RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-208ENST00000533361 HIP1O00291 1037 aa26.57■■□□□ 1.84
SIPA1-208ENST00000533361 GUCY1A2P33402 732 aa26.57■■□□□ 1.84
SIPA1-208ENST00000533361 SMCR8Q8TEV9 937 aaPredicted RBP26.57■■□□□ 1.84
SIPA1-208ENST00000533361 PNMA3Q9UL41 463 aa26.57■■□□□ 1.84
SIPA1-208ENST00000533361 SLC3A2P08195 630 aaKnown RBP26.56■■□□□ 1.84
SIPA1-208ENST00000533361 OSBPP22059 807 aa26.56■■□□□ 1.84
SIPA1-208ENST00000533361 VPS53Q5VIR6 699 aa26.56■■□□□ 1.84
SIPA1-208ENST00000533361 CWC27Q6UX04 472 aaKnown RBP26.56■■□□□ 1.84
SIPA1-208ENST00000533361 ACER1Q8TDN7 264 aa26.56■■□□□ 1.84
SIPA1-208ENST00000533361 CCDC136Q96JN2 1154 aa26.56■■□□□ 1.84
SIPA1-208ENST00000533361 ZNF287Q9HBT7 754 aa26.56■■□□□ 1.84
SIPA1-208ENST00000533361 MYH8P13535 1937 aa26.56■■□□□ 1.84
SIPA1-208ENST00000533361 ECM2O94769 699 aaPredicted RBP26.55■■□□□ 1.84
SIPA1-208ENST00000533361 RGS19P49795 217 aa26.55■■□□□ 1.84
SIPA1-208ENST00000533361 USP14P54578 494 aa26.55■■□□□ 1.84
SIPA1-208ENST00000533361 MFAP1P55081 439 aaKnown RBP26.55■■□□□ 1.84
SIPA1-208ENST00000533361 KIF22Q14807 665 aa26.55■■□□□ 1.84
SIPA1-208ENST00000533361 C17orf99Q6UX52 265 aa26.55■■□□□ 1.84
SIPA1-208ENST00000533361 GSPT1P15170 499 aaKnown RBP26.54■■□□□ 1.84
SIPA1-208ENST00000533361 MLLT1Q03111 559 aaPredicted RBP26.54■■□□□ 1.84
SIPA1-208ENST00000533361 PPARAQ07869 468 aa26.54■■□□□ 1.84
SIPA1-208ENST00000533361 ARHGEF6Q15052 776 aa26.54■■□□□ 1.84
SIPA1-208ENST00000533361 EMILIN3Q9NT22 766 aa26.54■■□□□ 1.84
SIPA1-208ENST00000533361 TRIM17Q9Y577 477 aa26.54■■□□□ 1.84
SIPA1-208ENST00000533361 CCDC171Q6TFL3 1326 aa26.54■■□□□ 1.84
SIPA1-208ENST00000533361 SLC34A2O95436 690 aa26.53■■□□□ 1.84
SIPA1-208ENST00000533361 IRX3P78415 501 aaPredicted RBP26.53■■□□□ 1.84
SIPA1-208ENST00000533361 ATP2B2Q01814 1243 aa26.53■■□□□ 1.84
SIPA1-208ENST00000533361 ZNF589Q86UQ0 364 aaPredicted RBP26.53■■□□□ 1.84
SIPA1-208ENST00000533361 ZNF444Q8N0Y2 327 aaPredicted RBP26.53■■□□□ 1.84
SIPA1-208ENST00000533361 EFCC1Q9HA90 598 aa26.53■■□□□ 1.84
SIPA1-208ENST00000533361 ARHGEF10LQ9HCE6 1279 aa26.53■■□□□ 1.84
SIPA1-208ENST00000533361 PRDM1O75626 825 aa26.52■■□□□ 1.84
SIPA1-208ENST00000533361 ICA1Q05084 483 aa26.52■■□□□ 1.84
SIPA1-208ENST00000533361 PDE4BQ07343 736 aa26.52■■□□□ 1.84
SIPA1-208ENST00000533361 ROBO3Q96MS0 1386 aa26.52■■□□□ 1.84
SIPA1-208ENST00000533361 KIAA1683Q9H0B3 1180 aa26.52■■□□□ 1.84
SIPA1-208ENST00000533361 ADGRA2Q96PE1 1338 aa26.51■■□□□ 1.83
SIPA1-208ENST00000533361 FOXP2O15409 715 aa26.51■■□□□ 1.83
SIPA1-208ENST00000533361 HSPD1P10809 573 aaKnown RBP26.51■■□□□ 1.83
SIPA1-208ENST00000533361 RASA1P20936 1047 aa26.51■■□□□ 1.83
SIPA1-208ENST00000533361 PKN2Q16513 984 aaKnown RBP26.51■■□□□ 1.83
SIPA1-208ENST00000533361 CLEC10AQ8IUN9 316 aa26.51■■□□□ 1.83
SIPA1-208ENST00000533361 ASCC2Q9H1I8 757 aaPredicted RBP26.51■■□□□ 1.83
SIPA1-208ENST00000533361 LOC285556D6RIA3 1793 aa26.51■■□□□ 1.83
SIPA1-208ENST00000533361 CTDSPL2Q05D32 466 aa26.5■■□□□ 1.83
SIPA1-208ENST00000533361 ALX1Q15699 326 aa26.5■■□□□ 1.83
SIPA1-208ENST00000533361 OTOP1Q7RTM1 612 aa26.5■■□□□ 1.83
SIPA1-208ENST00000533361 KANSL2Q9H9L4 492 aa26.5■■□□□ 1.83
SIPA1-208ENST00000533361 A0A1W2PRG0 241 aa26.49■■□□□ 1.83
SIPA1-208ENST00000533361 HOXA7P31268 230 aaPredicted RBP26.49■■□□□ 1.83
SIPA1-208ENST00000533361 LACTBP83111 547 aaPredicted RBP26.49■■□□□ 1.83
SIPA1-208ENST00000533361 C12orf42Q96LP6 360 aa26.49■■□□□ 1.83
SIPA1-208ENST00000533361 SH2D4AQ9H788 454 aa26.49■■□□□ 1.83
SIPA1-208ENST00000533361 FGAP02671 866 aa26.48■■□□□ 1.83
SIPA1-208ENST00000533361 BCRP11274 1271 aa26.48■■□□□ 1.83
SIPA1-208ENST00000533361 ANKRD13CQ8N6S4 541 aa26.48■■□□□ 1.83
SIPA1-208ENST00000533361 ARHGAP39Q9C0H5 1083 aa26.48■■□□□ 1.83
SIPA1-208ENST00000533361 USP17L15C9J2P7 530 aa26.47■■□□□ 1.83
SIPA1-208ENST00000533361 USP17L13C9JLJ4 530 aa26.47■■□□□ 1.83
SIPA1-208ENST00000533361 USP17L11C9JVI0 530 aa26.47■■□□□ 1.83
SIPA1-208ENST00000533361 USP17L18D6R9N7 530 aa26.47■■□□□ 1.83
SIPA1-208ENST00000533361 USP17L22D6RA61 530 aa26.47■■□□□ 1.83
SIPA1-208ENST00000533361 USP17L17D6RBQ6 530 aa26.47■■□□□ 1.83
SIPA1-208ENST00000533361 USP17L19D6RCP7 530 aa26.47■■□□□ 1.83
SIPA1-208ENST00000533361 USP17L20D6RJB6 530 aa26.47■■□□□ 1.83
SIPA1-208ENST00000533361 FMNL1O95466 1100 aaPredicted RBP26.47■■□□□ 1.83
SIPA1-208ENST00000533361 EEF2P13639 858 aaKnown RBP26.47■■□□□ 1.83
SIPA1-208ENST00000533361 GCLCP48506 637 aaPredicted RBP26.47■■□□□ 1.83
SIPA1-208ENST00000533361 USP17L24Q0WX57 530 aa26.47■■□□□ 1.83
SIPA1-208ENST00000533361 FBXO46Q6PJ61 603 aaPredicted RBP26.47■■□□□ 1.83
SIPA1-208ENST00000533361 P2RX7Q99572 595 aaKnown RBP26.47■■□□□ 1.83
SIPA1-208ENST00000533361 RAD21O60216 631 aa26.46■■□□□ 1.83
SIPA1-208ENST00000533361 TSPY3P0CV98 308 aa26.46■■□□□ 1.83
SIPA1-208ENST00000533361 TSPY8P0CW00 308 aa26.46■■□□□ 1.83
SIPA1-208ENST00000533361 VCAM1P19320 739 aa26.46■■□□□ 1.83
SIPA1-208ENST00000533361 PSMC4P43686 418 aa26.46■■□□□ 1.83
SIPA1-208ENST00000533361 SIAH1Q8IUQ4 282 aa26.46■■□□□ 1.83
SIPA1-208ENST00000533361 CAP1Q01518 475 aa26.45■■□□□ 1.82
SIPA1-208ENST00000533361 FAM47AQ5JRC9 791 aa26.45■■□□□ 1.82
SIPA1-208ENST00000533361 SKAP1Q86WV1 359 aa26.45■■□□□ 1.82
SIPA1-208ENST00000533361 RUFY2Q8WXA3 655 aa26.45■■□□□ 1.82
SIPA1-208ENST00000533361 RPAP3Q9H6T3 665 aaPredicted RBP26.45■■□□□ 1.82
SIPA1-208ENST00000533361 TOMM22Q9NS69 142 aa26.45■■□□□ 1.82
SIPA1-208ENST00000533361 TMX2Q9Y320 296 aa26.45■■□□□ 1.82
SIPA1-208ENST00000533361 HERVK_113P62684 666 aa26.44■■□□□ 1.82
SIPA1-208ENST00000533361 TFAP4Q01664 338 aa26.44■■□□□ 1.82
SIPA1-208ENST00000533361 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.44■■□□□ 1.82
SIPA1-208ENST00000533361 INCENPQ9NQS7 918 aa26.44■■□□□ 1.82
SIPA1-208ENST00000533361 ANAPC4Q9UJX5 808 aa26.44■■□□□ 1.82
SIPA1-208ENST00000533361 PTPN22Q9Y2R2 807 aa26.44■■□□□ 1.82
SIPA1-208ENST00000533361 TNRC18O15417 2968 aaPredicted RBP26.43■■□□□ 1.82
SIPA1-208ENST00000533361 CHMLP26374 656 aa26.43■■□□□ 1.82
SIPA1-208ENST00000533361 FCGRTP55899 365 aa26.43■■□□□ 1.82
SIPA1-208ENST00000533361 HAND2P61296 217 aa26.43■■□□□ 1.82
SIPA1-208ENST00000533361 CATSPERGQ6ZRH7 1159 aa26.43■■□□□ 1.82
SIPA1-208ENST00000533361 SPICE1Q8N0Z3 855 aa26.43■■□□□ 1.82
SIPA1-208ENST00000533361 HPS5Q9UPZ3 1129 aa26.43■■□□□ 1.82
SIPA1-208ENST00000533361 HOXD10P28358 340 aa26.42■■□□□ 1.82
SIPA1-208ENST00000533361 FAM110CQ1W6H9 321 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms