RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 ERVK-9P63128 1117 aa21.63■■□□□ 1.05
PTPN11-204ENST00000531326 ERVK-24P63145 666 aa21.63■■□□□ 1.05
PTPN11-204ENST00000531326 MAP3K21Q5TCX8 1036 aa21.63■■□□□ 1.05
PTPN11-204ENST00000531326 ANKRD45Q5TZF3 282 aa21.63■■□□□ 1.05
PTPN11-204ENST00000531326 USP17L2Q6R6M4 530 aa21.63■■□□□ 1.05
PTPN11-204ENST00000531326 NECAB2Q7Z6G3 386 aa21.63■■□□□ 1.05
PTPN11-204ENST00000531326 ANKLE1Q8NAG6 615 aa21.63■■□□□ 1.05
PTPN11-204ENST00000531326 NUDT12Q9BQG2 462 aa21.63■■□□□ 1.05
PTPN11-204ENST00000531326 EHD4Q9H223 541 aa21.63■■□□□ 1.05
PTPN11-204ENST00000531326 LAMA3Q16787 3333 aa21.62■■□□□ 1.05
PTPN11-204ENST00000531326 CERS3Q8IU89 383 aa21.62■■□□□ 1.05
PTPN11-204ENST00000531326 USP6NLQ92738 828 aa21.62■■□□□ 1.05
PTPN11-204ENST00000531326 C12orf42Q96LP6 360 aa21.62■■□□□ 1.05
PTPN11-204ENST00000531326 RIOK1Q9BRS2 568 aaKnown RBP21.62■■□□□ 1.05
PTPN11-204ENST00000531326 PAGR1Q9BTK6 254 aa21.62■■□□□ 1.05
PTPN11-204ENST00000531326 SERPINB13Q9UIV8 391 aa21.62■■□□□ 1.05
PTPN11-204ENST00000531326 XRCC5P13010 732 aaKnown RBP21.61■■□□□ 1.05
PTPN11-204ENST00000531326 MAPK4P31152 587 aa21.61■■□□□ 1.05
PTPN11-204ENST00000531326 MAP3K12Q12852 859 aa21.61■■□□□ 1.05
PTPN11-204ENST00000531326 ZYXQ15942 572 aaKnown RBP21.61■■□□□ 1.05
PTPN11-204ENST00000531326 SOCS4Q8WXH5 440 aa21.61■■□□□ 1.05
PTPN11-204ENST00000531326 CNMDO75829 334 aa21.6■■□□□ 1.05
PTPN11-204ENST00000531326 PRKAR2AP13861 404 aaKnown RBP21.6■■□□□ 1.05
PTPN11-204ENST00000531326 PLCD1P51178 756 aa21.6■■□□□ 1.05
PTPN11-204ENST00000531326 MORN1Q5T089 497 aa21.6■■□□□ 1.05
PTPN11-204ENST00000531326 B4GALNT3Q6L9W6 998 aa21.6■■□□□ 1.05
PTPN11-204ENST00000531326 GPR142Q7Z601 462 aa21.6■■□□□ 1.05
PTPN11-204ENST00000531326 GTF3C2Q8WUA4 911 aaPredicted RBP21.6■■□□□ 1.05
PTPN11-204ENST00000531326 STAP2Q9UGK3 403 aa21.6■■□□□ 1.05
PTPN11-204ENST00000531326 OGDHLQ9ULD0 1010 aa21.6■■□□□ 1.05
PTPN11-204ENST00000531326 SHMT1P34896 483 aa21.59■■□□□ 1.05
PTPN11-204ENST00000531326 NUCB1Q02818 461 aa21.59■■□□□ 1.05
PTPN11-204ENST00000531326 RAB3GAP1Q15042 981 aa21.59■■□□□ 1.05
PTPN11-204ENST00000531326 CCL14Q16627 93 aa21.59■■□□□ 1.05
PTPN11-204ENST00000531326 CERKLQ49MI3 558 aaPredicted RBP21.59■■□□□ 1.05
PTPN11-204ENST00000531326 TMED8Q6PL24 325 aaPredicted RBP21.59■■□□□ 1.05
PTPN11-204ENST00000531326 TTC6Q86TZ1 520 aa21.59■■□□□ 1.05
PTPN11-204ENST00000531326 NAV1Q8NEY1 1877 aa21.59■■□□□ 1.05
PTPN11-204ENST00000531326 ACER1Q8TDN7 264 aa21.59■■□□□ 1.05
PTPN11-204ENST00000531326 OTUD7AQ8TE49 926 aaPredicted RBP21.59■■□□□ 1.05
PTPN11-204ENST00000531326 EVX2Q03828 476 aa21.58■■□□□ 1.05
PTPN11-204ENST00000531326 CACNB2Q08289 660 aaPredicted RBP21.58■■□□□ 1.05
PTPN11-204ENST00000531326 ABCB5Q2M3G0 1257 aa21.58■■□□□ 1.05
PTPN11-204ENST00000531326 PLEKHH3Q7Z736 793 aa21.58■■□□□ 1.05
PTPN11-204ENST00000531326 FEZ1Q99689 392 aa21.58■■□□□ 1.05
PTPN11-204ENST00000531326 NBPF3Q9H094 633 aa21.58■■□□□ 1.05
PTPN11-204ENST00000531326 KIAA1683Q9H0B3 1180 aa21.58■■□□□ 1.05
PTPN11-204ENST00000531326 SALL3Q9BXA9 1300 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 A0A1W2PPC1 479 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 USP17L15C9J2P7 530 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 USP17L13C9JLJ4 530 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 USP17L11C9JVI0 530 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 USP17L18D6R9N7 530 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 USP17L22D6RA61 530 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 USP17L17D6RBQ6 530 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 USP17L19D6RCP7 530 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 USP17L20D6RJB6 530 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 ZKSCAN1P17029 563 aaPredicted RBP21.57■■□□□ 1.04
PTPN11-204ENST00000531326 GUCY1A2P33402 732 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 USP17L24Q0WX57 530 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 ERICH6BQ5W0A0 696 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 CATSPERGQ6ZRH7 1159 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 CHD1LQ86WJ1 897 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 C7orf61Q8IZ16 206 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 LNPKQ9C0E8 428 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 RABGAP1Q9Y3P9 1069 aa21.57■■□□□ 1.04
PTPN11-204ENST00000531326 MAGEB6P1A0A0J9YX57 407 aa21.56■■□□□ 1.04
PTPN11-204ENST00000531326 SOX1O00570 391 aaPredicted RBP21.56■■□□□ 1.04
PTPN11-204ENST00000531326 PDE6AP16499 860 aa21.56■■□□□ 1.04
PTPN11-204ENST00000531326 VCAM1P19320 739 aa21.56■■□□□ 1.04
PTPN11-204ENST00000531326 RGS2P41220 211 aa21.56■■□□□ 1.04
PTPN11-204ENST00000531326 GABPAQ06546 454 aa21.56■■□□□ 1.04
PTPN11-204ENST00000531326 CCAR1Q8IX12 1150 aaKnown RBP21.56■■□□□ 1.04
PTPN11-204ENST00000531326 TRMT44Q8IYL2 757 aaKnown RBP21.56■■□□□ 1.04
PTPN11-204ENST00000531326 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.56■■□□□ 1.04
PTPN11-204ENST00000531326 C11orf49Q9H6J7 331 aa21.56■■□□□ 1.04
PTPN11-204ENST00000531326 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
PTPN11-204ENST00000531326 PFASO15067 1338 aa21.55■■□□□ 1.04
PTPN11-204ENST00000531326 ATP5JP18859 108 aa21.55■■□□□ 1.04
PTPN11-204ENST00000531326 CCND3P30281 292 aaPredicted RBP21.55■■□□□ 1.04
PTPN11-204ENST00000531326 USP14P54578 494 aa21.55■■□□□ 1.04
PTPN11-204ENST00000531326 TTF1Q15361 905 aaPredicted RBP21.55■■□□□ 1.04
PTPN11-204ENST00000531326 SLC9C2Q5TAH2 1124 aa21.55■■□□□ 1.04
PTPN11-204ENST00000531326 APBA2Q99767 749 aa21.55■■□□□ 1.04
PTPN11-204ENST00000531326 GDF15Q99988 308 aa21.55■■□□□ 1.04
PTPN11-204ENST00000531326 ECHDC1Q9NTX5 307 aa21.55■■□□□ 1.04
PTPN11-204ENST00000531326 ZMYND8Q9ULU4 1186 aaPredicted RBP21.55■■□□□ 1.04
PTPN11-204ENST00000531326 TCRBV5S4A2TA0A5A2 114 aa21.54■■□□□ 1.04
PTPN11-204ENST00000531326 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
PTPN11-204ENST00000531326 LHX8Q68G74 356 aa21.54■■□□□ 1.04
PTPN11-204ENST00000531326 LBX2Q6XYB7 198 aa21.54■■□□□ 1.04
PTPN11-204ENST00000531326 CABP5Q9NP86 173 aa21.54■■□□□ 1.04
PTPN11-204ENST00000531326 BTBD7Q9P203 1132 aa21.54■■□□□ 1.04
PTPN11-204ENST00000531326 ZNF532Q9HCE3 1301 aa21.54■■□□□ 1.04
PTPN11-204ENST00000531326 FRMPD3Q5JV73 1810 aa21.53■■□□□ 1.04
PTPN11-204ENST00000531326 POLR3DP05423 398 aaPredicted RBP21.53■■□□□ 1.04
PTPN11-204ENST00000531326 MAP2K5Q13163 448 aa21.53■■□□□ 1.04
PTPN11-204ENST00000531326 SEPT2Q15019 361 aa21.53■■□□□ 1.04
PTPN11-204ENST00000531326 EDC3Q96F86 508 aaKnown RBP21.53■■□□□ 1.04
PTPN11-204ENST00000531326 CRNKL1Q9BZJ0 848 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms