RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 KIF4BQ2VIQ3 1234 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 TBC1D10BQ4KMP7 808 aaPredicted RBP14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 RCSD1Q6JBY9 416 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 TATDN1Q6P1N9 297 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 SAMD7Q7Z3H4 446 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 NSUN7Q8NE18 718 aaKnown RBP14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 CSRNP1Q96S65 589 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 MAP3K14Q99558 947 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 KAT14Q9H8E8 782 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 KIF3AQ9Y496 699 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 NAV1Q8NEY1 1877 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 CNTNAP1P78357 1384 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 FOCADQ5VW36 1801 aa14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 GOLGA8AA7E2F4 631 aa14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 DDAH1O94760 285 aa14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 CTDNEP1O95476 244 aa14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 ADD1P35611 737 aaKnown RBP14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 CERKLQ49MI3 558 aaPredicted RBP14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 ZC3H4Q9UPT8 1303 aaKnown RBP14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 NID2Q14112 1375 aa14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 DDX60LQ5H9U9 1706 aaKnown RBP14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 LAMB1P07942 1786 aa14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 ADAMTSL1Q8N6G6 1762 aa14.32□□□□□ -0.12
TGFBR3-211ENST00000533370 CDK5RAP2Q96SN8 1893 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 JAK2O60674 1132 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 DDNO94850 711 aaPredicted RBP14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 EGFRP00533 1210 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 SYT1P21579 422 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 LMOD1P29536 600 aaPredicted RBP14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 EPS15P42566 896 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 MAP3K10Q02779 954 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 TROAPQ12815 778 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 RASA3Q14644 834 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 RTN1Q16799 776 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 LARP1BQ659C4 914 aaKnown RBP14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 MICU3Q86XE3 530 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 FAM184AQ8NB25 1140 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 FAM217BQ9NTX9 383 aaPredicted RBP14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 RBM28Q9NW13 759 aaKnown RBP14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 MTMR4Q9NYA4 1195 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 PGAP2Q9UHJ9 254 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 WDR33Q9C0J8 1336 aaKnown RBP14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 MYH1P12882 1939 aa14.31□□□□□ -0.12
TGFBR3-211ENST00000533370 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 IGKV6D-41A0A0C4DH26 115 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 PTPDC1A2A3K4 754 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 STX6O43752 255 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 GTPBP6O43824 516 aaPredicted RBP14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 BRD1O95696 1058 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 TOP1P11387 765 aaKnown RBP14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 AKR1B1P15121 316 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 CDC27P30260 824 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 RAB11FIP4Q86YS3 637 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 RGS22Q8NE09 1264 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 NUP133Q8WUM0 1156 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 ZFP91Q96JP5 570 aaPredicted RBP14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 TMEM47Q9BQJ4 181 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 MYL10Q9BUA6 226 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 TMEM39BQ9GZU3 492 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 DNAJC18Q9H819 358 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 ADARB2Q9NS39 739 aaKnown RBP14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 HACL1Q9UJ83 578 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 PLIN4Q96Q06 1357 aa14.3□□□□□ -0.12
TGFBR3-211ENST00000533370 ECM29Q5VYK3 1845 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 MPHOSPH10O00566 681 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 IFNAR1P17181 557 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 KIF5BP33176 963 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 NTRK3Q16288 839 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 APOBEC3FQ8IUX4 373 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 CCDC144CPQ8IYA2 1237 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 PNMA1Q8ND90 353 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 CTCFLQ8NI51 663 aaPredicted RBP14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 HOOK2Q96ED9 719 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 DDX11Q96FC9 970 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 CEP95Q96GE4 821 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 L3MBTL3Q96JM7 780 aaPredicted RBP14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 DEFB129Q9H1M3 183 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 KANSL2Q9H9L4 492 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 STX8Q9UNK0 236 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 ZDHHC9Q9Y397 364 aa14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 FARP1Q9Y4F1 1045 aaPredicted RBP14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 DICER1Q9UPY3 1922 aaKnown RBP14.29□□□□□ -0.12
TGFBR3-211ENST00000533370 SBF1O95248 1867 aa14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 TTLL1O95922 423 aa14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 RXRAP19793 462 aa14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 SSRP1Q08945 709 aaKnown RBP14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 ABCB5Q2M3G0 1257 aa14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 CLEC17AQ6ZS10 378 aa14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 TMEM179Q6ZVK1 233 aa14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 TNPO1Q92973 898 aaKnown RBP14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 MKL1Q969V6 931 aa14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 TEPSINQ96N21 525 aa14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 CABP5Q9NP86 173 aa14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 ORC3Q9UBD5 711 aaPredicted RBP14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 CLIP2Q9UDT6 1046 aa14.28□□□□□ -0.12
TGFBR3-211ENST00000533370 FAM196BA6NMK8 535 aa14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 FMNL1O95466 1100 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms