RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 BRPF3Q9ULD4 1205 aa12.52□□□□□ -0.41
SOX6-213ENST00000530378 ANGEL1Q9UNK9 670 aaKnown RBP12.52□□□□□ -0.41
SOX6-213ENST00000530378 PPP2R3BQ9Y5P8 575 aa12.52□□□□□ -0.41
SOX6-213ENST00000530378 KLF18A0A0U1RQI7 1052 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 INPP5BP32019 993 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
SOX6-213ENST00000530378 SART3Q15020 963 aaKnown RBP12.51□□□□□ -0.41
SOX6-213ENST00000530378 TATDN1Q6P1N9 297 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 METTL16Q86W50 562 aaKnown RBP12.51□□□□□ -0.41
SOX6-213ENST00000530378 LDHDQ86WU2 507 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
SOX6-213ENST00000530378 NECAB1Q8N987 351 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 IGDCC4Q8TDY8 1250 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
SOX6-213ENST00000530378 WRNIP1Q96S55 665 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 GOLGA8BA8MQT2 603 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 RAD21O60216 631 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 PPFIA3O75145 1194 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 SEC23AQ15436 765 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 IFIT1BQ5T764 474 aaKnown RBP12.51□□□□□ -0.41
SOX6-213ENST00000530378 DCAF15Q66K64 600 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 CDC37L1Q7L3B6 337 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 NEDD1Q8NHV4 660 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 TMEM87BQ96K49 555 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 ZNF341Q9BYN7 854 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 ZBTB21Q9ULJ3 1066 aa12.51□□□□□ -0.41
SOX6-213ENST00000530378 PAPPA2Q9BXP8 1791 aa12.5□□□□□ -0.41
SOX6-213ENST00000530378 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
SOX6-213ENST00000530378 PHF20L1A8MW92 1017 aa12.5□□□□□ -0.41
SOX6-213ENST00000530378 K7ELQ4 463 aaPredicted RBP12.5□□□□□ -0.41
SOX6-213ENST00000530378 GUCY1A2P33402 732 aa12.5□□□□□ -0.41
SOX6-213ENST00000530378 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
SOX6-213ENST00000530378 ME3Q16798 604 aa12.5□□□□□ -0.41
SOX6-213ENST00000530378 SUPT20HL1Q3ZLR7 823 aa12.5□□□□□ -0.41
SOX6-213ENST00000530378 RCSD1Q6JBY9 416 aa12.5□□□□□ -0.41
SOX6-213ENST00000530378 TMX3Q96JJ7 454 aa12.5□□□□□ -0.41
SOX6-213ENST00000530378 NCOA5Q9HCD5 579 aaKnown RBP12.5□□□□□ -0.41
SOX6-213ENST00000530378 WDR19Q8NEZ3 1342 aa12.5□□□□□ -0.41
SOX6-213ENST00000530378 PLIN4Q96Q06 1357 aa12.5□□□□□ -0.41
SOX6-213ENST00000530378 BAZ2BQ9UIF8 2168 aaKnown RBP12.5□□□□□ -0.41
SOX6-213ENST00000530378 TBC1D12O60347 775 aa12.49□□□□□ -0.41
SOX6-213ENST00000530378 ICA1Q05084 483 aa12.49□□□□□ -0.41
SOX6-213ENST00000530378 BECN1Q14457 450 aa12.49□□□□□ -0.41
SOX6-213ENST00000530378 CCDC83Q8IWF9 413 aa12.49□□□□□ -0.41
SOX6-213ENST00000530378 NUP133Q8WUM0 1156 aa12.49□□□□□ -0.41
SOX6-213ENST00000530378 SNX21Q969T3 373 aa12.49□□□□□ -0.41
SOX6-213ENST00000530378 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
SOX6-213ENST00000530378 LIMCH1Q9UPQ0 1083 aa12.49□□□□□ -0.41
SOX6-213ENST00000530378 CAP2P40123 477 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 ANKRD1Q15327 319 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 ZNF654Q8IZM8 581 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 TMEM47Q9BQJ4 181 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 KAT14Q9H8E8 782 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 MTMR4Q9NYA4 1195 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 CLIP2Q9UDT6 1046 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 TAOK2Q9UL54 1235 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 SLC12A7Q9Y666 1083 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 TRPM7Q96QT4 1865 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 IGKV6D-41A0A0C4DH26 115 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 USP2O75604 605 aaPredicted RBP12.48□□□□□ -0.41
SOX6-213ENST00000530378 EEF2P13639 858 aaKnown RBP12.48□□□□□ -0.41
SOX6-213ENST00000530378 NF2P35240 595 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 ST3GAL1Q11201 340 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 ZYXQ15942 572 aaKnown RBP12.48□□□□□ -0.41
SOX6-213ENST00000530378 APOA5Q6Q788 366 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 TMEM179Q6ZVK1 233 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 HOOK2Q96ED9 719 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 CCDC17Q96LX7 622 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 AGXT2Q9BYV1 514 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 ISY1Q9ULR0 285 aaKnown RBP12.48□□□□□ -0.41
SOX6-213ENST00000530378 PHIPQ8WWQ0 1821 aa12.48□□□□□ -0.41
SOX6-213ENST00000530378 PDIA3P30101 505 aaKnown RBP12.47□□□□□ -0.41
SOX6-213ENST00000530378 ECE1P42892 770 aa12.47□□□□□ -0.41
SOX6-213ENST00000530378 MAP3K10Q02779 954 aa12.47□□□□□ -0.41
SOX6-213ENST00000530378 DGKZQ13574 1117 aa12.47□□□□□ -0.41
SOX6-213ENST00000530378 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
SOX6-213ENST00000530378 PNMA1Q8ND90 353 aa12.47□□□□□ -0.41
SOX6-213ENST00000530378 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
SOX6-213ENST00000530378 KLRG1Q96E93 195 aa12.47□□□□□ -0.41
SOX6-213ENST00000530378 CLMNQ96JQ2 1002 aa12.47□□□□□ -0.41
SOX6-213ENST00000530378 ALDH8A1Q9H2A2 487 aaPredicted RBP12.47□□□□□ -0.41
SOX6-213ENST00000530378 DAXXQ9UER7 740 aaPredicted RBP12.47□□□□□ -0.41
SOX6-213ENST00000530378 HPS5Q9UPZ3 1129 aa12.47□□□□□ -0.41
SOX6-213ENST00000530378 GOLGA8AA7E2F4 631 aa12.46□□□□□ -0.41
SOX6-213ENST00000530378 KIF3CO14782 793 aa12.46□□□□□ -0.41
SOX6-213ENST00000530378 ZBTB43O43298 467 aa12.46□□□□□ -0.41
SOX6-213ENST00000530378 PPP1R12BO60237 982 aaPredicted RBP12.46□□□□□ -0.41
SOX6-213ENST00000530378 CELF2O95319 508 aaKnown RBP12.46□□□□□ -0.41
SOX6-213ENST00000530378 TTLL1O95922 423 aa12.46□□□□□ -0.41
SOX6-213ENST00000530378 HSP90AA1P07900 732 aaKnown RBP12.46□□□□□ -0.41
SOX6-213ENST00000530378 LIFRP42702 1097 aa12.46□□□□□ -0.41
SOX6-213ENST00000530378 VGLL4Q14135 290 aa12.46□□□□□ -0.41
SOX6-213ENST00000530378 SGMS1Q86VZ5 419 aa12.46□□□□□ -0.41
SOX6-213ENST00000530378 CMTR1Q8N1G2 835 aaKnown RBP12.46□□□□□ -0.41
SOX6-213ENST00000530378 SLKQ9H2G2 1235 aaPredicted RBP12.46□□□□□ -0.41
SOX6-213ENST00000530378 TCP11L1Q9NUJ3 509 aa12.46□□□□□ -0.41
SOX6-213ENST00000530378 MYH6P13533 1939 aa12.46□□□□□ -0.41
SOX6-213ENST00000530378 A0A1W2PRG0 241 aa12.46□□□□□ -0.42
SOX6-213ENST00000530378 UBE2Q2LH0YL09 131 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms