RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 USP14P54578 494 aa27.51■■□□□ 1.99
CAPN1-222ENST00000532285 TMEM179Q6ZVK1 233 aa27.51■■□□□ 1.99
CAPN1-222ENST00000532285 CCDC17Q96LX7 622 aa27.51■■□□□ 1.99
CAPN1-222ENST00000532285 KIAA1683Q9H0B3 1180 aa27.51■■□□□ 1.99
CAPN1-222ENST00000532285 SMIM22K7EJ46 135 aa27.5■■□□□ 1.99
CAPN1-222ENST00000532285 FMNL1O95466 1100 aaPredicted RBP27.5■■□□□ 1.99
CAPN1-222ENST00000532285 PRMT2P55345 433 aa27.5■■□□□ 1.99
CAPN1-222ENST00000532285 IRX3P78415 501 aaPredicted RBP27.5■■□□□ 1.99
CAPN1-222ENST00000532285 PLEKHM2Q8IWE5 1019 aa27.5■■□□□ 1.99
CAPN1-222ENST00000532285 TRIM47Q96LD4 638 aa27.5■■□□□ 1.99
CAPN1-222ENST00000532285 C12orf42Q96LP6 360 aa27.5■■□□□ 1.99
CAPN1-222ENST00000532285 OSBPL3Q9H4L5 887 aa27.5■■□□□ 1.99
CAPN1-222ENST00000532285 HOXD10P28358 340 aa27.49■■□□□ 1.99
CAPN1-222ENST00000532285 CTGFP29279 349 aa27.49■■□□□ 1.99
CAPN1-222ENST00000532285 TDO2P48775 406 aa27.49■■□□□ 1.99
CAPN1-222ENST00000532285 ANKRD13CQ8N6S4 541 aa27.49■■□□□ 1.99
CAPN1-222ENST00000532285 ACER1Q8TDN7 264 aa27.49■■□□□ 1.99
CAPN1-222ENST00000532285 NACAP1Q9BZK3 213 aa27.49■■□□□ 1.99
CAPN1-222ENST00000532285 ECM2O94769 699 aaPredicted RBP27.48■■□□□ 1.99
CAPN1-222ENST00000532285 FCGRTP55899 365 aa27.48■■□□□ 1.99
CAPN1-222ENST00000532285 ZYXQ15942 572 aaKnown RBP27.48■■□□□ 1.99
CAPN1-222ENST00000532285 EPB41L4AQ9HCS5 686 aaPredicted RBP27.48■■□□□ 1.99
CAPN1-222ENST00000532285 CENPFP49454 3210 aa27.48■■□□□ 1.99
CAPN1-222ENST00000532285 MINDY4BA8MYZ0 360 aa27.47■■□□□ 1.99
CAPN1-222ENST00000532285 TRIM6-TRIM34B2RNG4 842 aa27.47■■□□□ 1.99
CAPN1-222ENST00000532285 AKR1B1P15121 316 aa27.47■■□□□ 1.99
CAPN1-222ENST00000532285 FAM110CQ1W6H9 321 aa27.47■■□□□ 1.99
CAPN1-222ENST00000532285 IFNL3Q8IZI9 196 aa27.47■■□□□ 1.99
CAPN1-222ENST00000532285 SRRDQ9UH36 339 aa27.47■■□□□ 1.99
CAPN1-222ENST00000532285 PTCH2Q9Y6C5 1203 aa27.47■■□□□ 1.99
CAPN1-222ENST00000532285 ROBO3Q96MS0 1386 aa27.47■■□□□ 1.99
CAPN1-222ENST00000532285 P2RX7Q99572 595 aaKnown RBP27.46■■□□□ 1.99
CAPN1-222ENST00000532285 HELLSQ9NRZ9 838 aa27.46■■□□□ 1.99
CAPN1-222ENST00000532285 RGS19P49795 217 aa27.45■■□□□ 1.98
CAPN1-222ENST00000532285 RILPL2Q969X0 211 aa27.45■■□□□ 1.98
CAPN1-222ENST00000532285 USP17L15C9J2P7 530 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 USP17L13C9JLJ4 530 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 USP17L11C9JVI0 530 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 USP17L18D6R9N7 530 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 USP17L22D6RA61 530 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 USP17L17D6RBQ6 530 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 USP17L19D6RCP7 530 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 USP17L20D6RJB6 530 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 HERVK_113P62684 666 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 USP17L24Q0WX57 530 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 SLC9C1Q4G0N8 1177 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 NBPF11Q86T75 865 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 ARMC5Q96C12 935 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 MKNK2Q9HBH9 465 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 ARHGEF10LQ9HCE6 1279 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 DOCK3Q8IZD9 2030 aa27.44■■□□□ 1.98
CAPN1-222ENST00000532285 GREB1LQ9C091 1923 aaPredicted RBP27.43■■□□□ 1.98
CAPN1-222ENST00000532285 A0A1W2PRG0 241 aa27.43■■□□□ 1.98
CAPN1-222ENST00000532285 SOX10P56693 466 aa27.43■■□□□ 1.98
CAPN1-222ENST00000532285 ICA1Q05084 483 aa27.43■■□□□ 1.98
CAPN1-222ENST00000532285 CCDC129Q6ZRS4 1044 aa27.43■■□□□ 1.98
CAPN1-222ENST00000532285 GTF3C2Q8WUA4 911 aaPredicted RBP27.43■■□□□ 1.98
CAPN1-222ENST00000532285 NAPBQ9H115 298 aa27.43■■□□□ 1.98
CAPN1-222ENST00000532285 ZNF287Q9HBT7 754 aa27.43■■□□□ 1.98
CAPN1-222ENST00000532285 MYPNQ86TC9 1320 aa27.42■■□□□ 1.98
CAPN1-222ENST00000532285 VCAM1P19320 739 aa27.42■■□□□ 1.98
CAPN1-222ENST00000532285 CATSPERGQ6ZRH7 1159 aa27.42■■□□□ 1.98
CAPN1-222ENST00000532285 SH2D4AQ9H788 454 aa27.42■■□□□ 1.98
CAPN1-222ENST00000532285 KANSL2Q9H9L4 492 aa27.42■■□□□ 1.98
CAPN1-222ENST00000532285 MORF4L1Q9UBU8 362 aa27.42■■□□□ 1.98
CAPN1-222ENST00000532285 MCMDC2Q4G0Z9 681 aa27.41■■□□□ 1.98
CAPN1-222ENST00000532285 SIAH1Q8IUQ4 282 aa27.41■■□□□ 1.98
CAPN1-222ENST00000532285 STK11IPQ8N1F8 1099 aa27.41■■□□□ 1.98
CAPN1-222ENST00000532285 TNPO2O14787 897 aaKnown RBP27.4■■□□□ 1.98
CAPN1-222ENST00000532285 RASA1P20936 1047 aa27.4■■□□□ 1.98
CAPN1-222ENST00000532285 RAET1EQ8TD07 263 aa27.4■■□□□ 1.98
CAPN1-222ENST00000532285 FAM227BQ96M60 508 aa27.4■■□□□ 1.98
CAPN1-222ENST00000532285 TMX2Q9Y320 296 aa27.4■■□□□ 1.98
CAPN1-222ENST00000532285 A0A0D9SFI3 127 aa27.39■■□□□ 1.98
CAPN1-222ENST00000532285 SLC3A2P08195 630 aaKnown RBP27.39■■□□□ 1.98
CAPN1-222ENST00000532285 CLEC10AQ8IUN9 316 aa27.39■■□□□ 1.98
CAPN1-222ENST00000532285 COA7Q96BR5 231 aa27.39■■□□□ 1.98
CAPN1-222ENST00000532285 RPAP3Q9H6T3 665 aaPredicted RBP27.39■■□□□ 1.98
CAPN1-222ENST00000532285 RBBP6Q7Z6E9 1792 aaKnown RBP27.39■■□□□ 1.98
CAPN1-222ENST00000532285 PRKCZQ05513 592 aa27.38■■□□□ 1.97
CAPN1-222ENST00000532285 NMIQ13287 307 aaPredicted RBP27.38■■□□□ 1.97
CAPN1-222ENST00000532285 ZNF444Q8N0Y2 327 aaPredicted RBP27.38■■□□□ 1.97
CAPN1-222ENST00000532285 GPRC5AQ8NFJ5 357 aa27.38■■□□□ 1.97
CAPN1-222ENST00000532285 LPAR1Q92633 364 aa27.38■■□□□ 1.97
CAPN1-222ENST00000532285 ZNF333Q96JL9 665 aa27.38■■□□□ 1.97
CAPN1-222ENST00000532285 RBPJLQ9UBG7 517 aa27.38■■□□□ 1.97
CAPN1-222ENST00000532285 MYH4Q9Y623 1939 aa27.37■■□□□ 1.97
CAPN1-222ENST00000532285 FOXP2O15409 715 aa27.37■■□□□ 1.97
CAPN1-222ENST00000532285 EEF2P13639 858 aaKnown RBP27.37■■□□□ 1.97
CAPN1-222ENST00000532285 SDSP20132 328 aa27.37■■□□□ 1.97
CAPN1-222ENST00000532285 PDE4BQ07343 736 aa27.37■■□□□ 1.97
CAPN1-222ENST00000532285 PPARAQ07869 468 aa27.37■■□□□ 1.97
CAPN1-222ENST00000532285 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.37■■□□□ 1.97
CAPN1-222ENST00000532285 VCPKMTQ9H867 229 aa27.37■■□□□ 1.97
CAPN1-222ENST00000532285 TXNRD2Q9NNW7 524 aa27.37■■□□□ 1.97
CAPN1-222ENST00000532285 GABRQQ9UN88 632 aa27.37■■□□□ 1.97
CAPN1-222ENST00000532285 PDE4AP27815 886 aa27.36■■□□□ 1.97
CAPN1-222ENST00000532285 ATP2B2Q01814 1243 aa27.36■■□□□ 1.97
CAPN1-222ENST00000532285 ALX1Q15699 326 aa27.36■■□□□ 1.97
CAPN1-222ENST00000532285 VPS53Q5VIR6 699 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms