RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 CERS3Q8IU89 383 aa12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 TEX11Q8IYF3 940 aa12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 MAGEB6Q8N7X4 407 aa12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 SH3RF3Q8TEJ3 882 aaPredicted RBP12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 SENP6Q9GZR1 1112 aaPredicted RBP12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 BOLA2Q9H3K6 86 aa12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 HCN4Q9Y3Q4 1203 aa12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 SUPT16HQ9Y5B9 1047 aaKnown RBP12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 ATRNL1Q5VV63 1379 aa12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 DDTLA6NHG4 134 aaPredicted RBP12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 MSCO60682 206 aa12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 MRPS5P82675 430 aaKnown RBP12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 HAUS7Q99871 368 aa12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 OSBPL5Q9H0X9 879 aaPredicted RBP12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 ECHDC1Q9NTX5 307 aa12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 PAG1Q9NWQ8 432 aa12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 BDP1A6H8Y1 2624 aa12.32□□□□□ -0.44
CHMP4A-206ENST00000533011 PIEZO1Q92508 2521 aa12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 ZKSCAN1P17029 563 aaPredicted RBP12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 CYP2B6P20813 491 aa12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 DYNLL1P63167 89 aaKnown RBP12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 CACNB2Q08289 660 aaPredicted RBP12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 HDAC1Q13547 482 aaPredicted RBP12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 SLC9C2Q5TAH2 1124 aa12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 MIGA1Q8NAN2 632 aa12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 TGFBRAP1Q8WUH2 860 aa12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 DHX36Q9H2U1 1008 aaKnown RBP12.31□□□□□ -0.44
CHMP4A-206ENST00000533011 TRIM75PA6NK02 468 aa12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 TBC1D12O60347 775 aa12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 PDE6AP16499 860 aa12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 EXOC6Q8TAG9 804 aa12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 ADAMTS19Q8TE59 1207 aa12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 EDC3Q96F86 508 aaKnown RBP12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 UHRF1Q96T88 793 aaPredicted RBP12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 THEGQ9P2T0 379 aa12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 FOCADQ5VW36 1801 aa12.3□□□□□ -0.44
CHMP4A-206ENST00000533011 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 CDH23Q9H251 3354 aa12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 DNM1LO00429 736 aa12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 MAPK4P31152 587 aa12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 RGS2P41220 211 aa12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 LPAR1Q92633 364 aa12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 RWDD1Q9H446 243 aaPredicted RBP12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 PI4KBQ9UBF8 816 aa12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 FLT1P17948 1338 aa12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 ZNF532Q9HCE3 1301 aa12.29□□□□□ -0.44
CHMP4A-206ENST00000533011 MAGEB6P1A0A0J9YX57 407 aa12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 TCRBV5S4A2TA0A5A2 114 aa12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 USP5P45974 858 aa12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 C9orf50Q5SZB4 431 aa12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 TREML2Q5T2D2 321 aa12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 ANKRD45Q5TZF3 282 aa12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 FOXP4Q8IVH2 680 aaPredicted RBP12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 CCAR1Q8IX12 1150 aaKnown RBP12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 ARRDC4Q8NCT1 418 aa12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 GPRC5AQ8NFJ5 357 aa12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 GAS2L1Q99501 681 aaPredicted RBP12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 RIOK1Q9BRS2 568 aaKnown RBP12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 HERC5Q9UII4 1024 aaKnown RBP12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 TTC41PQ6P2S7 1318 aa12.28□□□□□ -0.44
CHMP4A-206ENST00000533011 ERC2O15083 957 aa12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 SLURP2P0DP57 97 aa12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 ADD2P35612 726 aa12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 RTP1P59025 263 aa12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 GRIN2CQ14957 1233 aa12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 MFSD14CQ5VZR4 134 aa12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 ZNF280CQ8ND82 737 aa12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 GTF3C2Q8WUA4 911 aaPredicted RBP12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 USP6NLQ92738 828 aa12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 ASCC2Q9H1I8 757 aaPredicted RBP12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 PALD1Q9ULE6 856 aa12.27□□□□□ -0.45
CHMP4A-206ENST00000533011 FAM196BA6NMK8 535 aa12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 GLRX3O76003 335 aaKnown RBP12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 HLA-DOAP06340 250 aa12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 UBE3CQ15386 1083 aa12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 SH3D19Q5HYK7 790 aa12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 C1orf53Q5VUE5 145 aa12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 METTL16Q86W50 562 aaKnown RBP12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 CRACR2BQ8N4Y2 399 aaPredicted RBP12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 USP38Q8NB14 1042 aa12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 BADQ92934 168 aa12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 CRNKL1Q9BZJ0 848 aaKnown RBP12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 ZNF576Q9H609 170 aa12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 DDX20Q9UHI6 824 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms