RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 VEGFBP49765 207 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 ATP2B2Q01814 1243 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 PPIL2Q13356 520 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 MTMR2Q13614 643 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 ZYXQ15942 572 aaKnown RBP9.33□□□□□ -0.92
COMMD9-207ENST00000533308 KIAA1755Q5JYT7 1200 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 TMEM179Q6ZVK1 233 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 ERO1BQ86YB8 467 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 ZNF444Q8N0Y2 327 aaPredicted RBP9.33□□□□□ -0.92
COMMD9-207ENST00000533308 LRRC47Q8N1G4 583 aaKnown RBP9.33□□□□□ -0.92
COMMD9-207ENST00000533308 NEDD1Q8NHV4 660 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 SLC10A4Q96EP9 437 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 LRRC2Q9BYS8 371 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 RNF41Q9H4P4 317 aaPredicted RBP9.33□□□□□ -0.92
COMMD9-207ENST00000533308 ZSWIM5Q9P217 1185 aa9.33□□□□□ -0.92
COMMD9-207ENST00000533308 PPATQ06203 517 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 SPP2Q13103 211 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 MOGSQ13724 837 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 DEFB115Q30KQ5 88 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 RCSD1Q6JBY9 416 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 NCOA7Q8NI08 942 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 HHIPL1Q96JK4 782 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 MS4A4AQ96JQ5 239 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 CCDC17Q96LX7 622 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 JAKMIP1Q96N16 626 aaKnown RBP9.32□□□□□ -0.92
COMMD9-207ENST00000533308 CABP5Q9NP86 173 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 AFG3L2Q9Y4W6 797 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 RLFQ13129 1914 aa9.32□□□□□ -0.92
COMMD9-207ENST00000533308 TNKSO95271 1327 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 WDR33Q9C0J8 1336 aaKnown RBP9.31□□□□□ -0.92
COMMD9-207ENST00000533308 A0A0G2JMZ2 1700 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 PCP11498 1178 aaKnown RBP9.31□□□□□ -0.92
COMMD9-207ENST00000533308 HMGCS2P54868 508 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 KIF23Q02241 960 aaPredicted RBP9.31□□□□□ -0.92
COMMD9-207ENST00000533308 SEC23AQ15436 765 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 TSGA10IPQ3SY00 556 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 TREML2Q5T2D2 321 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 RNF20Q5VTR2 975 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 RALYLQ86SE5 291 aaKnown RBP9.31□□□□□ -0.92
COMMD9-207ENST00000533308 ENAHQ8N8S7 591 aaPredicted RBP9.31□□□□□ -0.92
COMMD9-207ENST00000533308 ZNF280CQ8ND82 737 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 BRI3BPQ8WY22 251 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 ESR2Q92731 530 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 NEK1Q96PY6 1258 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 NUP88Q99567 741 aaPredicted RBP9.31□□□□□ -0.92
COMMD9-207ENST00000533308 KIF2CQ99661 725 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 FEZ1Q99689 392 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 WDR18Q9BV38 432 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 UPF3BQ9BZI7 483 aaKnown RBP9.31□□□□□ -0.92
COMMD9-207ENST00000533308 KRT23Q9C075 422 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 CNNM2Q9H8M5 875 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 ZNF287Q9HBT7 754 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 MTMR4Q9NYA4 1195 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 TAOK2Q9UL54 1235 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 STX8Q9UNK0 236 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 KCNH4Q9UQ05 1017 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 MTMR7Q9Y216 660 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 ZSWIM8A7E2V4 1837 aa9.31□□□□□ -0.92
COMMD9-207ENST00000533308 CCL15-CCL14A0A0B4J2E2 113 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 A0A0G2JLL6 359 aaPredicted RBP9.3□□□□□ -0.92
COMMD9-207ENST00000533308 UNCXA6NJT0 531 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 IGF2BP3O00425 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
COMMD9-207ENST00000533308 EPB41L2O43491 1005 aaKnown RBP9.3□□□□□ -0.92
COMMD9-207ENST00000533308 PRC1O43663 620 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 ZBTB48P10074 688 aaPredicted RBP9.3□□□□□ -0.92
COMMD9-207ENST00000533308 ZKSCAN1P17029 563 aaPredicted RBP9.3□□□□□ -0.92
COMMD9-207ENST00000533308 CASTP20810 708 aaKnown RBP9.3□□□□□ -0.92
COMMD9-207ENST00000533308 MCCP23508 829 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 NOVP48745 357 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 TRDNQ13061 729 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 CCL15Q16663 113 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 GADL1Q6ZQY3 521 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 PRRT2Q7Z6L0 340 aaPredicted RBP9.3□□□□□ -0.92
COMMD9-207ENST00000533308 RAB11FIP4Q86YS3 637 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 SPICE1Q8N0Z3 855 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 DNAJC5GQ8N7S2 189 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 ZSCAN10Q96SZ4 725 aaPredicted RBP9.3□□□□□ -0.92
COMMD9-207ENST00000533308 PTPN18Q99952 460 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 C22orf23Q9BZE7 217 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 EMILIN3Q9NT22 766 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 GINM1Q9NU53 330 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 CLIP2Q9UDT6 1046 aa9.3□□□□□ -0.92
COMMD9-207ENST00000533308 COL11A1P12107 1806 aaPredicted RBP9.3□□□□□ -0.92
COMMD9-207ENST00000533308 CEP350Q5VT06 3117 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 SH2B2O14492 632 aaPredicted RBP9.29□□□□□ -0.92
COMMD9-207ENST00000533308 RAD21O60216 631 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 TTLL1O95922 423 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 VCAM1P19320 739 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 RPS6KB1P23443 525 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 BACE1P56817 501 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 EXOSC10Q01780 885 aaKnown RBP9.29□□□□□ -0.92
COMMD9-207ENST00000533308 GPAT2Q6NUI2 795 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 FAM43AQ8N2R8 423 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 IGDCC4Q8TDY8 1250 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 CCDC102AQ96A19 550 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 TBC1D32Q96NH3 1257 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 TMEM47Q9BQJ4 181 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 LARP6Q9BRS8 491 aaKnown RBP9.29□□□□□ -0.92
COMMD9-207ENST00000533308 UBAC1Q9BSL1 405 aa9.29□□□□□ -0.92
COMMD9-207ENST00000533308 MYL10Q9BUA6 226 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms