RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 USP17L15C9J2P7 530 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 USP17L13C9JLJ4 530 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 USP17L11C9JVI0 530 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 USP17L18D6R9N7 530 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 USP17L22D6RA61 530 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 USP17L17D6RBQ6 530 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 USP17L19D6RCP7 530 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 USP17L20D6RJB6 530 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 ARID4AP29374 1257 aaPredicted RBP9.62□□□□□ -0.87
NXF1-212ENST00000531872 PPP4CP60510 307 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 USP17L24Q0WX57 530 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 TFCP2Q12800 502 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 TRIM60Q495X7 471 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 CATSPERGQ6ZRH7 1159 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 SH3RF1Q7Z6J0 888 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 USP38Q8NB14 1042 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 PRDM5Q9NQX1 630 aaPredicted RBP9.62□□□□□ -0.87
NXF1-212ENST00000531872 RAI14Q9P0K7 980 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 BTBD7Q9P203 1132 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 HDAC5Q9UQL6 1122 aa9.62□□□□□ -0.87
NXF1-212ENST00000531872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.62□□□□□ -0.87
NXF1-212ENST00000531872 KBTBD13C9JR72 458 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 SEPT4O43236 478 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 BAG3O95817 575 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 PLCG2P16885 1265 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 MCAMP43121 646 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 GRIN2CQ14957 1233 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 ALDH1L2Q3SY69 923 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 WDR78Q5VTH9 848 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 OLFML2BQ68BL8 750 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 MAPKAPK5Q8IW41 473 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 CRACR2BQ8N4Y2 399 aaPredicted RBP9.61□□□□□ -0.87
NXF1-212ENST00000531872 TGFBRAP1Q8WUH2 860 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 AATFQ9NY61 560 aaKnown RBP eCLIP9.61□□□□□ -0.87
NXF1-212ENST00000531872 PALD1Q9ULE6 856 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 IVNS1ABPQ9Y6Y0 642 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 FOCADQ5VW36 1801 aa9.61□□□□□ -0.87
NXF1-212ENST00000531872 CDK5RAP2Q96SN8 1893 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 SPDYE16A6NNV3 312 aaPredicted RBP9.6□□□□□ -0.87
NXF1-212ENST00000531872 GH2P01242 217 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 ITGB8P26012 769 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 ADCYAP1R1P41586 468 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 USP14P54578 494 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 EPHB4P54760 987 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 LRRC41Q15345 812 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 NAA16Q6N069 864 aaPredicted RBP9.6□□□□□ -0.87
NXF1-212ENST00000531872 NEUROD6Q96NK8 337 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 NOL10Q9BSC4 688 aaKnown RBP9.6□□□□□ -0.87
NXF1-212ENST00000531872 TRIM34Q9BYJ4 488 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 KIAA1683Q9H0B3 1180 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 LRP2BPQ9P2M1 347 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 RAPGEFL1Q9UHV5 662 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 TACC3Q9Y6A5 838 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 ZNF236Q9UL36 1845 aa9.6□□□□□ -0.87
NXF1-212ENST00000531872 NCOR1O75376 2440 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 STRNO43815 780 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 HLA-DOAP06340 250 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 UQCRFS1P1P0C7P4 283 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 VCAM1P19320 739 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 ADORA2AP29274 412 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 PLA2G5P39877 138 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 TLE2Q04725 743 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 MTX1Q13505 466 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 ZYXQ15942 572 aaKnown RBP9.59□□□□□ -0.87
NXF1-212ENST00000531872 ANO1Q5XXA6 986 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 TATDN1Q6P1N9 297 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 ADGRA1Q86SQ6 560 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 DPP9Q86TI2 863 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 RNPC3Q96LT9 517 aaKnown RBP9.59□□□□□ -0.87
NXF1-212ENST00000531872 MEIS3Q99687 375 aa9.59□□□□□ -0.87
NXF1-212ENST00000531872 XIRP2A4UGR9 3374 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.58□□□□□ -0.88
NXF1-212ENST00000531872 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.58□□□□□ -0.88
NXF1-212ENST00000531872 E9PSI1 815 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 KIAA0355O15063 1070 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 SRGAP3O43295 1099 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 IGSF3O75054 1194 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 COBLO75128 1261 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 CLTBP09497 229 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 DNAJB2P25686 324 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 GORABQ5T7V8 394 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 ATF7IPQ6VMQ6 1270 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 SHCBP1Q8NEM2 672 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 ACER1Q8TDN7 264 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 ATXN2LQ8WWM7 1075 aaKnown RBP9.58□□□□□ -0.88
NXF1-212ENST00000531872 FERMT2Q96AC1 680 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 FEZ1Q99689 392 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 MOV10L1Q9BXT6 1211 aaKnown RBP9.58□□□□□ -0.88
NXF1-212ENST00000531872 ZNF576Q9H609 170 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 PHF24Q9UPV7 400 aa9.58□□□□□ -0.88
NXF1-212ENST00000531872 FAM47AQ5JRC9 791 aa9.57□□□□□ -0.88
NXF1-212ENST00000531872 PRAMEF19Q5SWL8 479 aa9.57□□□□□ -0.88
NXF1-212ENST00000531872 AKNAD1Q5T1N1 836 aa9.57□□□□□ -0.88
NXF1-212ENST00000531872 EHD4Q9H223 541 aa9.57□□□□□ -0.88
NXF1-212ENST00000531872 RPAP3Q9H6T3 665 aaPredicted RBP9.57□□□□□ -0.88
NXF1-212ENST00000531872 SMC4Q9NTJ3 1288 aa9.57□□□□□ -0.88
NXF1-212ENST00000531872 SAP30BPQ9UHR5 308 aaKnown RBP9.57□□□□□ -0.88
NXF1-212ENST00000531872 BDP1A6H8Y1 2624 aa9.57□□□□□ -0.88
NXF1-212ENST00000531872 CHD9Q3L8U1 2897 aa9.56□□□□□ -0.88
NXF1-212ENST00000531872 MYCNP04198 464 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms