RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 METTL16Q86W50 562 aaKnown RBP15.23■□□□□ 0.03
SVIP-205ENST00000533774 CCAR1Q8IX12 1150 aaKnown RBP15.23■□□□□ 0.03
SVIP-205ENST00000533774 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
SVIP-205ENST00000533774 REV3LO60673 3130 aa15.23■□□□□ 0.03
SVIP-205ENST00000533774 GBF1Q92538 1859 aa15.23■□□□□ 0.03
SVIP-205ENST00000533774 A0A1B0GUL7 405 aa15.22■□□□□ 0.03
SVIP-205ENST00000533774 SLC15A5A6NIM6 579 aa15.22■□□□□ 0.03
SVIP-205ENST00000533774 MAP4K4O95819 1239 aaPredicted RBP15.22■□□□□ 0.03
SVIP-205ENST00000533774 HOXC6P09630 235 aa15.22■□□□□ 0.03
SVIP-205ENST00000533774 COPRSQ9NQ92 184 aa15.22■□□□□ 0.03
SVIP-205ENST00000533774 BTBD7Q9P203 1132 aa15.22■□□□□ 0.03
SVIP-205ENST00000533774 PI4KBQ9UBF8 816 aa15.22■□□□□ 0.03
SVIP-205ENST00000533774 ZBTB21Q9ULJ3 1066 aa15.22■□□□□ 0.03
SVIP-205ENST00000533774 RABGAP1Q9Y3P9 1069 aa15.22■□□□□ 0.03
SVIP-205ENST00000533774 BDP1A6H8Y1 2624 aa15.22■□□□□ 0.03
SVIP-205ENST00000533774 CHD9Q3L8U1 2897 aa15.21■□□□□ 0.03
SVIP-205ENST00000533774 LDHCP07864 332 aa15.21■□□□□ 0.03
SVIP-205ENST00000533774 ATP2B2Q01814 1243 aa15.21■□□□□ 0.03
SVIP-205ENST00000533774 GRB14Q14449 540 aa15.21■□□□□ 0.03
SVIP-205ENST00000533774 GTF3C2Q8WUA4 911 aaPredicted RBP15.21■□□□□ 0.03
SVIP-205ENST00000533774 MSCO60682 206 aa15.2■□□□□ 0.02
SVIP-205ENST00000533774 TFCP2Q12800 502 aa15.2■□□□□ 0.02
SVIP-205ENST00000533774 ZYXQ15942 572 aaKnown RBP15.2■□□□□ 0.02
SVIP-205ENST00000533774 WDR78Q5VTH9 848 aa15.2■□□□□ 0.02
SVIP-205ENST00000533774 USP17L2Q6R6M4 530 aa15.2■□□□□ 0.02
SVIP-205ENST00000533774 MAPKAPK5Q8IW41 473 aa15.2■□□□□ 0.02
SVIP-205ENST00000533774 FERMT2Q96AC1 680 aa15.2■□□□□ 0.02
SVIP-205ENST00000533774 RAI14Q9P0K7 980 aa15.2■□□□□ 0.02
SVIP-205ENST00000533774 PALD1Q9ULE6 856 aa15.2■□□□□ 0.02
SVIP-205ENST00000533774 TMEM265A0A087WTH1 108 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 UBTFL1P0CB47 393 aaPredicted RBP15.19■□□□□ 0.02
SVIP-205ENST00000533774 PLA2G5P39877 138 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 ADCYAP1R1P41586 468 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 GSTO1P78417 241 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 ADGRA1Q86SQ6 560 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 SPATA5Q8NB90 893 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 TGFBRAP1Q8WUH2 860 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 C12orf42Q96LP6 360 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 DHX36Q9H2U1 1008 aaKnown RBP15.19■□□□□ 0.02
SVIP-205ENST00000533774 CWC22Q9HCG8 908 aaKnown RBP15.19■□□□□ 0.02
SVIP-205ENST00000533774 MRS2Q9HD23 443 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 AATFQ9NY61 560 aaKnown RBP eCLIP15.19■□□□□ 0.02
SVIP-205ENST00000533774 A0A0G2JMZ2 1700 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 PARP14Q460N5 1801 aa15.19■□□□□ 0.02
SVIP-205ENST00000533774 FLT1P17948 1338 aa15.18■□□□□ 0.02
SVIP-205ENST00000533774 ZNF521Q96K83 1311 aa15.18■□□□□ 0.02
SVIP-205ENST00000533774 COL11A1P12107 1806 aaPredicted RBP15.18■□□□□ 0.02
SVIP-205ENST00000533774 MCAMP43121 646 aa15.18■□□□□ 0.02
SVIP-205ENST00000533774 TLE2Q04725 743 aa15.18■□□□□ 0.02
SVIP-205ENST00000533774 PRAMEF19Q5SWL8 479 aa15.18■□□□□ 0.02
SVIP-205ENST00000533774 CATSPERGQ6ZRH7 1159 aa15.18■□□□□ 0.02
SVIP-205ENST00000533774 FOXP4Q8IVH2 680 aaPredicted RBP15.18■□□□□ 0.02
SVIP-205ENST00000533774 ARRDC4Q8NCT1 418 aa15.18■□□□□ 0.02
SVIP-205ENST00000533774 RNPC3Q96LT9 517 aaKnown RBP15.18■□□□□ 0.02
SVIP-205ENST00000533774 USP17L15C9J2P7 530 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 USP17L13C9JLJ4 530 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 KBTBD13C9JR72 458 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 USP17L11C9JVI0 530 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 USP17L18D6R9N7 530 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 USP17L22D6RA61 530 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 USP17L17D6RBQ6 530 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 USP17L19D6RCP7 530 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 USP17L20D6RJB6 530 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 GLRX3O76003 335 aaKnown RBP15.17■□□□□ 0.02
SVIP-205ENST00000533774 GH2P01242 217 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 DNAJB2P25686 324 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 ARID4AP29374 1257 aaPredicted RBP15.17■□□□□ 0.02
SVIP-205ENST00000533774 CCNA1P78396 465 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 USP17L24Q0WX57 530 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 MVPQ14764 893 aaKnown RBP15.17■□□□□ 0.02
SVIP-205ENST00000533774 LRRC41Q15345 812 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 ACER1Q8TDN7 264 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 GINM1Q9NU53 330 aa15.17■□□□□ 0.02
SVIP-205ENST00000533774 SAP30BPQ9UHR5 308 aaKnown RBP15.17■□□□□ 0.02
SVIP-205ENST00000533774 CHD7Q9P2D1 2997 aa15.16■□□□□ 0.02
SVIP-205ENST00000533774 SPDYE16A6NNV3 312 aaPredicted RBP15.16■□□□□ 0.02
SVIP-205ENST00000533774 COBLO75128 1261 aa15.16■□□□□ 0.02
SVIP-205ENST00000533774 FAM47AQ5JRC9 791 aa15.16■□□□□ 0.02
SVIP-205ENST00000533774 C1orf53Q5VUE5 145 aa15.16■□□□□ 0.02
SVIP-205ENST00000533774 LBX2Q6XYB7 198 aa15.16■□□□□ 0.02
SVIP-205ENST00000533774 CRACR2BQ8N4Y2 399 aaPredicted RBP15.16■□□□□ 0.02
SVIP-205ENST00000533774 PPM1EQ8WY54 764 aa15.16■□□□□ 0.02
SVIP-205ENST00000533774 NEUROD6Q96NK8 337 aa15.16■□□□□ 0.02
SVIP-205ENST00000533774 ZNF576Q9H609 170 aa15.16■□□□□ 0.02
SVIP-205ENST00000533774 SEPT4O43236 478 aa15.15■□□□□ 0.02
SVIP-205ENST00000533774 VCAM1P19320 739 aa15.15■□□□□ 0.02
SVIP-205ENST00000533774 ADORA2AP29274 412 aa15.15■□□□□ 0.02
SVIP-205ENST00000533774 VASPP50552 380 aaPredicted RBP15.15■□□□□ 0.02
SVIP-205ENST00000533774 PPP4CP60510 307 aa15.15■□□□□ 0.02
SVIP-205ENST00000533774 OLFML2BQ68BL8 750 aa15.15■□□□□ 0.02
SVIP-205ENST00000533774 MEIS3Q99687 375 aa15.15■□□□□ 0.02
SVIP-205ENST00000533774 IVNS1ABPQ9Y6Y0 642 aa15.15■□□□□ 0.02
SVIP-205ENST00000533774 KIAA0355O15063 1070 aa15.14■□□□□ 0.01
SVIP-205ENST00000533774 ADAMTS19Q8TE59 1207 aa15.14■□□□□ 0.01
SVIP-205ENST00000533774 FAM122AQ96E09 287 aa15.14■□□□□ 0.01
SVIP-205ENST00000533774 MOV10L1Q9BXT6 1211 aaKnown RBP15.14■□□□□ 0.01
SVIP-205ENST00000533774 SNRKQ9NRH2 765 aa15.14■□□□□ 0.01
SVIP-205ENST00000533774 LRP2BPQ9P2M1 347 aa15.14■□□□□ 0.01
SVIP-205ENST00000533774 AKAP2Q9Y2D5 859 aa15.14■□□□□ 0.01
SVIP-205ENST00000533774 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms