RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 POLR3GO15318 223 aaPredicted RBP18.91■□□□□ 0.62
CTSB-228ENST00000533455 PRKAB2O43741 272 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 RRP12Q5JTH9 1297 aaKnown RBP18.91■□□□□ 0.62
CTSB-228ENST00000533455 LCORLQ8N3X6 602 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 IGSF22Q8N9C0 903 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 CCDC51Q96ER9 411 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 ZKSCAN3Q9BRR0 538 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 CABP5Q9NP86 173 aa18.91■□□□□ 0.62
CTSB-228ENST00000533455 XIRP1Q702N8 1843 aaKnown RBP18.91■□□□□ 0.62
CTSB-228ENST00000533455 A0A087X0B3 334 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 MFAP3LO75121 409 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 RBL2Q08999 1139 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 RASGRP2Q7LDG7 609 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 AK7Q96M32 723 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 SLC4A4Q9Y6R1 1079 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 POTEB2H3BUK9 544 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 BMP15O95972 392 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 CD44P16070 742 aaKnown RBP18.9■□□□□ 0.62
CTSB-228ENST00000533455 CHMP4BP1P59074 171 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 DPYDQ12882 1025 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 CEP112Q8N8E3 955 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 HNRNPLLQ8WVV9 542 aaKnown RBP18.9■□□□□ 0.62
CTSB-228ENST00000533455 SHISA4Q96DD7 197 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 PAGE5Q96GU1 130 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 GSDMAQ96QA5 445 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 CDC23Q9UJX2 597 aa18.9■□□□□ 0.62
CTSB-228ENST00000533455 MYH8P13535 1937 aa18.89■□□□□ 0.61
CTSB-228ENST00000533455 MYH13Q9UKX3 1938 aa18.89■□□□□ 0.61
CTSB-228ENST00000533455 MAP2K7O14733 419 aa18.89■□□□□ 0.61
CTSB-228ENST00000533455 KIF5CO60282 957 aa18.89■□□□□ 0.61
CTSB-228ENST00000533455 TUBB4BP68371 445 aa18.89■□□□□ 0.61
CTSB-228ENST00000533455 SEC23AQ15436 765 aa18.89■□□□□ 0.61
CTSB-228ENST00000533455 LONRF2Q1L5Z9 754 aa18.89■□□□□ 0.61
CTSB-228ENST00000533455 FERMT2Q96AC1 680 aa18.89■□□□□ 0.61
CTSB-228ENST00000533455 TOMM22Q9NS69 142 aa18.89■□□□□ 0.61
CTSB-228ENST00000533455 SLIT2O94813 1529 aa18.89■□□□□ 0.61
CTSB-228ENST00000533455 ERVV-1B6SEH8 477 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 CYP19A1P11511 503 aaPredicted RBP18.88■□□□□ 0.61
CTSB-228ENST00000533455 XBP1P17861 261 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 HNRNPH2P55795 449 aaKnown RBP18.88■□□□□ 0.61
CTSB-228ENST00000533455 FILIP1LQ4L180 1135 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 CMTR1Q8N1G2 835 aaKnown RBP18.88■□□□□ 0.61
CTSB-228ENST00000533455 MSANTD4Q8NCY6 345 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 HELBQ8NG08 1087 aaPredicted RBP18.88■□□□□ 0.61
CTSB-228ENST00000533455 PHF20Q9BVI0 1012 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 RAB21Q9UL25 225 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 PPP1R3GB7ZBB8 358 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 TULP2O00295 520 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 KRT2P35908 639 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 USP5P45974 858 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 PPARAQ07869 468 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 MUM1L1Q5H9M0 696 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 CNGA4Q8IV77 575 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 CCDC82Q8N4S0 544 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 MSL3Q8N5Y2 521 aaKnown RBP18.88■□□□□ 0.61
CTSB-228ENST00000533455 NUP133Q8WUM0 1156 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 UBAC1Q9BSL1 405 aa18.88■□□□□ 0.61
CTSB-228ENST00000533455 IRX2Q9BZI1 471 aaPredicted RBP18.88■□□□□ 0.61
CTSB-228ENST00000533455 ATP2B1P20020 1258 aa18.87■□□□□ 0.61
CTSB-228ENST00000533455 GPS2Q13227 327 aa18.87■□□□□ 0.61
CTSB-228ENST00000533455 PKN1Q16512 942 aa18.87■□□□□ 0.61
CTSB-228ENST00000533455 BRINP3Q76B58 766 aa18.87■□□□□ 0.61
CTSB-228ENST00000533455 EPSTI1Q96J88 318 aa18.87■□□□□ 0.61
CTSB-228ENST00000533455 LZTFL1Q9NQ48 299 aa18.87■□□□□ 0.61
CTSB-228ENST00000533455 PSD3Q9NYI0 1048 aa18.87■□□□□ 0.61
CTSB-228ENST00000533455 ANAPC4Q9UJX5 808 aa18.87■□□□□ 0.61
CTSB-228ENST00000533455 TTF2Q9UNY4 1162 aaKnown RBP18.87■□□□□ 0.61
CTSB-228ENST00000533455 DUOX1Q9NRD9 1551 aa18.87■□□□□ 0.61
CTSB-228ENST00000533455 STRCQ7RTU9 1775 aa18.87■□□□□ 0.61
CTSB-228ENST00000533455 FAM205CA6NFA0 338 aa18.86■□□□□ 0.61
CTSB-228ENST00000533455 ST5P78524 1137 aa18.86■□□□□ 0.61
CTSB-228ENST00000533455 FUT2Q10981 343 aa18.86■□□□□ 0.61
CTSB-228ENST00000533455 ZNF34Q8IZ26 560 aa18.86■□□□□ 0.61
CTSB-228ENST00000533455 SYMPKQ92797 1274 aaKnown RBP18.86■□□□□ 0.61
CTSB-228ENST00000533455 ANKZF1Q9H8Y5 726 aa18.86■□□□□ 0.61
CTSB-228ENST00000533455 LAMB2P55268 1798 aa18.86■□□□□ 0.61
CTSB-228ENST00000533455 PRPF3O43395 683 aaKnown RBP18.86■□□□□ 0.61
CTSB-228ENST00000533455 AFMP43652 599 aa18.86■□□□□ 0.61
CTSB-228ENST00000533455 STX17P56962 302 aa18.86■□□□□ 0.61
CTSB-228ENST00000533455 AKAP17AQ02040 695 aaKnown RBP18.86■□□□□ 0.61
CTSB-228ENST00000533455 KLHL10Q6JEL2 608 aa18.86■□□□□ 0.61
CTSB-228ENST00000533455 DISP2A7MBM2 1401 aa18.86■□□□□ 0.61
CTSB-228ENST00000533455 TNKSO95271 1327 aa18.85■□□□□ 0.61
CTSB-228ENST00000533455 ZNF335Q9H4Z2 1342 aaPredicted RBP18.85■□□□□ 0.61
CTSB-228ENST00000533455 GYPCP04921 128 aa18.85■□□□□ 0.61
CTSB-228ENST00000533455 NEK11Q8NG66 645 aa18.85■□□□□ 0.61
CTSB-228ENST00000533455 TNFRSF25Q93038 417 aa18.85■□□□□ 0.61
CTSB-228ENST00000533455 LIMA1Q9UHB6 759 aaKnown RBP18.85■□□□□ 0.61
CTSB-228ENST00000533455 ZBTB1Q9Y2K1 713 aa18.85■□□□□ 0.61
CTSB-228ENST00000533455 SOS2Q07890 1332 aaPredicted RBP18.85■□□□□ 0.61
CTSB-228ENST00000533455 CASP14P31944 242 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 EARS2Q5JPH6 523 aaKnown RBP18.84■□□□□ 0.61
CTSB-228ENST00000533455 TMTC1Q8IUR5 882 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 ESR2Q92731 530 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 EXOC4Q96A65 974 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 SLC4A9Q96Q91 983 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 ZCCHC17Q9NP64 241 aaKnown RBP18.84■□□□□ 0.61
CTSB-228ENST00000533455 VPS54Q9P1Q0 977 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 PHLPP1O60346 1717 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 A0A0U1RQJ8 604 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms