RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 POLR2BP30876 1174 aaKnown RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 CDKN1CP49918 316 aaPredicted RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 NEK4P51957 841 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 PMS1P54277 932 aaKnown RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 EPHB1P54762 984 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 TBX4P57082 545 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 ERVK-24P63145 666 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 OS9Q13438 667 aaPredicted RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 CBX2Q14781 532 aaPredicted RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 PPP2R5AQ15172 486 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 KIF4BQ2VIQ3 1234 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 BRDTQ58F21 947 aaPredicted RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 AKAP4Q5JQC9 854 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 PPM1JQ5JR12 505 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 FAM209AQ5JX71 171 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 TDRD10Q5VZ19 366 aaKnown RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 SLC6A19Q695T7 634 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 POMZP3Q6PJE2 187 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 NSMFQ6X4W1 530 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 DDX42Q86XP3 938 aaKnown RBP eCLIP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 JAMLQ86YT9 394 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 MCATQ8IVS2 390 aaKnown RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 EXOC8Q8IYI6 725 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 FAM9AQ8IZU1 332 aaPredicted RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 RIN3Q8TB24 985 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 LEO1Q8WVC0 666 aaPredicted RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 KLHL6Q8WZ60 621 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 ACSF2Q96CM8 615 aaPredicted RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 TMEM87BQ96K49 555 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 TRIM47Q96LD4 638 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 CCDC74BQ96LY2 380 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 HAUS7Q99871 368 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 AAASQ9NRG9 546 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 MBIPQ9NS73 344 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 CACNA2D2Q9NY47 1150 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 GABBR1Q9UBS5 961 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 SUCOQ9UBS9 1254 aaKnown RBP2.78□□□□□ -1.96
FGFR1-235ENST00000530701 NDOR1Q9UHB4 597 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 GGA1Q9UJY5 639 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 HCN2Q9UL51 889 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 HIF3AQ9Y2N7 669 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 RIPOR2Q9Y4F9 1068 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 EID1Q9Y6B2 187 aa2.78□□□□□ -1.96
FGFR1-235ENST00000530701 A0A1W2PQU0 124 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 C2CD2LO14523 706 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 RGS13O14921 159 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 KIF3BO15066 747 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 PRODHO43272 600 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 ZNF862O60290 1169 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 OPA1O60313 960 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 BRINP1O60477 761 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 RNGTTO60942 597 aaKnown RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 PPFIA3O75145 1194 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 RASGRP1O95267 797 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 ECEL1O95672 775 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 MAP4K4O95819 1239 aaPredicted RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 KRT18P05783 430 aaKnown RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 ITGAVP06756 1048 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 EPHX1P07099 455 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 FGFR1P11362 822 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 PABPC1P11940 636 aaKnown RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 ITGA4P13612 1032 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 AMPD1P23109 780 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 CD68P34810 354 aaPredicted RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 KCNJ6P48051 423 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 PPP2R2AP63151 447 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 RNF4P78317 190 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 ITKQ08881 620 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 STRN3Q13033 797 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 DUOXA2Q1HG44 320 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 ZC3H12AQ5D1E8 599 aaKnown RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 EXOSC6Q5RKV6 272 aaKnown RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 NOL9Q5SY16 702 aaKnown RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 MSL1Q68DK7 614 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 CCSAPQ6IQ19 270 aaPredicted RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 UBE2R2Q712K3 238 aaPredicted RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 MRPL41Q8IXM3 137 aaKnown RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 WDR66Q8TBY9 1149 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 KCTD13Q8WZ19 329 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 USP7Q93009 1102 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 KISS1RQ969F8 398 aaPredicted RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 RELTQ969Z4 430 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 MTMR8Q96EF0 704 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 KLHDC7BQ96G42 594 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 C8orf48Q96LL4 319 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 FGD4Q96M96 766 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 DPH2Q9BQC3 489 aaPredicted RBP2.77□□□□□ -1.97
FGFR1-235ENST00000530701 WDR18Q9BV38 432 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 ATXN3LQ9H3M9 355 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 CYP4F12Q9HCS2 524 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 ARHGEF4Q9NR80 690 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 AP4E1Q9UPM8 1137 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 AKT3Q9Y243 479 aa2.77□□□□□ -1.97
FGFR1-235ENST00000530701 A0A087X0B3 334 aa2.76□□□□□ -1.97
FGFR1-235ENST00000530701 LOC100289279A0A1B0GTE1 492 aa2.76□□□□□ -1.97
FGFR1-235ENST00000530701 GOLGA6CA6NDK9 693 aa2.76□□□□□ -1.97
FGFR1-235ENST00000530701 GOLGA6BA6NDN3 693 aa2.76□□□□□ -1.97
FGFR1-235ENST00000530701 B4E1Z4 1266 aa2.76□□□□□ -1.97
FGFR1-235ENST00000530701 C11orf95C9JLR9 678 aaPredicted RBP2.76□□□□□ -1.97
FGFR1-235ENST00000530701 M0R082 166 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms