RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 MCTP2Q6DN12 878 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 NELFCDQ8IXH7 590 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 SEPT12Q8IYM1 358 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 ZNF654Q8IZM8 581 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 IGSF22Q8N9C0 903 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 IFT81Q8WYA0 676 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 NT5C3AQ9H0P0 336 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 PTPRTO14522 1441 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 SLU7O95391 586 aaKnown RBP7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 ERCC3P19447 782 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 TUBB4BP68371 445 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 GABPAQ06546 454 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 KMT5BQ4FZB7 885 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 UTP14CQ5TAP6 766 aaKnown RBP7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 PPP1R21Q6ZMI0 780 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 EDC3Q96F86 508 aaKnown RBP7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 FAM193BQ96PV7 902 aaPredicted RBP7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 NAP1L3Q99457 506 aaPredicted RBP7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 BAG1Q99933 345 aaPredicted RBP7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 DISP1Q96F81 1524 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 TLDC2A0PJX2 215 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 SMIM23A6NLE4 172 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 ATP2C2O75185 946 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 MYCP01106 439 aaPredicted RBP7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 PDE6AP16499 860 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 KCTD2Q14681 263 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 IFNL3Q8IZI9 196 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 SELENOSQ9BQE4 189 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 SUGCTQ9HAC7 445 aa7.11□□□□□ -1.27
UBQLN1-206ENST00000533705 SYNRGQ9UMZ2 1314 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 POLR2MP0CAP2 368 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 TNNI1P19237 187 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 DCUN1D2Q6PH85 259 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 MLKLQ8NB16 471 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 ATRIPQ8WXE1 791 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 IWS1Q96ST2 819 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 DBNDD1Q9H9R9 158 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 XDHP47989 1333 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 PALM3A6NDB9 673 aaPredicted RBP7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 STK10O94804 968 aaKnown RBP7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 ABL1P00519 1130 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 IL6STP40189 918 aaPredicted RBP7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 ABCB5Q2M3G0 1257 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 FAM102BQ5T8I3 360 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 RDH13Q8NBN7 331 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 GIMAP7Q8NHV1 300 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 SMC6Q96SB8 1091 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 ZSCAN10Q96SZ4 725 aaPredicted RBP7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 RIOK1Q9BRS2 568 aaKnown RBP7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 PSTPIP2Q9H939 334 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 ZBTB1Q9Y2K1 713 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 TMEM232C9JQI7 657 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 RAD17O75943 681 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 P4HA1P13674 534 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 CCNA1P78396 465 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 SUPT20HL1Q3ZLR7 823 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 MCF2L2Q86YR7 1114 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 CCDC125Q86Z20 511 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 GPR161Q8N6U8 529 aaKnown RBP7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 CCDC26Q8TAB7 109 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 NPHP4O75161 1426 aaPredicted RBP7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 PSMC4P43686 418 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 YARSP54577 528 aaKnown RBP7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 IGBP1P78318 339 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 MAP7D1Q3KQU3 841 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 PRR16Q569H4 304 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 FAM173BQ6P4H8 233 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 FBXO11Q86XK2 927 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 USP44Q9H0E7 712 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 GREM2Q9H772 168 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 GOLGA8HP0CJ92 632 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 CCDC6Q16204 474 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 LRRC24Q50LG9 513 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 DALRD3Q5D0E6 543 aaKnown RBP7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 SLFN13Q68D06 897 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 TMC4Q7Z404 712 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 ZBTB8OSQ8IWT0 167 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 PNMA1Q8ND90 353 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 NSMCE1Q8WV22 266 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 CSRNP1Q96S65 589 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 NUP58Q9BVL2 599 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 CEP170Q5SW79 1584 aa7.1□□□□□ -1.27
UBQLN1-206ENST00000533705 KDM3AQ9Y4C1 1321 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 DNMT1P26358 1616 aaKnown RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 BCRP11274 1271 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 PPP2R5DQ14738 602 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 SLC9C1Q4G0N8 1177 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 ARMC9Q7Z3E5 817 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 UNC5CLQ8IV45 518 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 GABPB2Q8TAK5 448 aaPredicted RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 PRKAG2Q9UGJ0 569 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 CCPG1Q9ULG6 757 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 USTQ9Y2C2 406 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 LEMD3Q9Y2U8 911 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 ZNF335Q9H4Z2 1342 aaPredicted RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 ALDH3A1P30838 453 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 MKRN3Q13064 507 aaKnown RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 XKR9Q5GH70 373 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms