRTQ9BXP5 876 aaKnown RBP21.97■■□□□ 1.11
CAPN1-226ENST00000533820 PARD6BQ9BYG5 372 aa21.97■■□□□ 1.11
CAPN1-226ENST00000533820 RASSF4Q9H2L5 321 aa21.97■■□□□ 1.11
CAPN1-226ENST00000533820 BTG4Q9NY30 223 aa21.97■■□□□ 1.11
CAPN1-226ENST00000533820 AKR1B15C9JRZ8 316 aaPredicted RBP21.97■■□□□ 1.11
CAPN1-226ENST00000533820 NOP2P46087 812 aaKnown RBP21.97■■□□□ 1.11
CAPN1-226ENST00000533820 MAP3K9P80192 1104 aa21.97■■□□□ 1.11
CAPN1-226ENST00000533820 NEK11Q8NG66 645 aa21.97■■□□□ 1.11
CAPN1-226ENST00000533820 DNAJC5Q9H3Z4 198 aa21.97■■□□□ 1.11
CAPN1-226ENST00000533820 CDC25AP30304 524 aa21.96■■□□□ 1.11
CAPN1-226ENST00000533820 NR1I3Q14994 352 aa21.96■■□□□ 1.11
CAPN1-226ENST00000533820 MRFAP1Q9Y605 127 aa21.96■■□□□ 1.11
CAPN1-226ENST00000533820 MROH5Q6ZUA9 1318 aa21.96■■□□□ 1.11
CAPN1-226ENST00000533820 STAG1Q8WVM7 1258 aa21.96■■□□□ 1.11
CAPN1-226ENST00000533820 CCDC196A0A1B0GTZ2 297 aa21.95■■□□□ 1.11
CAPN1-226ENST00000533820 FCHSD1Q86WN1 690 aa21.95■■□□□ 1.11
CAPN1-226ENST00000533820 KIFC2Q96AC6 838 aa21.95■■□□□ 1.11
CAPN1-226ENST00000533820 SYNRGQ9UMZ2 1314 aa21.95■■□□□ 1.1
CAPN1-226ENST00000533820 ABL1P00519 1130 aa21.95■■□□□ 1.1
CAPN1-226ENST00000533820 GYG1P46976 350 aa21.95■■□□□ 1.1
CAPN1-226ENST00000533820 DYNLL1P63167 89 aaKnown RBP21.95■■□□□ 1.1
CAPN1-226ENST00000533820 TBC1D8O95759 1140 aa21.95■■□□□ 1.1
CAPN1-226ENST00000533820 CCDC175P0C221 793 aa21.95■■□□□ 1.1
CAPN1-226ENST00000533820 CASP14P31944 242 aa21.95■■□□□ 1.1
CAPN1-226ENST00000533820 CC2D1AQ6P1N0 951 aaPredicted RBP21.95■■□□□ 1.1
CAPN1-226ENST00000533820 PAGE5Q96GU1 130 aa21.95■■□□□ 1.1
CAPN1-226ENST00000533820 ECM29Q5VYK3 1845 aa21.95■■□□□ 1.1
CAPN1-226ENST00000533820 ST5P78524 1137 aa21.94■■□□□ 1.1
CAPN1-226ENST00000533820 CEP131Q9UPN4 1083 aa21.94■■□□□ 1.1
CAPN1-226ENST00000533820 CTNND2Q9UQB3 1225 aa21.94■■□□□ 1.1
CAPN1-226ENST00000533820 ZNF569Q5MCW4 686 aa21.94■■□□□ 1.1
CAPN1-226ENST00000533820 BANK1Q8NDB2 785 aa21.94■■□□□ 1.1
CAPN1-226ENST00000533820 OAS2P29728 719 aaKnown RBP21.93■■□□□ 1.1
CAPN1-226ENST00000533820 CYP2C19P33261 490 aa21.93■■□□□ 1.1
CAPN1-226ENST00000533820 NT5DC1Q5TFE4 455 aa21.93■■□□□ 1.1
CAPN1-226ENST00000533820 ACRBPQ8NEB7 543 aa21.93■■□□□ 1.1
CAPN1-226ENST00000533820 VPS16Q9H269 839 aa21.93■■□□□ 1.1
CAPN1-226ENST00000533820 NMT2O60551 498 aa21.93■■□□□ 1.1
CAPN1-226ENST00000533820 DPYDQ12882 1025 aa21.93■■□□□ 1.1
CAPN1-226ENST00000533820 ENAHQ8N8S7 591 aaPredicted RBP21.93■■□□□ 1.1
CAPN1-226ENST00000533820 DDX60Q8IY21 1712 aaKnown RBP21.93■■□□□ 1.1
CAPN1-226ENST00000533820 PARP4Q9UKK3 1724 aaKnown RBP21.93■■□□□ 1.1
CAPN1-226ENST00000533820 A0A1B0GTH6 734 aa21.93■■□□□ 1.1
CAPN1-226ENST00000533820 BCCIPQ9P287 314 aaKnown RBP eCLIP21.93■■□□□ 1.1
CAPN1-226ENST00000533820 CDC5LQ99459 802 aaKnown RBP21.92■■□□□ 1.1
CAPN1-226ENST00000533820 ARFGAP3Q9NP61 516 aa21.92■■□□□ 1.1
CAPN1-226ENST00000533820 SLAIN2Q9P270 581 aa21.92■■□□□ 1.1
CAPN1-226ENST00000533820 SOS2Q07890 1332 aaPredicted RBP21.92■■□□□ 1.1
CAPN1-226ENST00000533820 MYO1BO43795 1136 aa21.92■■□□□ 1.1
CAPN1-226ENST00000533820 VEGFAP15692 232 aaPredicted RBP21.92■■□□□ 1.1
CAPN1-226ENST00000533820 KRT2P35908 639 aa21.92■■□□□ 1.1
CAPN1-226ENST00000533820 FXR1P51114 621 aaKnown RBP eCLIP21.92■■□□□ 1.1
CAPN1-226ENST00000533820 PKN1Q16512 942 aa21.92■■□□□ 1.1
CAPN1-226ENST00000533820 IFIT1BQ5T764 474 aaKnown RBP21.92■■□□□ 1.1
CAPN1-226ENST00000533820 ESR2Q92731 530 aa21.92■■□□□ 1.1
CAPN1-226ENST00000533820 MTMR7Q9Y216 660 aa21.92■■□□□ 1.1
CAPN1-226ENST00000533820 ADGRG1Q9Y653 693 aa21.92■■□□□ 1.1
CAPN1-226ENST00000533820 GOLGA6L9A6NEM1 432 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 PES1O00541 588 aaKnown RBP21.91■■□□□ 1.1
CAPN1-226ENST00000533820 SPATA1Q5VX52 437 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 KANK3Q6NY19 840 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 RNF41Q9H4P4 317 aaPredicted RBP21.91■■□□□ 1.1
CAPN1-226ENST00000533820 IGHMBP2P38935 993 aaKnown RBP21.91■■□□□ 1.1
CAPN1-226ENST00000533820 CHRNDQ07001 517 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 PTGDRQ13258 359 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 SMC1AQ14683 1233 aaKnown RBP21.91■■□□□ 1.1
CAPN1-226ENST00000533820 KIF4BQ2VIQ3 1234 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 CT47A1Q5JQC4 288 aaPredicted RBP21.91■■□□□ 1.1
CAPN1-226ENST00000533820 GPR161Q8N6U8 529 aaKnown RBP21.91■■□□□ 1.1
CAPN1-226ENST00000533820 STRCP1A6NGW2 1772 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 MAGEB6P1A0A0J9YX57 407 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 ADAMTS3O15072 1205 aa21.91■■□□□ 1.1
CAPN1-226ENST00000533820 APTXQ7Z2E3 356 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms