RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 ATRIPQ8WXE1 791 aa16.89■□□□□ 0.3
NXF1-213ENST00000532297 ABCC12Q96J65 1359 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 PPP6R2O75170 966 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 KIF4BQ2VIQ3 1234 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 ZNF569Q5MCW4 686 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 LRRC31Q6UY01 552 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 DZIP3Q86Y13 1208 aaKnown RBP16.89■□□□□ 0.29
NXF1-213ENST00000532297 SPATA5Q8NB90 893 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 RAI14Q9P0K7 980 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 ZNF335Q9H4Z2 1342 aaPredicted RBP16.89■□□□□ 0.29
NXF1-213ENST00000532297 CYP2D7A0A087X1C5 515 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 VSNL1P62760 191 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 FMR1Q06787 632 aaKnown RBP eCLIP16.89■□□□□ 0.29
NXF1-213ENST00000532297 RESP18Q5W5W9 173 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 ADGRA1Q86SQ6 560 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 RGS22Q8NE09 1264 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 FAM71BQ8TC56 605 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 PPM1EQ8WY54 764 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 SHISA4Q96DD7 197 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 GEMIN8Q9NWZ8 242 aaKnown RBP16.89■□□□□ 0.29
NXF1-213ENST00000532297 KCNH3Q9ULD8 1083 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 PCDHB6Q9Y5E3 794 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 SLC12A7Q9Y666 1083 aa16.89■□□□□ 0.29
NXF1-213ENST00000532297 SMIM5Q71RC9 77 aa16.88■□□□□ 0.29
NXF1-213ENST00000532297 PLEKHA4Q9H4M7 779 aa16.88■□□□□ 0.29
NXF1-213ENST00000532297 BRMS1Q9HCU9 246 aa16.88■□□□□ 0.29
NXF1-213ENST00000532297 GSG1L2A8MUP6 293 aa16.88■□□□□ 0.29
NXF1-213ENST00000532297 AKR1B15C9JRZ8 316 aaPredicted RBP16.88■□□□□ 0.29
NXF1-213ENST00000532297 PRDM1O75626 825 aa16.88■□□□□ 0.29
NXF1-213ENST00000532297 TFRCP02786 760 aaKnown RBP16.88■□□□□ 0.29
NXF1-213ENST00000532297 CORO7P57737 925 aa16.88■□□□□ 0.29
NXF1-213ENST00000532297 DIS3L2Q8IYB7 885 aaKnown RBP16.88■□□□□ 0.29
NXF1-213ENST00000532297 SLAIN2Q9P270 581 aa16.88■□□□□ 0.29
NXF1-213ENST00000532297 ADGRG1Q9Y653 693 aa16.88■□□□□ 0.29
NXF1-213ENST00000532297 TAF1P21675 1872 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 WNT7AO00755 349 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 ATRNO75882 1429 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 ZNF18P17022 549 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 TDO2P48775 406 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 UBE3CQ15386 1083 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 SUSD4Q5VX71 490 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 RAD9BQ6WBX8 426 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 DRC1Q96MC2 740 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 LRP6O75581 1613 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 ARID4AP29374 1257 aaPredicted RBP16.87■□□□□ 0.29
NXF1-213ENST00000532297 TRIM29Q14134 588 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
NXF1-213ENST00000532297 FAM204AQ9H8W3 233 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
NXF1-213ENST00000532297 CDHR2Q9BYE9 1310 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 CTAGE9A4FU28 777 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 SSRP1Q08945 709 aaKnown RBP16.86■□□□□ 0.29
NXF1-213ENST00000532297 SLC4A8Q2Y0W8 1093 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 CPLX3Q8WVH0 158 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 TEX13AQ9BXU3 409 aaPredicted RBP16.86■□□□□ 0.29
NXF1-213ENST00000532297 SAMSN1Q9NSI8 373 aaKnown RBP16.86■□□□□ 0.29
NXF1-213ENST00000532297 MAN1B1Q9UKM7 699 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 SLC4A4Q9Y6R1 1079 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 ANKRD36CQ5JPF3 1778 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 SOS2Q07890 1332 aaPredicted RBP16.86■□□□□ 0.29
NXF1-213ENST00000532297 FAM237AA0A1B0GTK4 181 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 MINDY4BA8MYZ0 360 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 POLR2DO15514 142 aaKnown RBP16.86■□□□□ 0.29
NXF1-213ENST00000532297 PDE8AO60658 829 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 TUBB4BP68371 445 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 PUM3Q15397 648 aaKnown RBP16.86■□□□□ 0.29
NXF1-213ENST00000532297 EARS2Q5JPH6 523 aaKnown RBP16.86■□□□□ 0.29
NXF1-213ENST00000532297 PAXIP1Q6ZW49 1069 aaPredicted RBP16.86■□□□□ 0.29
NXF1-213ENST00000532297 ACSBG1Q96GR2 724 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 PANX2Q96RD6 677 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 GBP3Q9H0R5 595 aa16.86■□□□□ 0.29
NXF1-213ENST00000532297 NUTM2AQ8IVF1 878 aaPredicted RBP16.85■□□□□ 0.29
NXF1-213ENST00000532297 ACBD3Q9H3P7 528 aa16.85■□□□□ 0.29
NXF1-213ENST00000532297 CTAGE15A4D2H0 777 aa16.85■□□□□ 0.29
NXF1-213ENST00000532297 LRRIQ3A6PVS8 624 aaPredicted RBP16.85■□□□□ 0.29
NXF1-213ENST00000532297 CTAGE8P0CG41 777 aa16.85■□□□□ 0.29
NXF1-213ENST00000532297 FGFR2P21802 821 aa16.85■□□□□ 0.29
NXF1-213ENST00000532297 TUBB2AQ13885 445 aa16.85■□□□□ 0.29
NXF1-213ENST00000532297 NR1I3Q14994 352 aa16.85■□□□□ 0.29
NXF1-213ENST00000532297 CTAGE6Q86UF2 777 aa16.85■□□□□ 0.29
NXF1-213ENST00000532297 NOSTRINQ8IVI9 506 aa16.85■□□□□ 0.29
NXF1-213ENST00000532297 CTAGE4Q8IX94 777 aa16.85■□□□□ 0.29
NXF1-213ENST00000532297 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
NXF1-213ENST00000532297 TUBB2BQ9BVA1 445 aa16.85■□□□□ 0.29
NXF1-213ENST00000532297 HOOK1Q9UJC3 728 aaKnown RBP16.85■□□□□ 0.29
NXF1-213ENST00000532297 PPFIBP1Q86W92 1011 aa16.84■□□□□ 0.29
NXF1-213ENST00000532297 SLC35F6Q8N357 371 aa16.84■□□□□ 0.29
NXF1-213ENST00000532297 TMEM87BQ96K49 555 aa16.84■□□□□ 0.29
NXF1-213ENST00000532297 MED15Q96RN5 788 aa16.84■□□□□ 0.29
NXF1-213ENST00000532297 MED4Q9NPJ6 270 aa16.84■□□□□ 0.29
NXF1-213ENST00000532297 MDM2Q00987 491 aaPredicted RBP16.84■□□□□ 0.29
NXF1-213ENST00000532297 AKNAD1Q5T1N1 836 aa16.84■□□□□ 0.29
NXF1-213ENST00000532297 SMYD4Q8IYR2 804 aaPredicted RBP16.84■□□□□ 0.29
NXF1-213ENST00000532297 LPIN2Q92539 896 aa16.84■□□□□ 0.29
NXF1-213ENST00000532297 STAMQ92783 540 aa16.84■□□□□ 0.29
NXF1-213ENST00000532297 DEF6Q9H4E7 631 aa16.84■□□□□ 0.29
NXF1-213ENST00000532297 ABCF2Q9UG63 623 aa16.84■□□□□ 0.29
NXF1-213ENST00000532297 DACH1Q9UI36 760 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1543.2 ms