RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 SWAP70Q9UH65 585 aa13.71□□□□□ -0.21
UBASH3B-208ENST00000533451 A0A0D9SFI3 127 aa13.7□□□□□ -0.22
UBASH3B-208ENST00000533451 PDE4AP27815 886 aa13.7□□□□□ -0.22
UBASH3B-208ENST00000533451 JAG1P78504 1218 aa13.7□□□□□ -0.22
UBASH3B-208ENST00000533451 NMIQ13287 307 aaPredicted RBP13.7□□□□□ -0.22
UBASH3B-208ENST00000533451 METTL16Q86W50 562 aaKnown RBP13.7□□□□□ -0.22
UBASH3B-208ENST00000533451 SMCR8Q8TEV9 937 aaPredicted RBP13.7□□□□□ -0.22
UBASH3B-208ENST00000533451 CCDC136Q96JN2 1154 aa13.7□□□□□ -0.22
UBASH3B-208ENST00000533451 FAM227BQ96M60 508 aa13.7□□□□□ -0.22
UBASH3B-208ENST00000533451 HELLSQ9NRZ9 838 aa13.7□□□□□ -0.22
UBASH3B-208ENST00000533451 GINM1Q9NU53 330 aa13.7□□□□□ -0.22
UBASH3B-208ENST00000533451 LOC285556D6RIA3 1793 aa13.69□□□□□ -0.22
UBASH3B-208ENST00000533451 SMIM22K7EJ46 135 aa13.69□□□□□ -0.22
UBASH3B-208ENST00000533451 CYP2C8P10632 490 aa13.69□□□□□ -0.22
UBASH3B-208ENST00000533451 CDK8P49336 464 aa13.69□□□□□ -0.22
UBASH3B-208ENST00000533451 ATP2B2Q01814 1243 aa13.69□□□□□ -0.22
UBASH3B-208ENST00000533451 TATDN1Q6P1N9 297 aa13.69□□□□□ -0.22
UBASH3B-208ENST00000533451 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
UBASH3B-208ENST00000533451 MKNK2Q9HBH9 465 aa13.69□□□□□ -0.22
UBASH3B-208ENST00000533451 EPB41L4AQ9HCS5 686 aaPredicted RBP13.69□□□□□ -0.22
UBASH3B-208ENST00000533451 CPA4Q9UI42 421 aa13.69□□□□□ -0.22
UBASH3B-208ENST00000533451 PATL2C9JE40 543 aaKnown RBP13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 USP17L10C9JJH3 530 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 RAD21O60216 631 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 SLC3A2P08195 630 aaKnown RBP13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 SDSP20132 328 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 BACE1P56817 501 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 SP3Q02447 781 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 GABPAQ06546 454 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 MOGSQ13724 837 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 KIF22Q14807 665 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 SEPT2Q15019 361 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 MCMDC2Q4G0Z9 681 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 TREML2Q5T2D2 321 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 TTC22Q5TAA0 569 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 GIMAP6Q6P9H5 292 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 CWC27Q6UX04 472 aaKnown RBP13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 CENPQQ7L2Z9 268 aaPredicted RBP13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 CTU1Q7Z7A3 348 aaKnown RBP13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 IFNL3Q8IZI9 196 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 PROCA1Q8NCQ7 364 aaPredicted RBP13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 CD99L2Q8TCZ2 262 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 WDR18Q9BV38 432 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 CFHR5Q9BXR6 569 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 MCOLN1Q9GZU1 580 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 ZCCHC17Q9NP64 241 aaKnown RBP13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 AGTPBP1Q9UPW5 1226 aa13.68□□□□□ -0.22
UBASH3B-208ENST00000533451 HIP1O00291 1037 aa13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 TLR2O60603 784 aa13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 AKR1B1P15121 316 aa13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 MFAP1P55081 439 aaKnown RBP13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 IRX3P78415 501 aaPredicted RBP13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 GPAT2Q6NUI2 795 aa13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 TMEM179Q6ZVK1 233 aa13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 C16orf86Q6ZW13 317 aa13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 CLEC10AQ8IUN9 316 aa13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 PNMA3Q9UL41 463 aa13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 TRPC6Q9Y210 931 aa13.67□□□□□ -0.22
UBASH3B-208ENST00000533451 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 C19orf81C9J6K1 198 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 PRDM1O75626 825 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 OSBPP22059 807 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 USP14P54578 494 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 ICA1Q05084 483 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 SBK1Q52WX2 424 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 VPS53Q5VIR6 699 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 USP17L2Q6R6M4 530 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 ZNF287Q9HBT7 754 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 CIZ1Q9ULV3 898 aaPredicted RBP13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 TRIM17Q9Y577 477 aa13.66□□□□□ -0.22
UBASH3B-208ENST00000533451 ATMINO43313 823 aaPredicted RBP13.65□□□□□ -0.22
UBASH3B-208ENST00000533451 PDE4BQ07343 736 aa13.65□□□□□ -0.22
UBASH3B-208ENST00000533451 PPARAQ07869 468 aa13.65□□□□□ -0.22
UBASH3B-208ENST00000533451 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
UBASH3B-208ENST00000533451 ASTLQ6HA08 431 aaPredicted RBP13.65□□□□□ -0.22
UBASH3B-208ENST00000533451 ZNF589Q86UQ0 364 aaPredicted RBP13.65□□□□□ -0.22
UBASH3B-208ENST00000533451 ACER1Q8TDN7 264 aa13.65□□□□□ -0.22
UBASH3B-208ENST00000533451 CCDC17Q96LX7 622 aa13.65□□□□□ -0.22
UBASH3B-208ENST00000533451 ARHGEF10LQ9HCE6 1279 aa13.65□□□□□ -0.22
UBASH3B-208ENST00000533451 TAOK2Q9UL54 1235 aa13.65□□□□□ -0.22
UBASH3B-208ENST00000533451 ZSWIM8A7E2V4 1837 aa13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 GSPT1P15170 499 aaKnown RBP13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 GUCY1A2P33402 732 aa13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 CTDSPL2Q05D32 466 aa13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 ARHGEF6Q15052 776 aa13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 TICAM2Q86XR7 235 aa13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 ZNF444Q8N0Y2 327 aaPredicted RBP13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 ABHD8Q96I13 439 aa13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 EFCC1Q9HA90 598 aa13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 SLC45A1Q9Y2W3 748 aa13.64□□□□□ -0.23
UBASH3B-208ENST00000533451 CCDC85CA6NKD9 419 aa13.63□□□□□ -0.23
UBASH3B-208ENST00000533451 FMNL1O95466 1100 aaPredicted RBP13.63□□□□□ -0.23
UBASH3B-208ENST00000533451 TSPY3P0CV98 308 aa13.63□□□□□ -0.23
UBASH3B-208ENST00000533451 TSPY8P0CW00 308 aa13.63□□□□□ -0.23
UBASH3B-208ENST00000533451 RASA1P20936 1047 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms