RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 GREB1LQ9C091 1923 aaPredicted RBP18.4■□□□□ 0.54
CPSF1-210ENST00000532935 DOCK3Q8IZD9 2030 aa18.39■□□□□ 0.53
CPSF1-210ENST00000532935 AKR1B1P15121 316 aa18.39■□□□□ 0.53
CPSF1-210ENST00000532935 TDO2P48775 406 aa18.39■□□□□ 0.53
CPSF1-210ENST00000532935 TMEM179Q6ZVK1 233 aa18.39■□□□□ 0.53
CPSF1-210ENST00000532935 TICAM2Q86XR7 235 aa18.39■□□□□ 0.53
CPSF1-210ENST00000532935 IFNL3Q8IZI9 196 aa18.39■□□□□ 0.53
CPSF1-210ENST00000532935 ACER1Q8TDN7 264 aa18.39■□□□□ 0.53
CPSF1-210ENST00000532935 ASCC2Q9H1I8 757 aaPredicted RBP18.39■□□□□ 0.53
CPSF1-210ENST00000532935 EMILIN3Q9NT22 766 aa18.39■□□□□ 0.53
CPSF1-210ENST00000532935 MINDY4BA8MYZ0 360 aa18.38■□□□□ 0.53
CPSF1-210ENST00000532935 CTGFP29279 349 aa18.38■□□□□ 0.53
CPSF1-210ENST00000532935 HOXA7P31268 230 aaPredicted RBP18.38■□□□□ 0.53
CPSF1-210ENST00000532935 USP14P54578 494 aa18.38■□□□□ 0.53
CPSF1-210ENST00000532935 ZYXQ15942 572 aaKnown RBP18.38■□□□□ 0.53
CPSF1-210ENST00000532935 CCDC129Q6ZRS4 1044 aa18.38■□□□□ 0.53
CPSF1-210ENST00000532935 RILPL2Q969X0 211 aa18.38■□□□□ 0.53
CPSF1-210ENST00000532935 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
CPSF1-210ENST00000532935 CCDC17Q96LX7 622 aa18.38■□□□□ 0.53
CPSF1-210ENST00000532935 NACAP1Q9BZK3 213 aa18.38■□□□□ 0.53
CPSF1-210ENST00000532935 KIAA1683Q9H0B3 1180 aa18.38■□□□□ 0.53
CPSF1-210ENST00000532935 ROBO3Q96MS0 1386 aa18.38■□□□□ 0.53
CPSF1-210ENST00000532935 ECM2O94769 699 aaPredicted RBP18.37■□□□□ 0.53
CPSF1-210ENST00000532935 GNRH1P01148 92 aa18.37■□□□□ 0.53
CPSF1-210ENST00000532935 PSMC4P43686 418 aa18.37■□□□□ 0.53
CPSF1-210ENST00000532935 IRX3P78415 501 aaPredicted RBP18.37■□□□□ 0.53
CPSF1-210ENST00000532935 HELLSQ9NRZ9 838 aa18.37■□□□□ 0.53
CPSF1-210ENST00000532935 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
CPSF1-210ENST00000532935 GCLCP48506 637 aaPredicted RBP18.36■□□□□ 0.53
CPSF1-210ENST00000532935 STK11IPQ8N1F8 1099 aa18.36■□□□□ 0.53
CPSF1-210ENST00000532935 ANKRD13CQ8N6S4 541 aa18.36■□□□□ 0.53
CPSF1-210ENST00000532935 TRIM47Q96LD4 638 aa18.36■□□□□ 0.53
CPSF1-210ENST00000532935 FAM227BQ96M60 508 aa18.36■□□□□ 0.53
CPSF1-210ENST00000532935 A0A0D9SFI3 127 aa18.35■□□□□ 0.53
CPSF1-210ENST00000532935 A0A1W2PRG0 241 aa18.35■□□□□ 0.53
CPSF1-210ENST00000532935 FMNL1O95466 1100 aaPredicted RBP18.35■□□□□ 0.53
CPSF1-210ENST00000532935 PDE4AP27815 886 aa18.35■□□□□ 0.53
CPSF1-210ENST00000532935 FAM110CQ1W6H9 321 aa18.35■□□□□ 0.53
CPSF1-210ENST00000532935 MCMDC2Q4G0Z9 681 aa18.35■□□□□ 0.53
CPSF1-210ENST00000532935 NAPBQ9H115 298 aa18.35■□□□□ 0.53
CPSF1-210ENST00000532935 MKNK2Q9HBH9 465 aa18.35■□□□□ 0.53
CPSF1-210ENST00000532935 FOXP2O15409 715 aa18.34■□□□□ 0.53
CPSF1-210ENST00000532935 VCAM1P19320 739 aa18.34■□□□□ 0.53
CPSF1-210ENST00000532935 PRMT2P55345 433 aa18.34■□□□□ 0.53
CPSF1-210ENST00000532935 FCGRTP55899 365 aa18.34■□□□□ 0.53
CPSF1-210ENST00000532935 HERVK_113P62684 666 aa18.34■□□□□ 0.53
CPSF1-210ENST00000532935 ICA1Q05084 483 aa18.34■□□□□ 0.53
CPSF1-210ENST00000532935 NMIQ13287 307 aaPredicted RBP18.34■□□□□ 0.53
CPSF1-210ENST00000532935 CLEC10AQ8IUN9 316 aa18.34■□□□□ 0.53
CPSF1-210ENST00000532935 P2RX7Q99572 595 aaKnown RBP18.34■□□□□ 0.53
CPSF1-210ENST00000532935 ARHGEF10LQ9HCE6 1279 aa18.34■□□□□ 0.53
CPSF1-210ENST00000532935 PTCH2Q9Y6C5 1203 aa18.34■□□□□ 0.53
CPSF1-210ENST00000532935 PARP14Q460N5 1801 aa18.34■□□□□ 0.53
CPSF1-210ENST00000532935 RLFQ13129 1914 aa18.33■□□□□ 0.53
CPSF1-210ENST00000532935 USP17L15C9J2P7 530 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 USP17L13C9JLJ4 530 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 USP17L11C9JVI0 530 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 USP17L18D6R9N7 530 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 USP17L22D6RA61 530 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 USP17L17D6RBQ6 530 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 USP17L19D6RCP7 530 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 USP17L20D6RJB6 530 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 SDSP20132 328 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 RASA1P20936 1047 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 HOXD10P28358 340 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 USP17L24Q0WX57 530 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 VPS53Q5VIR6 699 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 SIAH1Q8IUQ4 282 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 ZNF287Q9HBT7 754 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 SRRDQ9UH36 339 aa18.33■□□□□ 0.52
CPSF1-210ENST00000532935 RBBP6Q7Z6E9 1792 aaKnown RBP18.32■□□□□ 0.52
CPSF1-210ENST00000532935 PPARAQ07869 468 aa18.32■□□□□ 0.52
CPSF1-210ENST00000532935 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
CPSF1-210ENST00000532935 SH2D4AQ9H788 454 aa18.32■□□□□ 0.52
CPSF1-210ENST00000532935 KANSL2Q9H9L4 492 aa18.32■□□□□ 0.52
CPSF1-210ENST00000532935 MORF4L1Q9UBU8 362 aa18.32■□□□□ 0.52
CPSF1-210ENST00000532935 BRCA2P51587 3418 aa18.32■□□□□ 0.52
CPSF1-210ENST00000532935 MYPNQ86TC9 1320 aa18.31■□□□□ 0.52
CPSF1-210ENST00000532935 SLC3A2P08195 630 aaKnown RBP18.31■□□□□ 0.52
CPSF1-210ENST00000532935 CATSPERGQ6ZRH7 1159 aa18.31■□□□□ 0.52
CPSF1-210ENST00000532935 ZNF589Q86UQ0 364 aaPredicted RBP18.31■□□□□ 0.52
CPSF1-210ENST00000532935 GTF3C2Q8WUA4 911 aaPredicted RBP18.31■□□□□ 0.52
CPSF1-210ENST00000532935 RPAP3Q9H6T3 665 aaPredicted RBP18.31■□□□□ 0.52
CPSF1-210ENST00000532935 TMX2Q9Y320 296 aa18.31■□□□□ 0.52
CPSF1-210ENST00000532935 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 PRDM1O75626 825 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 EEF2P13639 858 aaKnown RBP18.3■□□□□ 0.52
CPSF1-210ENST00000532935 SOX10P56693 466 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 PRKCZQ05513 592 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 PDE4BQ07343 736 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 ALX1Q15699 326 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 SLC9C1Q4G0N8 1177 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 TTC22Q5TAA0 569 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 ZNF444Q8N0Y2 327 aaPredicted RBP18.3■□□□□ 0.52
CPSF1-210ENST00000532935 ARMC5Q96C12 935 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
CPSF1-210ENST00000532935 HIP1O00291 1037 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms