RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 A0A1W2PQ45 241 aaPredicted RBP13.3□□□□□ -0.28
CSDE1-215ENST00000533818 A0A1W2PQY0 241 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 APBB1O00213 710 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 SSTR3P32745 418 aaPredicted RBP13.3□□□□□ -0.28
CSDE1-215ENST00000533818 RABGGTBP53611 331 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 GNAI1P63096 354 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 GRB14Q14449 540 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 METTL24Q5JXM2 366 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 OLFML2BQ68BL8 750 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 DPP9Q86TI2 863 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 TMEM199Q8N511 208 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 MTIF3Q9H2K0 278 aaKnown RBP13.3□□□□□ -0.28
CSDE1-215ENST00000533818 IFT57Q9NWB7 429 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 TBX21Q9UL17 535 aa13.3□□□□□ -0.28
CSDE1-215ENST00000533818 DOCK2Q92608 1830 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 PRRC2BQ5JSZ5 2229 aaKnown RBP13.29□□□□□ -0.28
CSDE1-215ENST00000533818 C19orf81C9J6K1 198 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 MYOGP15173 224 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 RRP1BQ14684 758 aaKnown RBP13.29□□□□□ -0.28
CSDE1-215ENST00000533818 PRAMEF19Q5SWL8 479 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 KRT40Q6A162 431 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 RNF180Q86T96 592 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 TSPYL6Q8N831 410 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 RUNDC1Q96C34 613 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 XPNPEP3Q9NQH7 507 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 USP34Q70CQ2 3546 aa13.29□□□□□ -0.28
CSDE1-215ENST00000533818 CNMDO75829 334 aa13.28□□□□□ -0.28
CSDE1-215ENST00000533818 PDE8BO95263 885 aa13.28□□□□□ -0.28
CSDE1-215ENST00000533818 FGBP02675 491 aa13.28□□□□□ -0.28
CSDE1-215ENST00000533818 FAM178BQ8IXR5 827 aa13.28□□□□□ -0.28
CSDE1-215ENST00000533818 ANKS1AQ92625 1134 aa13.28□□□□□ -0.28
CSDE1-215ENST00000533818 SPTBN4Q9H254 2564 aa13.27□□□□□ -0.28
CSDE1-215ENST00000533818 IFIT1P09914 478 aaKnown RBP13.27□□□□□ -0.29
CSDE1-215ENST00000533818 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.29
CSDE1-215ENST00000533818 IL23AQ9NPF7 189 aa13.27□□□□□ -0.29
CSDE1-215ENST00000533818 PCDHA11Q9Y5I1 949 aa13.27□□□□□ -0.29
CSDE1-215ENST00000533818 RFX7Q2KHR2 1363 aa13.27□□□□□ -0.29
CSDE1-215ENST00000533818 ZFHX2Q9C0A1 2572 aaPredicted RBP13.27□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L10C9JJH3 530 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 DCXO43602 365 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 GFRA3O60609 400 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 PGK1P00558 417 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 RARBP10826 455 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 FLIIQ13045 1269 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 LRRC24Q50LG9 513 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 VGLL2Q8N8G2 317 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 KIF16BQ96L93 1317 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 MFSD14AQ96MC6 490 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 CERS4Q9HA82 394 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 STARD7Q9NQZ5 370 aa13.26□□□□□ -0.29
CSDE1-215ENST00000533818 ADORA2AP29274 412 aa13.25□□□□□ -0.29
CSDE1-215ENST00000533818 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
CSDE1-215ENST00000533818 HFE2Q6ZVN8 426 aa13.25□□□□□ -0.29
CSDE1-215ENST00000533818 OTOP2Q7RTS6 562 aa13.25□□□□□ -0.29
CSDE1-215ENST00000533818 PPP1R12CQ9BZL4 782 aa13.25□□□□□ -0.29
CSDE1-215ENST00000533818 CACNA1GO43497 2377 aa13.25□□□□□ -0.29
CSDE1-215ENST00000533818 GAKO14976 1311 aa13.24□□□□□ -0.29
CSDE1-215ENST00000533818 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
CSDE1-215ENST00000533818 GRM8O00222 908 aa13.24□□□□□ -0.29
CSDE1-215ENST00000533818 ASNSP08243 561 aa13.24□□□□□ -0.29
CSDE1-215ENST00000533818 PTPN5P54829 565 aa13.24□□□□□ -0.29
CSDE1-215ENST00000533818 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
CSDE1-215ENST00000533818 ERMP1Q7Z2K6 904 aa13.24□□□□□ -0.29
CSDE1-215ENST00000533818 NUP133Q8WUM0 1156 aa13.24□□□□□ -0.29
CSDE1-215ENST00000533818 EMILIN3Q9NT22 766 aa13.24□□□□□ -0.29
CSDE1-215ENST00000533818 SLC4A7Q9Y6M7 1214 aa13.24□□□□□ -0.29
CSDE1-215ENST00000533818 EPOPA6NHQ4 379 aa13.23□□□□□ -0.29
CSDE1-215ENST00000533818 STRNO43815 780 aa13.23□□□□□ -0.29
CSDE1-215ENST00000533818 BTDP43251 543 aa13.23□□□□□ -0.29
CSDE1-215ENST00000533818 ACLYP53396 1101 aa13.23□□□□□ -0.29
CSDE1-215ENST00000533818 PUM3Q15397 648 aaKnown RBP13.23□□□□□ -0.29
CSDE1-215ENST00000533818 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
CSDE1-215ENST00000533818 PRSS33Q8NF86 280 aa13.23□□□□□ -0.29
CSDE1-215ENST00000533818 TSEN34Q9BSV6 310 aaKnown RBP13.23□□□□□ -0.29
CSDE1-215ENST00000533818 SLC5A4Q9NY91 659 aa13.23□□□□□ -0.29
CSDE1-215ENST00000533818 BTBD7Q9P203 1132 aa13.23□□□□□ -0.29
CSDE1-215ENST00000533818 C5orf42Q9H799 3197 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 MROH7Q68CQ1 1323 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L15C9J2P7 530 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L13C9JLJ4 530 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L11C9JVI0 530 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L18D6R9N7 530 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L22D6RA61 530 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L17D6RBQ6 530 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L19D6RCP7 530 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L20D6RJB6 530 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 COBLO75128 1261 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 FGFR2P21802 821 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 CYP2C18P33260 490 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 JAG1P78504 1218 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L24Q0WX57 530 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 TMEM67Q5HYA8 995 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 BEND3Q5T5X7 828 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 USP17L2Q6R6M4 530 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 SLF2Q8IX21 1173 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 ARNTL2Q8WYA1 636 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 PCGF6Q9BYE7 350 aa13.22□□□□□ -0.29
CSDE1-215ENST00000533818 C9orf78Q9NZ63 289 aaPredicted RBP13.22□□□□□ -0.29
CSDE1-215ENST00000533818 HERC5Q9UII4 1024 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms